BLASTX nr result

ID: Atractylodes21_contig00024587 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024587
         (1518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511871.1| ubiquitin-protein ligase, putative [Ricinus ...   422   e-115
ref|XP_003551663.1| PREDICTED: SKP1-like protein 21-like [Glycin...   416   e-114
emb|CBI40385.3| unnamed protein product [Vitis vinifera]              415   e-113
ref|XP_002275024.1| PREDICTED: SKP1-like protein 21-like [Vitis ...   414   e-113
emb|CBI22695.3| unnamed protein product [Vitis vinifera]              411   e-112

>ref|XP_002511871.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223549051|gb|EEF50540.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 359

 Score =  422 bits (1084), Expect = e-115
 Identities = 228/347 (65%), Positives = 251/347 (72%), Gaps = 5/347 (1%)
 Frame = +2

Query: 221  EMMKSYIWLQTADGSIQQVEQEVAIFCPLICHEI-HAGMGSSKAYPISLPARVNPVTLSL 397
            +MMKSYIWLQTADGSIQQVEQEVA+FCP+ICHEI   G+GSSK Y ISLP RVNP  LSL
Sbjct: 4    QMMKSYIWLQTADGSIQQVEQEVAMFCPMICHEIIQKGLGSSKNYAISLPQRVNPAMLSL 63

Query: 398  ILDYCRFHQVPGRSNKERKSFDEKFIRMDTNRLCELTSAADSLQLKPLVDLTSRALARMI 577
            ILDYCRFHQVPGRSNKERKSFDEKFIRMDT RLCELTSAADSLQLKPLVDLTSRALAR+I
Sbjct: 64   ILDYCRFHQVPGRSNKERKSFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARII 123

Query: 578  EGKTPEEIRETFHIPDDLTEEEKLEPLKNITDDPRIRLLNRLYAXXXXXXXXXXXXXXXX 757
            EGKTPEEIRE FH+PDDLTEEEKLEPLKN TDDPRIRLLNRLYA                
Sbjct: 124  EGKTPEEIREIFHLPDDLTEEEKLEPLKNTTDDPRIRLLNRLYAKKRKELKERQKLKNVE 183

Query: 758  XXADHVDDRSVDELLSFINGENGDSKEVKTPXXXXXXXXXXXXXXXAPVCTISNSSSSPN 937
               + VDDRSVD+LLSFING N  SK +KTP                        S+S N
Sbjct: 184  AQEECVDDRSVDDLLSFINGGNKVSKGLKTPKNKKKQQRRKD----------QQKSTSLN 233

Query: 938  NA----TKESNGISSVGHDDRVKGHCLPDINDLLKLQDSEDDRFGLEDEFDDCDIGDGID 1105
             A     KE+NG++S  H   V        ++  K Q  ED+ F  + EFDD DI D ID
Sbjct: 234  EAIETHKKETNGLNSSCHTAEVDNELQSITSETSKSQGVEDEIFAPKVEFDDVDIDDEID 293

Query: 1106 PEIKEQIDREVEDFARRLNSDWPERVQELLSLGQERRPSLYTVNGNG 1246
            P +KE+IDREVEDFARRLNSDWPER+QELLSL QE+RP  + +NGNG
Sbjct: 294  PALKEKIDREVEDFARRLNSDWPERMQELLSLSQEKRPGHFAINGNG 340


>ref|XP_003551663.1| PREDICTED: SKP1-like protein 21-like [Glycine max]
          Length = 383

 Score =  416 bits (1069), Expect = e-114
 Identities = 223/361 (61%), Positives = 259/361 (71%), Gaps = 3/361 (0%)
 Frame = +2

Query: 194  MSEPD--VIKPEMMKSYIWLQTADGSIQQVEQEVAIFCPLICHEI-HAGMGSSKAYPISL 364
            MSE D  VIKPEMMK YIWL+T+DGSIQQVEQE+A++CPLIC EI   GMGSSK+  I L
Sbjct: 1    MSEIDMAVIKPEMMKPYIWLETSDGSIQQVEQEIAMYCPLICQEIIQKGMGSSKSCAICL 60

Query: 365  PARVNPVTLSLILDYCRFHQVPGRSNKERKSFDEKFIRMDTNRLCELTSAADSLQLKPLV 544
            P RV+PVTLSLILDYCRFHQVPGRSNKERKS+DEKFIRMDT RLCELTSAADSLQLKPLV
Sbjct: 61   PQRVSPVTLSLILDYCRFHQVPGRSNKERKSYDEKFIRMDTKRLCELTSAADSLQLKPLV 120

Query: 545  DLTSRALARMIEGKTPEEIRETFHIPDDLTEEEKLEPLKNITDDPRIRLLNRLYAXXXXX 724
            DLTSRALAR+IEGK+PEEIRE FH+PDDLTEEEKLEPLKN TDDPRIRLLNRLYA     
Sbjct: 121  DLTSRALARIIEGKSPEEIREIFHLPDDLTEEEKLEPLKNTTDDPRIRLLNRLYAKKRKE 180

Query: 725  XXXXXXXXXXXXXADHVDDRSVDELLSFINGENGDSKEVKTPXXXXXXXXXXXXXXXAPV 904
                          +HVD+RSVD+LLSFING +GD KEVKT                   
Sbjct: 181  LRERERLKNVEVEEEHVDERSVDDLLSFINGNDGDPKEVKTSKNKKKNRR---------- 230

Query: 905  CTISNSSSSPNNATKESNGISSVGHDDRVKGHCLPDINDLLKLQDSEDDRFGLEDEFDDC 1084
                      N++ KE++ ++ V  + +   H   + + + +  +S  +      EFDD 
Sbjct: 231  ---KKEQQQKNSSLKEASEVNKVEVNGQSIRHQSAEADRIAETSNSHTEDVFAHREFDDG 287

Query: 1085 DIGDGIDPEIKEQIDREVEDFARRLNSDWPERVQELLSLGQERRPSLYTVNGNGCSAKRS 1264
            DI DGIDP +KE+IDREVEDFARRLNSDWPER+QELLS GQER+  L+T NGN    + +
Sbjct: 288  DIDDGIDPALKEKIDREVEDFARRLNSDWPERMQELLSSGQERKMMLFTPNGNSFLRRNA 347

Query: 1265 S 1267
            S
Sbjct: 348  S 348


>emb|CBI40385.3| unnamed protein product [Vitis vinifera]
          Length = 351

 Score =  415 bits (1067), Expect = e-113
 Identities = 229/354 (64%), Positives = 255/354 (72%), Gaps = 3/354 (0%)
 Frame = +2

Query: 194  MSEPD--VIKPEMMKSYIWLQTADGSIQQVEQEVAIFCPLICHEI-HAGMGSSKAYPISL 364
            M+E D  VIKPEMMKSYIWLQTADGSIQ+VEQEVA+FCPLIC EI   GMGSSK   I+L
Sbjct: 1    MAEVDTAVIKPEMMKSYIWLQTADGSIQEVEQEVAMFCPLICDEIIQRGMGSSKNNAITL 60

Query: 365  PARVNPVTLSLILDYCRFHQVPGRSNKERKSFDEKFIRMDTNRLCELTSAADSLQLKPLV 544
            P RVNPV LSL+LDYCRFHQV GRSNKERKSFDEKFIRMDT RLCELTSAADSLQLKPLV
Sbjct: 61   PQRVNPVMLSLVLDYCRFHQVIGRSNKERKSFDEKFIRMDTKRLCELTSAADSLQLKPLV 120

Query: 545  DLTSRALARMIEGKTPEEIRETFHIPDDLTEEEKLEPLKNITDDPRIRLLNRLYAXXXXX 724
            DLTSRALARMIEGKTPEEIRETFH+PDDLTEEEKLEPLKNITDDPRIRLLNRLYA     
Sbjct: 121  DLTSRALARMIEGKTPEEIRETFHLPDDLTEEEKLEPLKNITDDPRIRLLNRLYARKRKE 180

Query: 725  XXXXXXXXXXXXXADHVDDRSVDELLSFINGENGDSKEVKTPXXXXXXXXXXXXXXXAPV 904
                          + VD RSVD+LLSFING N DSK V T                   
Sbjct: 181  LKERERLKNVEVEEECVDYRSVDDLLSFINGGNEDSKGVGTSKNKKKNRRRKDQQK---- 236

Query: 905  CTISNSSSSPNNATKESNGISSVGHDDRVKGHCLPDINDLLKLQDSEDDRFGLEDEFDDC 1084
               S++ +      KESN + SV HD  +  +     ++  KLQD +DD F  +  F+D 
Sbjct: 237  -NTSSNHAIETTHKKESNCLKSVHHDVEINNNLQSSPSERSKLQDIQDDMFSPQANFEDG 295

Query: 1085 DIGDGIDPEIKEQIDREVEDFARRLNSDWPERVQELLSLGQERRPSLYTVNGNG 1246
            DI D  DP I+E+IDREVEDF R LNSDWPER+QE+LSLG+ER+P    +NGNG
Sbjct: 296  DIDDEFDPAIQEKIDREVEDFERILNSDWPERMQEILSLGRERKP----INGNG 345


>ref|XP_002275024.1| PREDICTED: SKP1-like protein 21-like [Vitis vinifera]
          Length = 388

 Score =  414 bits (1064), Expect = e-113
 Identities = 228/354 (64%), Positives = 256/354 (72%), Gaps = 3/354 (0%)
 Frame = +2

Query: 194  MSEPD--VIKPEMMKSYIWLQTADGSIQQVEQEVAIFCPLICHEI-HAGMGSSKAYPISL 364
            M+E D  VIKPEMMKSYIWLQTADGSIQ+VEQEVA+FCPLIC EI   GMGSSK   I+L
Sbjct: 1    MAEVDTAVIKPEMMKSYIWLQTADGSIQEVEQEVAMFCPLICDEIIQRGMGSSKNNAITL 60

Query: 365  PARVNPVTLSLILDYCRFHQVPGRSNKERKSFDEKFIRMDTNRLCELTSAADSLQLKPLV 544
            P RVNPV LSL+LDYCRFHQV GRSNKERKSFDEKFIRMDT RLCELTSAADSLQLKPLV
Sbjct: 61   PQRVNPVMLSLVLDYCRFHQVIGRSNKERKSFDEKFIRMDTKRLCELTSAADSLQLKPLV 120

Query: 545  DLTSRALARMIEGKTPEEIRETFHIPDDLTEEEKLEPLKNITDDPRIRLLNRLYAXXXXX 724
            DLTSRALARMIEGKTPEEIRETFH+PDDLTEEEKLEPLKNITDDPRIRLLNRLYA     
Sbjct: 121  DLTSRALARMIEGKTPEEIRETFHLPDDLTEEEKLEPLKNITDDPRIRLLNRLYARKRKE 180

Query: 725  XXXXXXXXXXXXXADHVDDRSVDELLSFINGENGDSKEVKTPXXXXXXXXXXXXXXXAPV 904
                          + VD RSVD+LLSFING N DSK V T                   
Sbjct: 181  LKERERLKNVEVEEECVDYRSVDDLLSFINGGNEDSKGVGTSKNKKKNRRRKDQQKN--- 237

Query: 905  CTISNSSSSPNNATKESNGISSVGHDDRVKGHCLPDINDLLKLQDSEDDRFGLEDEFDDC 1084
               ++S+ +     K+SN + SV HD  +  +     ++  KLQD +DD F  +  F+D 
Sbjct: 238  ---TSSNHAIETTHKKSNCLKSVHHDVEINNNLQSSPSERSKLQDIQDDMFSPQANFEDG 294

Query: 1085 DIGDGIDPEIKEQIDREVEDFARRLNSDWPERVQELLSLGQERRPSLYTVNGNG 1246
            DI D  DP I+E+IDREVEDF R LNSDWPER+QE+LSLG+ER+P    +NGNG
Sbjct: 295  DIDDEFDPAIQEKIDREVEDFERILNSDWPERMQEILSLGRERKP----INGNG 344


>emb|CBI22695.3| unnamed protein product [Vitis vinifera]
          Length = 358

 Score =  411 bits (1056), Expect = e-112
 Identities = 221/354 (62%), Positives = 257/354 (72%), Gaps = 1/354 (0%)
 Frame = +2

Query: 209  VIKPEMMKSYIWLQTADGSIQQVEQEVAIFCPLICHEI-HAGMGSSKAYPISLPARVNPV 385
            V+KPEM KSYIWLQTADGSIQQVE+EVA+FCP+IC EI   GMGSSK Y ISLP RVNP 
Sbjct: 8    VVKPEM-KSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPA 66

Query: 386  TLSLILDYCRFHQVPGRSNKERKSFDEKFIRMDTNRLCELTSAADSLQLKPLVDLTSRAL 565
             L LILDYCRFHQVPGRSNKERKSFDEKFIRMDT +LCELTSAADSLQLKPLVDLTSRAL
Sbjct: 67   ILGLILDYCRFHQVPGRSNKERKSFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRAL 126

Query: 566  ARMIEGKTPEEIRETFHIPDDLTEEEKLEPLKNITDDPRIRLLNRLYAXXXXXXXXXXXX 745
            AR+IEGKTPEEIRETFH+PDDLTEEEKLEPL+NITDDPRIRLLNRLYA            
Sbjct: 127  ARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELKEREKL 186

Query: 746  XXXXXXADHVDDRSVDELLSFINGENGDSKEVKTPXXXXXXXXXXXXXXXAPVCTISNSS 925
                   + VD+RSVD+LLSFINGE+GDSK V+                       S+S+
Sbjct: 187  KNVEVEEERVDERSVDDLLSFINGEDGDSKGVRASKNKKKNRRRKDQMKD------SSSN 240

Query: 926  SSPNNATKESNGISSVGHDDRVKGHCLPDINDLLKLQDSEDDRFGLEDEFDDCDIGDGID 1105
            +   +  KE +G+ +  H+       +   +   KLQ+     F  + EFDD DI D +D
Sbjct: 241  NVNGDHKKELDGVHTSCHNAEADEMLVSTPSKTSKLQELPASTFSPKLEFDDGDIDDELD 300

Query: 1106 PEIKEQIDREVEDFARRLNSDWPERVQELLSLGQERRPSLYTVNGNGCSAKRSS 1267
            P +KEQ+DREVEDFARRLNSDWPER+QE+LSLGQ+RR    ++NGNG + + +S
Sbjct: 301  PAMKEQLDREVEDFARRLNSDWPERMQEILSLGQQRRLVPISMNGNGSAHRYTS 354


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