BLASTX nr result

ID: Atractylodes21_contig00024511 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024511
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    82   6e-14
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    78   6e-13
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]    60   1e-07
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    60   2e-07
emb|CAN62821.1| hypothetical protein VITISV_013041 [Vitis vinifera]    60   2e-07

>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 51/135 (37%), Positives = 75/135 (55%), Gaps = 13/135 (9%)
 Frame = +3

Query: 75  KPTLGSTGNTQKTPTP-----------STTLSSVNKAITAGPLNVAKTSISNTRKLTEEE 221
           KPT      TQ   TP           ST+++S NK  T  P  +AK      R+L+E+E
Sbjct: 285 KPTYSFNYPTQTHNTPYNQFPAPSHHSSTSINSPNKPKTTLP--IAKP-FGEIRRLSEKE 341

Query: 222 LRDKRARGLCFCCDKKYRVGHKCKKKELTVML--LQDXXXXXXXXXXXXXXXXNDPDLQV 395
           L+ KR  GLCF CD+K+ +GH+CKKKEL+++L   ++                +D  L++
Sbjct: 342 LQYKREHGLCFRCDEKWAIGHRCKKKELSILLGHEEEEEEYGSLMENIQPAHPDDSQLEI 401

Query: 396 HAAELSLNSVVGLSS 440
           H+ E+SLNSV+G+SS
Sbjct: 402 HSPEISLNSVMGISS 416


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 55/162 (33%), Positives = 84/162 (51%), Gaps = 16/162 (9%)
 Frame = +3

Query: 3   EMA*LVEDRN-------TQLREG-YKYINGG--YKPTLGSTGNTQKTPTPSTTLSSVNKA 152
           E+A  +E+RN       T  R G +   N G    P+L S   +Q     ST   ++N  
Sbjct: 319 ELALKLEERNRVNGARRTGPRSGSFSIYNRGPNSNPSLPSVYGSQGGSNASTKSWAINSN 378

Query: 153 ITAGPLNVAKT------SISNTRKLTEEELRDKRARGLCFCCDKKYRVGHKCKKKELTVM 314
            +   +N AK            R+LTE+EL++KRA+GLCF CD+K+ VGH+C++KEL+V+
Sbjct: 379 ASQTSVNNAKPPPLSSRGFGEMRRLTEKELQEKRAKGLCFKCDEKWGVGHQCRRKELSVL 438

Query: 315 LLQDXXXXXXXXXXXXXXXXNDPDLQVHAAELSLNSVVGLSS 440
            ++D                  P  ++   E+SLNSV+GLS+
Sbjct: 439 FMEDNEEDELEGALSGSEAPPSPTEEI-PPEVSLNSVIGLSN 479


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 47/146 (32%), Positives = 71/146 (48%)
 Frame = +3

Query: 3    EMA*LVEDRNTQLREGYKYINGGYKPTLGSTGNTQKTPTPSTTLSSVNKAITAGPLNVAK 182
            EMA  VEDRN  +R   +  NG     + ST N  +        +   +A+  G   +++
Sbjct: 915  EMAQRVEDRNLAMRAA-REPNGPKSTKMLSTANRGEWKIGENFQT---RAVAVGEKTMSQ 970

Query: 183  TSISNTRKLTEEELRDKRARGLCFCCDKKYRVGHKCKKKELTVMLLQDXXXXXXXXXXXX 362
                  ++LTE EL+ +R +GL F C++K+  GH+C KKEL V+L+ +            
Sbjct: 971  RREIPIKRLTESELQARREKGLWFKCEEKFSPGHRC-KKELRVLLVHEDEEEDDNQFDDR 1029

Query: 363  XXXXNDPDLQVHAAELSLNSVVGLSS 440
                        A ELSLNSVVGL++
Sbjct: 1030 ATEEPALIELKDAVELSLNSVVGLTT 1055


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 46/147 (31%), Positives = 69/147 (46%), Gaps = 21/147 (14%)
 Frame = +3

Query: 63  NGGYKPTLGSTGNTQKT-------------PTPSTTLSS----VNKAITAGPLNVAKTSI 191
           +  Y P   +T N+ +T             P P  ++ S    V+ A T   + +A+   
Sbjct: 230 SNNYSPNTHTTPNSSQTFRTQTQTYLPPKHPAPPQSVFSSPSIVSPAKTKTHIPIARP-Y 288

Query: 192 SNTRKLTEEELRDKRARGLCFCCDKKYRVGHKCKKKELTVMLLQDXXXXXXXXXXXXXXX 371
              R+L+E+EL+ KR RGLCF CD K+ VGH+C KKEL+V+L                  
Sbjct: 289 GEIRRLSEKELQHKRERGLCFRCDDKWSVGHRC-KKELSVLLSCKEDEEIEYGELENAPQ 347

Query: 372 XNDPDLQVHAA----ELSLNSVVGLSS 440
              P+  +       E+SLNSV+G S+
Sbjct: 348 PEIPNTHIAETFVNPEISLNSVMGFSN 374


>emb|CAN62821.1| hypothetical protein VITISV_013041 [Vitis vinifera]
          Length = 1357

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
 Frame = +3

Query: 81  TLGSTGNTQKTPTP-STTLSSVNKAITAGPLNVAKTSISNTRKLTEEELRDKRARGLCFC 257
           T   T N    P P ST +   N  IT            N R  +  +L ++RA+GLCF 
Sbjct: 234 TFPKTTNAGLLPLPPSTNIPKTNPGITT----------RNHRNFSNRDLDERRAKGLCFW 283

Query: 258 CDKKYRVGHKCKKKELTVMLLQDXXXXXXXXXXXXXXXXNDPDLQVHAAELSLNSVV 428
           CD+K+  GHKCK+K+L VM +Q                  + D Q+   +LSLN+++
Sbjct: 284 CDEKFTPGHKCKRKQLYVMQIQVETDGEGPEGNLQMEGLGEEDEQI---QLSLNALM 337


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