BLASTX nr result

ID: Atractylodes21_contig00024532 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024532
         (726 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632321.1| PREDICTED: CST complex subunit STN1-like [Vi...   198   8e-49
ref|XP_002307601.1| predicted protein [Populus trichocarpa] gi|2...   190   3e-46
ref|XP_002524745.1| conserved hypothetical protein [Ricinus comm...   187   1e-45
ref|XP_003612019.1| CST complex subunit STN1 [Medicago truncatul...   174   2e-41
gb|AFK40847.1| unknown [Medicago truncatula]                          171   1e-40

>ref|XP_003632321.1| PREDICTED: CST complex subunit STN1-like [Vitis vinifera]
           gi|147810449|emb|CAN65336.1| hypothetical protein
           VITISV_023849 [Vitis vinifera]
          Length = 165

 Score =  198 bits (504), Expect = 8e-49
 Identities = 98/159 (61%), Positives = 120/159 (75%), Gaps = 4/159 (2%)
 Frame = -3

Query: 664 LRDTHVKLLAFDXXXXXXXXXXXNA----VCRKGTLLISRAETLGVVTSREHKPDRFLRF 497
           L +THVKLLAFD           ++      R+GT L SRAETLG VTSRE KP +FL+F
Sbjct: 5   LYNTHVKLLAFDLLSLTQTPSPSSSDPISFSRRGTPL-SRAETLGTVTSRELKPHKFLKF 63

Query: 496 TIDDGTGCIPCVLWLNQLTSPYFSRRSPPDVRFIAEAARNFASLIQIGVSARVRGKVTVY 317
           T+DDGTGC+PCVLWLN L+SPYFSRR+P DVR IA+ A   AS +++GV  RVRG++T Y
Sbjct: 64  TVDDGTGCVPCVLWLNHLSSPYFSRRNPADVRLIADLAEYQASEVKLGVLVRVRGRITAY 123

Query: 316 RGKLQLTVSNVFIERDPNAETLHWLQCIRLARKCYDIVP 200
           RG +Q+TVSNV +ERDPN E LHWL CI+LARKCYD++P
Sbjct: 124 RGTVQITVSNVIVERDPNMEILHWLDCIKLARKCYDVMP 162


>ref|XP_002307601.1| predicted protein [Populus trichocarpa] gi|222857050|gb|EEE94597.1|
           predicted protein [Populus trichocarpa]
          Length = 166

 Score =  190 bits (482), Expect = 3e-46
 Identities = 95/160 (59%), Positives = 118/160 (73%), Gaps = 4/160 (2%)
 Frame = -3

Query: 670 EALRDTHVKLLAFDXXXXXXXXXXXN----AVCRKGTLLISRAETLGVVTSREHKPDRFL 503
           + L++THVKLLAFD                   RK T  ISR E LGV+TSRE KP++FL
Sbjct: 3   QRLQNTHVKLLAFDLLSLAQTPSFSTYDPITFTRKNTT-ISRTEILGVITSRELKPNKFL 61

Query: 502 RFTIDDGTGCIPCVLWLNQLTSPYFSRRSPPDVRFIAEAARNFASLIQIGVSARVRGKVT 323
           +FTIDDGTGC+ CVLWLNQLTSPYFSRR+P +V+ IA+ A +FAS I+IG+ ARVRG++ 
Sbjct: 62  KFTIDDGTGCVTCVLWLNQLTSPYFSRRNPANVKLIADMAAHFASEIKIGLVARVRGRIA 121

Query: 322 VYRGKLQLTVSNVFIERDPNAETLHWLQCIRLARKCYDIV 203
            YRG +Q+TVS+V +ERDPN E  HWL CIRLAR CY++V
Sbjct: 122 GYRGAVQVTVSDVVVERDPNVEAFHWLDCIRLARNCYNVV 161


>ref|XP_002524745.1| conserved hypothetical protein [Ricinus communis]
           gi|223535929|gb|EEF37588.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 166

 Score =  187 bits (476), Expect = 1e-45
 Identities = 93/162 (57%), Positives = 113/162 (69%), Gaps = 3/162 (1%)
 Frame = -3

Query: 670 EALRDTHVKLLAFDXXXXXXXXXXXNA---VCRKGTLLISRAETLGVVTSREHKPDRFLR 500
           +  ++ HVKLLA D            +            SRAE LG+VTS EHKP +FL+
Sbjct: 3   QKFQNIHVKLLALDLVSLTQTPPFSPSDPISFSHANKSFSRAEILGIVTSCEHKPHKFLK 62

Query: 499 FTIDDGTGCIPCVLWLNQLTSPYFSRRSPPDVRFIAEAARNFASLIQIGVSARVRGKVTV 320
           FTIDDGTGC+ C+LWLNQLTSPYFSRRS P VR IA  A +FASLI+IGV ARVRG++T 
Sbjct: 63  FTIDDGTGCVSCILWLNQLTSPYFSRRSTPAVRLIASTATHFASLIKIGVVARVRGRITS 122

Query: 319 YRGKLQLTVSNVFIERDPNAETLHWLQCIRLARKCYDIVPAP 194
           YRG +Q+T S+V IERDPNAE  HWLQC++LAR CY +  +P
Sbjct: 123 YRGTVQITASDVVIERDPNAEIFHWLQCVKLARSCYHVNASP 164


>ref|XP_003612019.1| CST complex subunit STN1 [Medicago truncatula]
           gi|355513354|gb|AES94977.1| CST complex subunit STN1
           [Medicago truncatula]
          Length = 185

 Score =  174 bits (440), Expect = 2e-41
 Identities = 82/156 (52%), Positives = 115/156 (73%), Gaps = 1/156 (0%)
 Frame = -3

Query: 667 ALRDTHVKLLAFDXXXXXXXXXXXNAVCRKGTLLISRAETLGVVTSREHKPDRFLRFTID 488
           +L +THVKLLAFD           ++  R  ++ I+RAET+G +T R+HKP +FLRF ID
Sbjct: 11  SLHNTHVKLLAFDLLTLTPPISPNHSFTRN-SIPITRAETVGTITLRDHKPFKFLRFAID 69

Query: 487 DGTGCIPCVLWLNQLTSPYFSRR-SPPDVRFIAEAARNFASLIQIGVSARVRGKVTVYRG 311
           DGTGCIPC+LWLN +TSP+ +RR SP D+  +A+AA   A ++++G  ARVRG+VT Y+G
Sbjct: 70  DGTGCIPCILWLNHMTSPHLARRRSPQDLCLLADAAARSAEVVKVGNVARVRGRVTEYKG 129

Query: 310 KLQLTVSNVFIERDPNAETLHWLQCIRLARKCYDIV 203
            +Q+TV++V  ERDPN E LHW++C+ LAR CY++V
Sbjct: 130 GVQITVTDVISERDPNVEVLHWVECVNLARNCYNLV 165


>gb|AFK40847.1| unknown [Medicago truncatula]
          Length = 179

 Score =  171 bits (433), Expect = 1e-40
 Identities = 82/156 (52%), Positives = 113/156 (72%), Gaps = 1/156 (0%)
 Frame = -3

Query: 667 ALRDTHVKLLAFDXXXXXXXXXXXNAVCRKGTLLISRAETLGVVTSREHKPDRFLRFTID 488
           +L +THVKLLAFD           ++  R  ++ I+RAET+G +T R+HKP +FLRF ID
Sbjct: 11  SLHNTHVKLLAFDLLTLTPPISPNHSFTRN-SISITRAETVGTITLRDHKPFKFLRFAID 69

Query: 487 DGTGCIPCVLWLNQLTSPYFSRR-SPPDVRFIAEAARNFASLIQIGVSARVRGKVTVYRG 311
           DGTGCIPC+LWLN +TSP+ +RR SP D+  +A+AA   A + + G  ARVRG+VT Y+G
Sbjct: 70  DGTGCIPCILWLNHMTSPHLARRRSPQDLCLLADAAARSAEVAKFGNVARVRGRVTEYKG 129

Query: 310 KLQLTVSNVFIERDPNAETLHWLQCIRLARKCYDIV 203
            +Q+TV++V  ERDPN E LHW++C+ LAR CY++V
Sbjct: 130 GVQITVTDVVSERDPNVEVLHWVECVNLARNCYNLV 165


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