BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024599
         (1681 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicot...   868   0.0  
gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]     864   0.0  
gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]   858   0.0  
gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]     858   0.0  
ref|XP_002324295.1| rna-dependent RNA polymerase [Populus tricho...   858   0.0  

>gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana]
          Length = 1197

 Score =  868 bits (2243), Expect = 0.0
 Identities = 421/559 (75%), Positives = 475/559 (84%)
 Frame = -1

Query: 1681 CGRKYSFLAFSANQLRDRSAWFFAENGKISRRDIICWMGKFNNKNVAKCAARMGQCFSST 1502
            CGRKYSFLAFSANQLRDRSAWFFAE+ KI    II WMG+F+N+NVAKCAARMGQCFSST
Sbjct: 502  CGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQCFSST 561

Query: 1501 YATVEVPRDEVDLKLKDIERNGYVFSDGIGKMSPELALEVAEKLQLEDNQPCAYQIRYAG 1322
            YATVEVP  EV+ +L DIERNGYVFSDGIG +S +LALEVAEKL L  N P AYQIRYAG
Sbjct: 562  YATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLALEVAEKLHLSVNPPSAYQIRYAG 621

Query: 1321 CKGVIVWWPDKKGDDIKLSLRPSMNKFKSEHTILEICNWTRLQPGFLNRQIITLLSALNV 1142
            CKGV+  WP K  D I LSLRPSM KF S HTILEIC+WTR QPGFLNRQI+TLLS+L+V
Sbjct: 622  CKGVVACWPTKN-DGILLSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLSSLDV 680

Query: 1141 QDGIFWDMQMKMVSKLNQMLEDTDVAFDVLTASCAESGNTASIMLAAGFKPQTEPHLRGM 962
            +DGIFW+MQ +M+S LN+ML D+DVAFDV+TASCAE+GNTA+IML+AGFKPQ+EPHLRGM
Sbjct: 681  KDGIFWEMQKEMISGLNKMLVDSDVAFDVITASCAEAGNTAAIMLSAGFKPQSEPHLRGM 740

Query: 961  LSSIRVAQLEGLREKARIFVPDGRWLMGCLDELGVLEQGQCFIQVSSPSVENCFAKHGSR 782
            LSSIR +QL  LR KARIFVP GRWLMGCLDELG LEQGQCFIQVSSPS+ENCF KHG +
Sbjct: 741  LSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQGQCFIQVSSPSLENCFIKHGPK 800

Query: 781  FSETKKKLTVIKGNVVIAKNPCLHPGDVRVLQAVDVPGLEHLFDCLVFPQKGDRPHTDEA 602
            FS+ KK L V+KG VVIAKNPCLHPGDVR+L+AVDVPGL HL+DCLVFPQKGDRPH++EA
Sbjct: 801  FSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPGLHHLYDCLVFPQKGDRPHSNEA 860

Query: 601  SGSDLDGDLYFVTWDEYLIPPSKRSWPPMEYTPADAKLLQRDVRLPDIIDFFMENMVNDS 422
            SGSDLDGDLYFVTWDE LIPPSK+SW PM Y PA+ K L R V   DIIDFF +NMV +S
Sbjct: 861  SGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQLGRQVNHMDIIDFFSKNMVQES 920

Query: 421  LGTICNAHVVHADTSNYGAMDEKCIKLAELAATAVDFPKTGKFVNMPQQLRPKLYPDFMG 242
            LG ICNAHVVHAD S +GA+DEKC+KLAELAA AVDFPKTGK V MP  L+PK+YPDFMG
Sbjct: 921  LGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMG 980

Query: 241  KEDFQSYKSKKILGKLYRQIKDCNNTDVTPPSELHILPFQVPYDKDLEIPKAARFVNDAW 62
            KE+FQSYKSKKILGKLYRQ+KD  +T+    + L ++P  +PYD  LEIP +  F+ DAW
Sbjct: 981  KEEFQSYKSKKILGKLYRQVKDVCDTEGEVSAGLELVPNDIPYDSSLEIPGSTVFMGDAW 1040

Query: 61   GCKLSYDRQLNGLLGQYKV 5
             CK SYD QL+GLLGQYKV
Sbjct: 1041 NCKCSYDGQLHGLLGQYKV 1059


>gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]
          Length = 1197

 Score =  864 bits (2232), Expect = 0.0
 Identities = 417/559 (74%), Positives = 476/559 (85%)
 Frame = -1

Query: 1681 CGRKYSFLAFSANQLRDRSAWFFAENGKISRRDIICWMGKFNNKNVAKCAARMGQCFSST 1502
            CGRKYSFLAFSANQLRDRSAWFFAE+ KI    II WMG+F+N+NVAKCAARMGQCFSST
Sbjct: 502  CGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQCFSST 561

Query: 1501 YATVEVPRDEVDLKLKDIERNGYVFSDGIGKMSPELALEVAEKLQLEDNQPCAYQIRYAG 1322
            YATVEVP  EV+ +L DIERNGYVFSDGIG +S +LA+EVAEKL L  N P AYQIRYAG
Sbjct: 562  YATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLAVEVAEKLHLSVNPPSAYQIRYAG 621

Query: 1321 CKGVIVWWPDKKGDDIKLSLRPSMNKFKSEHTILEICNWTRLQPGFLNRQIITLLSALNV 1142
            CKGV+  WP K  D I+LSLRPSM KF S HTILEIC+WTR QPGFLNRQI+TLLS+L+V
Sbjct: 622  CKGVVACWPTKN-DGIRLSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLSSLDV 680

Query: 1141 QDGIFWDMQMKMVSKLNQMLEDTDVAFDVLTASCAESGNTASIMLAAGFKPQTEPHLRGM 962
            +DGIFW+MQ +M+S L++ML D+DVAFDV+TASCAE+GNTA+IML+AGFKPQ+EPHLRGM
Sbjct: 681  KDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCAEAGNTAAIMLSAGFKPQSEPHLRGM 740

Query: 961  LSSIRVAQLEGLREKARIFVPDGRWLMGCLDELGVLEQGQCFIQVSSPSVENCFAKHGSR 782
            LSSIR +QL  LR KARIFVP GRWLMGCLDELG LEQGQCFIQVSSPS+ENCF KHG +
Sbjct: 741  LSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQGQCFIQVSSPSLENCFIKHGPK 800

Query: 781  FSETKKKLTVIKGNVVIAKNPCLHPGDVRVLQAVDVPGLEHLFDCLVFPQKGDRPHTDEA 602
            FS+ KK L V+KG VVIAKNPCLHPGDVR+L+AVDVPGL HL+DCLVFPQKGDRPH++EA
Sbjct: 801  FSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPGLHHLYDCLVFPQKGDRPHSNEA 860

Query: 601  SGSDLDGDLYFVTWDEYLIPPSKRSWPPMEYTPADAKLLQRDVRLPDIIDFFMENMVNDS 422
            SGSDLDGDLYFVTWDE LIPPSK+SW PM Y PA+ K + R V   DIIDFF +NMV +S
Sbjct: 861  SGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQMGRQVNHMDIIDFFSKNMVQES 920

Query: 421  LGTICNAHVVHADTSNYGAMDEKCIKLAELAATAVDFPKTGKFVNMPQQLRPKLYPDFMG 242
            LG ICNAHVVHAD S +GA+DEKC+KLAELAA AVDFPKTGK V MP  L+PK+YPDFMG
Sbjct: 921  LGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMG 980

Query: 241  KEDFQSYKSKKILGKLYRQIKDCNNTDVTPPSELHILPFQVPYDKDLEIPKAARFVNDAW 62
            KE+FQSYKSKKILGKLYRQ+KD  +T+    + L ++P  +PYD  LEIP +  F++DAW
Sbjct: 981  KEEFQSYKSKKILGKLYRQVKDVCDTEGEVSAGLELVPNDIPYDSSLEIPGSTAFIDDAW 1040

Query: 61   GCKLSYDRQLNGLLGQYKV 5
              K SYD QL+GLLGQYKV
Sbjct: 1041 NSKCSYDGQLHGLLGQYKV 1059


>gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
          Length = 1197

 Score =  858 bits (2218), Expect = 0.0
 Identities = 414/559 (74%), Positives = 474/559 (84%)
 Frame = -1

Query: 1681 CGRKYSFLAFSANQLRDRSAWFFAENGKISRRDIICWMGKFNNKNVAKCAARMGQCFSST 1502
            CGRKYSFLAFSANQLRDRSAWFFAE+ KI    II WMG+F+N+NVAKCAARMGQCFSST
Sbjct: 502  CGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQCFSST 561

Query: 1501 YATVEVPRDEVDLKLKDIERNGYVFSDGIGKMSPELALEVAEKLQLEDNQPCAYQIRYAG 1322
            YATVEVP  EV+ +L DIERNGYVFSDGIG +S +LA+EVAEKL L  N P AYQIRYAG
Sbjct: 562  YATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLAIEVAEKLHLSVNPPAAYQIRYAG 621

Query: 1321 CKGVIVWWPDKKGDDIKLSLRPSMNKFKSEHTILEICNWTRLQPGFLNRQIITLLSALNV 1142
            CKGV+  WP K  D I+LSLRPSM KF S HTILEIC+WTR QPGFLNRQI+TLLS+L+V
Sbjct: 622  CKGVVACWPTKN-DGIRLSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLSSLDV 680

Query: 1141 QDGIFWDMQMKMVSKLNQMLEDTDVAFDVLTASCAESGNTASIMLAAGFKPQTEPHLRGM 962
            +DGIFW+MQ +M++ L++ML D+DVAFDV+TASCAE+GNTA++ML+AGFKPQ+EPHLRGM
Sbjct: 681  KDGIFWEMQKEMIAGLDKMLVDSDVAFDVITASCAEAGNTAALMLSAGFKPQSEPHLRGM 740

Query: 961  LSSIRVAQLEGLREKARIFVPDGRWLMGCLDELGVLEQGQCFIQVSSPSVENCFAKHGSR 782
            LSSIR +QL  LR KARIFVP GRWLMGCLDELG LEQGQCFIQVSSPS+ENCF KHGS+
Sbjct: 741  LSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQGQCFIQVSSPSLENCFVKHGSK 800

Query: 781  FSETKKKLTVIKGNVVIAKNPCLHPGDVRVLQAVDVPGLEHLFDCLVFPQKGDRPHTDEA 602
            FS+ KK L V+KG VVIAKNPCLHPGDVR+L+AVDVP L HL+DCLVFPQKGDRPH++EA
Sbjct: 801  FSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPSLSHLYDCLVFPQKGDRPHSNEA 860

Query: 601  SGSDLDGDLYFVTWDEYLIPPSKRSWPPMEYTPADAKLLQRDVRLPDIIDFFMENMVNDS 422
            SGSDLDGDLYFVTWDE +IPPSK+SW PM Y PA+ K L R V   DIIDFF +NMV +S
Sbjct: 861  SGSDLDGDLYFVTWDENIIPPSKKSWIPMNYEPAEVKQLGRQVNHMDIIDFFSKNMVQES 920

Query: 421  LGTICNAHVVHADTSNYGAMDEKCIKLAELAATAVDFPKTGKFVNMPQQLRPKLYPDFMG 242
            LG ICNAHVVHAD S +GA+DEKC+KLAELAA AVDFPKTGK V MP  L+PK+YPDFMG
Sbjct: 921  LGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMG 980

Query: 241  KEDFQSYKSKKILGKLYRQIKDCNNTDVTPPSELHILPFQVPYDKDLEIPKAARFVNDAW 62
            KE+FQSYKSKKILGKLYRQ+KD  + +    + L ++P  +PYD  LEI  +  F++DAW
Sbjct: 981  KEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPKDIPYDTTLEILGSTTFIDDAW 1040

Query: 61   GCKLSYDRQLNGLLGQYKV 5
              K SYD QLNGLLGQYKV
Sbjct: 1041 NSKCSYDGQLNGLLGQYKV 1059


>gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  858 bits (2217), Expect = 0.0
 Identities = 415/559 (74%), Positives = 473/559 (84%)
 Frame = -1

Query: 1681 CGRKYSFLAFSANQLRDRSAWFFAENGKISRRDIICWMGKFNNKNVAKCAARMGQCFSST 1502
            CGRKYSFLAFSANQLRDRSAWFFAE+ KI    II WMG+F+N+NVAKCAARMGQCFSST
Sbjct: 502  CGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQCFSST 561

Query: 1501 YATVEVPRDEVDLKLKDIERNGYVFSDGIGKMSPELALEVAEKLQLEDNQPCAYQIRYAG 1322
            YATVEVP  EV+ +L DIERNGYVFSDGIG +S +LA+EVAEKL L  N P AYQIRYAG
Sbjct: 562  YATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLAIEVAEKLHLSVNPPSAYQIRYAG 621

Query: 1321 CKGVIVWWPDKKGDDIKLSLRPSMNKFKSEHTILEICNWTRLQPGFLNRQIITLLSALNV 1142
            CKGV+  WP K  D I+LSLRPSM KF S HTILEIC+WTR QPGFLNRQI+TLLS+L+V
Sbjct: 622  CKGVVACWPTKN-DGIRLSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLSSLDV 680

Query: 1141 QDGIFWDMQMKMVSKLNQMLEDTDVAFDVLTASCAESGNTASIMLAAGFKPQTEPHLRGM 962
            +DGIFW+MQ +M+S L++ML D+DVAFDV+TASCAE+GNTA++ML+AGFKPQ+EPHLRGM
Sbjct: 681  KDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCAEAGNTAALMLSAGFKPQSEPHLRGM 740

Query: 961  LSSIRVAQLEGLREKARIFVPDGRWLMGCLDELGVLEQGQCFIQVSSPSVENCFAKHGSR 782
            LSSIR +QL  LR KARIFVP GRWLMGCLDELG LEQGQCFIQVSSPS+ENCF KHG +
Sbjct: 741  LSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQGQCFIQVSSPSLENCFVKHGPK 800

Query: 781  FSETKKKLTVIKGNVVIAKNPCLHPGDVRVLQAVDVPGLEHLFDCLVFPQKGDRPHTDEA 602
            FS+ KK L V+KG VVIAKNPCLHPGDVR+L+AVDVP L HL+DCLVFPQKGDRPH++EA
Sbjct: 801  FSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPSLSHLYDCLVFPQKGDRPHSNEA 860

Query: 601  SGSDLDGDLYFVTWDEYLIPPSKRSWPPMEYTPADAKLLQRDVRLPDIIDFFMENMVNDS 422
            SGSDLDGDLYFVTWDE LIPPSK+SW PM Y PA+ K L R V   DIIDFF +NMV +S
Sbjct: 861  SGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQLGRQVNHMDIIDFFSKNMVQES 920

Query: 421  LGTICNAHVVHADTSNYGAMDEKCIKLAELAATAVDFPKTGKFVNMPQQLRPKLYPDFMG 242
            LG ICNAHVVHAD S +GA+DEKC+KLAELAA AVDFPKTGK V MP  L+PK+YPDFMG
Sbjct: 921  LGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMG 980

Query: 241  KEDFQSYKSKKILGKLYRQIKDCNNTDVTPPSELHILPFQVPYDKDLEIPKAARFVNDAW 62
            KE+FQSYKSKKILGKLYRQ+KD  + +    + L ++P  +PYD  LEI  +  F++DAW
Sbjct: 981  KEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPKDIPYDTTLEILGSTTFIDDAW 1040

Query: 61   GCKLSYDRQLNGLLGQYKV 5
              K SYD QLNGLLGQYKV
Sbjct: 1041 NSKCSYDGQLNGLLGQYKV 1059


>ref|XP_002324295.1| rna-dependent RNA polymerase [Populus trichocarpa]
            gi|222865729|gb|EEF02860.1| rna-dependent RNA polymerase
            [Populus trichocarpa]
          Length = 1200

 Score =  858 bits (2216), Expect = 0.0
 Identities = 411/559 (73%), Positives = 473/559 (84%)
 Frame = -1

Query: 1681 CGRKYSFLAFSANQLRDRSAWFFAENGKISRRDIICWMGKFNNKNVAKCAARMGQCFSST 1502
            CGR+YSFLAFSANQLRD+SAWFF+E   IS  D+  WMGKF N+N+AKCAARMGQCFSST
Sbjct: 505  CGRRYSFLAFSANQLRDQSAWFFSEERNISVLDVKSWMGKFTNRNIAKCAARMGQCFSST 564

Query: 1501 YATVEVPRDEVDLKLKDIERNGYVFSDGIGKMSPELALEVAEKLQLEDNQPCAYQIRYAG 1322
            YAT+EVP +EV+  L DIERNGYVFSDGIG ++P+LA EVAEKL+L+ + PCAYQIRYAG
Sbjct: 565  YATIEVPPEEVNSDLPDIERNGYVFSDGIGIITPDLAREVAEKLKLDIDPPCAYQIRYAG 624

Query: 1321 CKGVIVWWPDKKGDDIKLSLRPSMNKFKSEHTILEICNWTRLQPGFLNRQIITLLSALNV 1142
            CKGV+  WP K GD ++LSLRPSMNKF+S HT LEIC+WTR QPGFLNRQIITLLS LNV
Sbjct: 625  CKGVVACWPGK-GDGVRLSLRPSMNKFQSNHTTLEICSWTRFQPGFLNRQIITLLSTLNV 683

Query: 1141 QDGIFWDMQMKMVSKLNQMLEDTDVAFDVLTASCAESGNTASIMLAAGFKPQTEPHLRGM 962
             D +FW MQ  MVSKLNQM  ++DVAFDVLTASCA+ GN A+IML+AGFKP  EPHLRGM
Sbjct: 684  PDAVFWKMQETMVSKLNQMFVNSDVAFDVLTASCADQGNVAAIMLSAGFKPDREPHLRGM 743

Query: 961  LSSIRVAQLEGLREKARIFVPDGRWLMGCLDELGVLEQGQCFIQVSSPSVENCFAKHGSR 782
            L+ +R AQL  LREK RIFVP GRWLMGCLDELG+LEQGQCFIQVS+ S+E CF KHG++
Sbjct: 744  LTCVRAAQLWDLREKTRIFVPSGRWLMGCLDELGMLEQGQCFIQVSNSSLEKCFMKHGAK 803

Query: 781  FSETKKKLTVIKGNVVIAKNPCLHPGDVRVLQAVDVPGLEHLFDCLVFPQKGDRPHTDEA 602
            FSE +K L VIKG VVIAKNPCLHPGDVRVL+AVDVPGL HL+DCLVFPQKG+RPHT+EA
Sbjct: 804  FSEAEKNLQVIKGTVVIAKNPCLHPGDVRVLEAVDVPGLHHLYDCLVFPQKGERPHTNEA 863

Query: 601  SGSDLDGDLYFVTWDEYLIPPSKRSWPPMEYTPADAKLLQRDVRLPDIIDFFMENMVNDS 422
            SGSDLDGDLYFVTWDE LIPPSKRSW PM+Y  A+AKLL R V   DII+FF +NMVND+
Sbjct: 864  SGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAAEAKLLARPVNHQDIIEFFAKNMVNDN 923

Query: 421  LGTICNAHVVHADTSNYGAMDEKCIKLAELAATAVDFPKTGKFVNMPQQLRPKLYPDFMG 242
            LG ICNAHVVHAD S YGA D+ C+ LAELAATAVDFPKTGK V+MP  L+PK+YPDFMG
Sbjct: 924  LGAICNAHVVHADLSEYGATDKNCLTLAELAATAVDFPKTGKVVSMPPYLKPKMYPDFMG 983

Query: 241  KEDFQSYKSKKILGKLYRQIKDCNNTDVTPPSELHILPFQVPYDKDLEIPKAARFVNDAW 62
            KE++QSYKS+KILG+LYRQIKD  + DV   SEL+++P  +PYD DLE+  A+ +++DAW
Sbjct: 984  KEEYQSYKSEKILGRLYRQIKDAYDEDVAASSELNLVPGDIPYDSDLEVVGASDYISDAW 1043

Query: 61   GCKLSYDRQLNGLLGQYKV 5
              K SYD QLNGLL QYKV
Sbjct: 1044 DQKCSYDGQLNGLLSQYKV 1062