BLASTX nr result

ID: Atractylodes21_contig00024536 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024536
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536728.1| PREDICTED: DDB1- and CUL4-associated factor ...   232   3e-59
ref|XP_003555854.1| PREDICTED: DDB1- and CUL4-associated factor ...   226   1e-57
ref|XP_003555853.1| PREDICTED: DDB1- and CUL4-associated factor ...   226   1e-57
gb|ACU19502.1| unknown [Glycine max]                                  223   1e-56
ref|XP_002521240.1| WD-repeat protein, putative [Ricinus communi...   217   9e-55

>ref|XP_003536728.1| PREDICTED: DDB1- and CUL4-associated factor 8-like [Glycine max]
          Length = 497

 Score =  232 bits (591), Expect = 3e-59
 Identities = 106/139 (76%), Positives = 120/139 (86%), Gaps = 1/139 (0%)
 Frame = +3

Query: 3   CAADGQVRHAMISERGEVEPKLLGKHQGRAHKLANEPGSPHIFYTCGEDGLVQHFDLRTG 182
           CAADGQVRHA I E G VE K L KHQGRAHKLA EPGSPHIFYTCGEDGLVQHFDLRTG
Sbjct: 118 CAADGQVRHAQILENGRVETKCLAKHQGRAHKLAVEPGSPHIFYTCGEDGLVQHFDLRTG 177

Query: 183 VATELFSCQPVPDR-SFVGVVNLNSIAIDPRNPNLFVIAGSDEFTRLYDIRQYRWDGSAD 359
            ATELF+CQP+ DR S++ V++LN+IAIDPRNPNLF +AGSDE+ RLYDIR+Y+WDGS D
Sbjct: 178 AATELFTCQPIKDRWSYMPVIHLNAIAIDPRNPNLFAVAGSDEYARLYDIRRYKWDGSTD 237

Query: 360 FGKPVDHFCPRHLIGDENL 416
           FG+P D FCP HLIGD+ +
Sbjct: 238 FGQPTDFFCPPHLIGDQQV 256


>ref|XP_003555854.1| PREDICTED: DDB1- and CUL4-associated factor 8-like isoform 2
           [Glycine max]
          Length = 490

 Score =  226 bits (576), Expect = 1e-57
 Identities = 103/139 (74%), Positives = 119/139 (85%), Gaps = 1/139 (0%)
 Frame = +3

Query: 3   CAADGQVRHAMISERGEVEPKLLGKHQGRAHKLANEPGSPHIFYTCGEDGLVQHFDLRTG 182
           CAADGQVRHA + E G VE K L KHQGRAHKLA EPGSPHIFYTCGEDGLVQ FDLRTG
Sbjct: 110 CAADGQVRHAQLLENGRVETKCLAKHQGRAHKLAIEPGSPHIFYTCGEDGLVQRFDLRTG 169

Query: 183 VATELFSCQPVPDR-SFVGVVNLNSIAIDPRNPNLFVIAGSDEFTRLYDIRQYRWDGSAD 359
            ATELF+CQP+ DR S++ V++LN+IAIDPRNPNLF +AGSDE+ RLYDIR+Y+WDGS D
Sbjct: 170 AATELFTCQPIKDRWSYMPVIHLNAIAIDPRNPNLFAVAGSDEYARLYDIRKYKWDGSTD 229

Query: 360 FGKPVDHFCPRHLIGDENL 416
           FG+P + FCP HLIGD+ +
Sbjct: 230 FGQPTNFFCPPHLIGDQQV 248


>ref|XP_003555853.1| PREDICTED: DDB1- and CUL4-associated factor 8-like isoform 1
           [Glycine max]
          Length = 489

 Score =  226 bits (576), Expect = 1e-57
 Identities = 103/139 (74%), Positives = 119/139 (85%), Gaps = 1/139 (0%)
 Frame = +3

Query: 3   CAADGQVRHAMISERGEVEPKLLGKHQGRAHKLANEPGSPHIFYTCGEDGLVQHFDLRTG 182
           CAADGQVRHA + E G VE K L KHQGRAHKLA EPGSPHIFYTCGEDGLVQ FDLRTG
Sbjct: 110 CAADGQVRHAQLLENGRVETKCLAKHQGRAHKLAIEPGSPHIFYTCGEDGLVQRFDLRTG 169

Query: 183 VATELFSCQPVPDR-SFVGVVNLNSIAIDPRNPNLFVIAGSDEFTRLYDIRQYRWDGSAD 359
            ATELF+CQP+ DR S++ V++LN+IAIDPRNPNLF +AGSDE+ RLYDIR+Y+WDGS D
Sbjct: 170 AATELFTCQPIKDRWSYMPVIHLNAIAIDPRNPNLFAVAGSDEYARLYDIRKYKWDGSTD 229

Query: 360 FGKPVDHFCPRHLIGDENL 416
           FG+P + FCP HLIGD+ +
Sbjct: 230 FGQPTNFFCPPHLIGDQQV 248


>gb|ACU19502.1| unknown [Glycine max]
          Length = 489

 Score =  223 bits (569), Expect = 1e-56
 Identities = 102/139 (73%), Positives = 118/139 (84%), Gaps = 1/139 (0%)
 Frame = +3

Query: 3   CAADGQVRHAMISERGEVEPKLLGKHQGRAHKLANEPGSPHIFYTCGEDGLVQHFDLRTG 182
           CAADGQVRHA + E G VE K L KHQGRAHKLA EPGSPHIFYTCGEDGLVQ FDLRTG
Sbjct: 110 CAADGQVRHAQLLENGRVETKCLAKHQGRAHKLAIEPGSPHIFYTCGEDGLVQRFDLRTG 169

Query: 183 VATELFSCQPVPDR-SFVGVVNLNSIAIDPRNPNLFVIAGSDEFTRLYDIRQYRWDGSAD 359
            ATELF+CQP+ DR S++ V++LN+IAIDPRNPNLF +AGSDE+ RLYDIR+Y+WDGS  
Sbjct: 170 AATELFTCQPIKDRWSYMPVIHLNAIAIDPRNPNLFAVAGSDEYARLYDIRKYKWDGSTG 229

Query: 360 FGKPVDHFCPRHLIGDENL 416
           FG+P + FCP HLIGD+ +
Sbjct: 230 FGQPTNFFCPPHLIGDQQV 248


>ref|XP_002521240.1| WD-repeat protein, putative [Ricinus communis]
           gi|223539508|gb|EEF41096.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 482

 Score =  217 bits (552), Expect = 9e-55
 Identities = 102/139 (73%), Positives = 116/139 (83%), Gaps = 1/139 (0%)
 Frame = +3

Query: 3   CAADGQVRHAMISERGEVEPKLLGKHQGRAHKLANEPGSPHIFYTCGEDGLVQHFDLRTG 182
           CAADGQVR A I E G VE  LL KHQGRAHKLA EPGSP+I YTCGEDGLVQHFDLRT 
Sbjct: 116 CAADGQVRFAQILECGAVETTLLAKHQGRAHKLAIEPGSPYILYTCGEDGLVQHFDLRTR 175

Query: 183 VATELFSCQPVPD-RSFVGVVNLNSIAIDPRNPNLFVIAGSDEFTRLYDIRQYRWDGSAD 359
            ATELFSC+P+ D R ++ VV+LN+I IDPRNPNLF +AGSDE+TRLYDIR Y+WDGS +
Sbjct: 176 RATELFSCRPIDDRREYMPVVHLNAITIDPRNPNLFAVAGSDEYTRLYDIRMYKWDGSTE 235

Query: 360 FGKPVDHFCPRHLIGDENL 416
           FG+P D+FCP HLIGDE +
Sbjct: 236 FGQPTDYFCPPHLIGDERV 254


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