BLASTX nr result

ID: Atractylodes21_contig00024596 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024596
         (781 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267239.2| PREDICTED: ATP-dependent DNA helicase DDM1-l...   418   e-115
emb|CBI17533.3| unnamed protein product [Vitis vinifera]              418   e-115
ref|XP_002310223.1| chromatin remodeling complex subunit [Populu...   417   e-114
ref|XP_002521606.1| ISWI chromatin remodeling complex ATPase ISW...   414   e-113
ref|XP_002325643.1| chromatin remodeling complex subunit [Populu...   412   e-113

>ref|XP_002267239.2| PREDICTED: ATP-dependent DNA helicase DDM1-like [Vitis vinifera]
          Length = 759

 Score =  418 bits (1075), Expect = e-115
 Identities = 203/240 (84%), Positives = 225/240 (93%)
 Frame = +1

Query: 1    EKVDTGRGMKGKLNNLMVQLRKNCNHPDLLEAAFEGSCFYPPVEQIVGQCGKFQLLERLL 180
            EK  TGRG+KGKLNNLMVQLRKNCNHPDLLE+AF+GS  YPPVEQIV QCGKF+LL+RLL
Sbjct: 463  EKASTGRGVKGKLNNLMVQLRKNCNHPDLLESAFDGSYLYPPVEQIVEQCGKFRLLDRLL 522

Query: 181  QKLFARKHKVLIFSQWTKILDIMHYYFSEKGMEVCRIDGSVKLEERRRQIQEFNDLNSDY 360
             +LFARKHKVLIFSQWTKILDIM YYFSEKG+EVCRIDGSV+L+ER+RQI+EFND+NS+ 
Sbjct: 523  ARLFARKHKVLIFSQWTKILDIMEYYFSEKGLEVCRIDGSVRLDERKRQIEEFNDMNSNC 582

Query: 361  RIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQS 540
            R+FLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQS
Sbjct: 583  RVFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQS 642

Query: 541  VEGRILKRAFSKLKLEHVVIGKGQFQQERTKANCTEVMEEEDMLALLKDSENPEDKMIQT 720
            +EGR+LKRAFSKLKLEHVVIGKGQFQQER K N  +V+EEED+L LL+D E+ EDK+IQT
Sbjct: 643  IEGRMLKRAFSKLKLEHVVIGKGQFQQERIKPN-MDVLEEEDLLQLLQDQEDSEDKLIQT 701


>emb|CBI17533.3| unnamed protein product [Vitis vinifera]
          Length = 800

 Score =  418 bits (1075), Expect = e-115
 Identities = 203/240 (84%), Positives = 225/240 (93%)
 Frame = +1

Query: 1    EKVDTGRGMKGKLNNLMVQLRKNCNHPDLLEAAFEGSCFYPPVEQIVGQCGKFQLLERLL 180
            EK  TGRG+KGKLNNLMVQLRKNCNHPDLLE+AF+GS  YPPVEQIV QCGKF+LL+RLL
Sbjct: 504  EKASTGRGVKGKLNNLMVQLRKNCNHPDLLESAFDGSYLYPPVEQIVEQCGKFRLLDRLL 563

Query: 181  QKLFARKHKVLIFSQWTKILDIMHYYFSEKGMEVCRIDGSVKLEERRRQIQEFNDLNSDY 360
             +LFARKHKVLIFSQWTKILDIM YYFSEKG+EVCRIDGSV+L+ER+RQI+EFND+NS+ 
Sbjct: 564  ARLFARKHKVLIFSQWTKILDIMEYYFSEKGLEVCRIDGSVRLDERKRQIEEFNDMNSNC 623

Query: 361  RIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQS 540
            R+FLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQS
Sbjct: 624  RVFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQS 683

Query: 541  VEGRILKRAFSKLKLEHVVIGKGQFQQERTKANCTEVMEEEDMLALLKDSENPEDKMIQT 720
            +EGR+LKRAFSKLKLEHVVIGKGQFQQER K N  +V+EEED+L LL+D E+ EDK+IQT
Sbjct: 684  IEGRMLKRAFSKLKLEHVVIGKGQFQQERIKPN-MDVLEEEDLLQLLQDQEDSEDKLIQT 742


>ref|XP_002310223.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222853126|gb|EEE90673.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 754

 Score =  417 bits (1071), Expect = e-114
 Identities = 201/240 (83%), Positives = 222/240 (92%)
 Frame = +1

Query: 1    EKVDTGRGMKGKLNNLMVQLRKNCNHPDLLEAAFEGSCFYPPVEQIVGQCGKFQLLERLL 180
            EK+DTGRGMKG+L NLMVQLRKNC HPDLLE+AF+GS FYPPVEQIV QCGKF+LL++LL
Sbjct: 457  EKMDTGRGMKGRLTNLMVQLRKNCYHPDLLESAFDGSYFYPPVEQIVEQCGKFRLLDKLL 516

Query: 181  QKLFARKHKVLIFSQWTKILDIMHYYFSEKGMEVCRIDGSVKLEERRRQIQEFNDLNSDY 360
             +LFA KHKVLIFSQWTK+LDIM YYFSEKG EVCRIDGSV L+ER+RQI+EFND NS Y
Sbjct: 517  NRLFALKHKVLIFSQWTKVLDIMDYYFSEKGFEVCRIDGSVNLDERKRQIEEFNDENSQY 576

Query: 361  RIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQS 540
            R+FLLSTRAGGLGINLT+ADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQS
Sbjct: 577  RVFLLSTRAGGLGINLTSADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQS 636

Query: 541  VEGRILKRAFSKLKLEHVVIGKGQFQQERTKANCTEVMEEEDMLALLKDSENPEDKMIQT 720
            +EGRILKRAFSKLKLEHVVIGKGQF  E+TK+  TEVMEE+D+LALL+D E  EDK+IQT
Sbjct: 637  IEGRILKRAFSKLKLEHVVIGKGQFHLEQTKSKGTEVMEEDDILALLRDEETAEDKLIQT 696


>ref|XP_002521606.1| ISWI chromatin remodeling complex ATPase ISW1, putative [Ricinus
            communis] gi|223539284|gb|EEF40877.1| ISWI chromatin
            remodeling complex ATPase ISW1, putative [Ricinus
            communis]
          Length = 788

 Score =  414 bits (1064), Expect = e-113
 Identities = 202/235 (85%), Positives = 220/235 (93%)
 Frame = +1

Query: 16   GRGMKGKLNNLMVQLRKNCNHPDLLEAAFEGSCFYPPVEQIVGQCGKFQLLERLLQKLFA 195
            G GMKGKLNNLM+QLRKNCNHPDLLE+AF+GS FYPPVEQIV QCGKF+LLERLL +LFA
Sbjct: 497  GHGMKGKLNNLMIQLRKNCNHPDLLESAFDGSNFYPPVEQIVEQCGKFRLLERLLNRLFA 556

Query: 196  RKHKVLIFSQWTKILDIMHYYFSEKGMEVCRIDGSVKLEERRRQIQEFNDLNSDYRIFLL 375
             KHKVLIFSQWTKILDIM YYFSEKG+EVCRIDGSVKL+ER+RQI+EFN+++S+YRIFLL
Sbjct: 557  LKHKVLIFSQWTKILDIMDYYFSEKGLEVCRIDGSVKLDERKRQIEEFNNVDSNYRIFLL 616

Query: 376  STRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRI 555
            STRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRI
Sbjct: 617  STRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRI 676

Query: 556  LKRAFSKLKLEHVVIGKGQFQQERTKANCTEVMEEEDMLALLKDSENPEDKMIQT 720
            LKRAFSKLKLEHVVIGKGQF QER K+N    MEEED+LALL++ E  EDK+IQT
Sbjct: 677  LKRAFSKLKLEHVVIGKGQFHQERMKSNSIVDMEEEDILALLRNEETAEDKLIQT 731


>ref|XP_002325643.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222862518|gb|EEF00025.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 719

 Score =  412 bits (1058), Expect = e-113
 Identities = 204/242 (84%), Positives = 223/242 (92%), Gaps = 2/242 (0%)
 Frame = +1

Query: 1    EKVDTG--RGMKGKLNNLMVQLRKNCNHPDLLEAAFEGSCFYPPVEQIVGQCGKFQLLER 174
            EK+DTG  RGMKG+LNNLM+QLRKNC HPDLLE+AF+GS FYPPVEQIVG+CGKFQLL+R
Sbjct: 422  EKLDTGIRRGMKGRLNNLMIQLRKNCYHPDLLESAFDGSYFYPPVEQIVGKCGKFQLLDR 481

Query: 175  LLQKLFARKHKVLIFSQWTKILDIMHYYFSEKGMEVCRIDGSVKLEERRRQIQEFNDLNS 354
            LL +LFA +HKVLIFSQWTKILDIM YYFSEKG EVCRIDGSVKL+ER++QIQEFND NS
Sbjct: 482  LLNRLFALQHKVLIFSQWTKILDIMDYYFSEKGFEVCRIDGSVKLDERKKQIQEFNDENS 541

Query: 355  DYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATA 534
             +RIFLLSTRAGGLGINLT+ADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRL TA
Sbjct: 542  QFRIFLLSTRAGGLGINLTSADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLTTA 601

Query: 535  QSVEGRILKRAFSKLKLEHVVIGKGQFQQERTKANCTEVMEEEDMLALLKDSENPEDKMI 714
            QSVEGRILKRAFSKLKLEHVVIGKGQF QERTK+  T++MEE  MLALL+D E  EDK+I
Sbjct: 602  QSVEGRILKRAFSKLKLEHVVIGKGQFHQERTKSTGTDLMEE--MLALLRDEETAEDKLI 659

Query: 715  QT 720
            QT
Sbjct: 660  QT 661


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