BLASTX nr result

ID: Atractylodes21_contig00024489 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024489
         (1792 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   242   e-105
emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera]   242   e-101
ref|XP_002283100.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   221   1e-93
ref|XP_003537459.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   231   1e-92
emb|CBI16098.3| unnamed protein product [Vitis vinifera]              198   1e-90

>ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 388

 Score =  242 bits (618), Expect(2) = e-105
 Identities = 134/226 (59%), Positives = 150/226 (66%), Gaps = 12/226 (5%)
 Frame = +2

Query: 116 MSRTASYWCYRCTRIVRVIPQDAVVCPYCQGEFIEAVDSHAPSTPESRLPFPAAAAMYML 295
           M+ T SYWC+RCTR VRV  QD++VCPYC+  F+E +++  P +      FPA A MYML
Sbjct: 3   MASTTSYWCHRCTRFVRVWAQDSIVCPYCESGFLEEIEA-TPRSENHHRRFPATA-MYML 60

Query: 296 GTNESSD-------LRFRRRNTGDRSPFNPVIVLRG-ADEHSGDGD----RGFELYYDDG 439
           G N           LR  RRN GDRSPFNPVIVLRG AD   G+G       FELYYDDG
Sbjct: 61  GNNRPDSEQSANLGLRRSRRNAGDRSPFNPVIVLRGPADGGGGEGGVVERSSFELYYDDG 120

Query: 440 AGSGLQPLPPTMSEXXXXXXXXXXXXXXXXXXMSEFLMGSGFDRLLDQLSQIEINGLGRA 619
           AGSGL+PLP TMSE                     FLMGSGFDRLL+QLSQIEING GR 
Sbjct: 121 AGSGLRPLPATMSE---------------------FLMGSGFDRLLEQLSQIEINGFGRG 159

Query: 620 EHPPASKAAVESMPAIEISDVQVSSELHCAVCKEAFLLGAEAREMP 757
           EHPPASKAAVESMP IEI    + +ELHCAVCKEAF LG+EAREMP
Sbjct: 160 EHPPASKAAVESMPTIEIVSSHIVTELHCAVCKEAFQLGSEAREMP 205



 Score =  167 bits (422), Expect(2) = e-105
 Identities = 98/193 (50%), Positives = 112/193 (58%), Gaps = 16/193 (8%)
 Frame = +1

Query: 811  EAREMPCKHIYHPNCILPWLTLRNSCPVCRHQLPTDLTNSNNLGLS-------EQNEEES 969
            EAREMPCKHIYH +CILPWL+LRNSCPVCRH+LPTD+  + N  +S         NEEE+
Sbjct: 200  EAREMPCKHIYHSDCILPWLSLRNSCPVCRHELPTDVPGTRNSPVSGNEALSPAPNEEET 259

Query: 970  AIVGLTIWRLPXXXXXXXXXXXXXXXXXXXXXLPVVYTETDGGFSDNSGTPRRIMWESRR 1149
              VGLTIWRLP                     LPVVYTE DGGF +NSG PRRI W SRR
Sbjct: 260  --VGLTIWRLP--GGGFAVGRFSGGRRAGERELPVVYTEMDGGF-NNSGAPRRISWASRR 314

Query: 1150 YRARGEGG-IGRVFRNMLSFFGRLRPSSNGA--------XXXXXXXXXXXXXXXMTRGRS 1302
             R+R  GG +GR FRN+ SF GR R SS+ +                         R RS
Sbjct: 315  SRSRESGGSLGRAFRNIFSFLGRFRSSSSSSSRSTSEPGSITRSHSHSSSVFSRYVRRRS 374

Query: 1303 RTWVLEEQSGISR 1341
            R WVLE+QSG SR
Sbjct: 375  RAWVLEDQSGNSR 387


>emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera]
          Length = 1218

 Score =  242 bits (618), Expect(2) = e-101
 Identities = 134/226 (59%), Positives = 150/226 (66%), Gaps = 12/226 (5%)
 Frame = +2

Query: 116 MSRTASYWCYRCTRIVRVIPQDAVVCPYCQGEFIEAVDSHAPSTPESRLPFPAAAAMYML 295
           M+ T SYWC+RCTR VRV  QD++VCPYC+  F+E +++  P +      FPA A MYML
Sbjct: 113 MASTTSYWCHRCTRFVRVWAQDSIVCPYCESGFLEEIEA-TPRSENHHRRFPATA-MYML 170

Query: 296 GTNESSD-------LRFRRRNTGDRSPFNPVIVLRG-ADEHSGDGD----RGFELYYDDG 439
           G N           LR  RRN GDRSPFNPVIVLRG AD   G+G       FELYYDDG
Sbjct: 171 GNNRPDSEQSANLGLRRSRRNAGDRSPFNPVIVLRGPADGGGGEGGVVERSSFELYYDDG 230

Query: 440 AGSGLQPLPPTMSEXXXXXXXXXXXXXXXXXXMSEFLMGSGFDRLLDQLSQIEINGLGRA 619
           AGSGL+PLP TMSE                     FLMGSGFDRLL+QLSQIEING GR 
Sbjct: 231 AGSGLRPLPATMSE---------------------FLMGSGFDRLLEQLSQIEINGFGRG 269

Query: 620 EHPPASKAAVESMPAIEISDVQVSSELHCAVCKEAFLLGAEAREMP 757
           EHPPASKAAVESMP IEI    + +ELHCAVCKEAF LG+EAREMP
Sbjct: 270 EHPPASKAAVESMPTIEIVSSHIVTELHCAVCKEAFQLGSEAREMP 315



 Score =  155 bits (393), Expect(2) = e-101
 Identities = 85/151 (56%), Positives = 98/151 (64%), Gaps = 8/151 (5%)
 Frame = +1

Query: 811  EAREMPCKHIYHPNCILPWLTLRNSCPVCRHQLPTDLTNSNNLGLS-------EQNEEES 969
            EAREMPCKHIYH +CILPWL+LRNSCPVCRH+LPTD+  + N  +S         NEEE+
Sbjct: 310  EAREMPCKHIYHSDCILPWLSLRNSCPVCRHELPTDVPGTRNSPVSGTEALSPAPNEEET 369

Query: 970  AIVGLTIWRLPXXXXXXXXXXXXXXXXXXXXXLPVVYTETDGGFSDNSGTPRRIMWESRR 1149
              VGLTIWRLP                     LPVVYTE DGGF +NSG PRRI W SRR
Sbjct: 370  --VGLTIWRLP--GGGFAVGRFSGGRRAGERELPVVYTEMDGGF-NNSGAPRRISWASRR 424

Query: 1150 YRARGEGG-IGRVFRNMLSFFGRLRPSSNGA 1239
             R+R  GG +GR FRN+ SF GR R SS+ +
Sbjct: 425  SRSRESGGSLGRAFRNIFSFLGRFRSSSSSS 455


>ref|XP_002283100.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 361

 Score =  221 bits (562), Expect(2) = 1e-93
 Identities = 125/218 (57%), Positives = 146/218 (66%), Gaps = 9/218 (4%)
 Frame = +2

Query: 131 SYWCYRCTRIVRVIPQDAVVCPYCQGEFIEAVDSHAPSTPESRLPFPAAAAMYML----- 295
           SYWCY C R VRV   DA+VCP C G F+E ++   P  P     FPAAA MYM+     
Sbjct: 2   SYWCYSCNRFVRVWSHDAIVCPDCDGGFLEEIEEQ-PRRPHR---FPAAA-MYMIENRPN 56

Query: 296 -GTNESSDLRFRRRNTGDRSPFNPVIVLRG-ADEHSGDG-DRG-FELYYDDGAGSGLQPL 463
              N  S +R  RR  GDRSPFNPVIV+RG ADE  G+G DRG F+LYYDDG GSGL+PL
Sbjct: 57  SAQNSHSAVRRIRRGRGDRSPFNPVIVMRGTADEGGGEGGDRGAFDLYYDDGGGSGLRPL 116

Query: 464 PPTMSEXXXXXXXXXXXXXXXXXXMSEFLMGSGFDRLLDQLSQIEINGLGRAEHPPASKA 643
           P ++SE                     FL+GSGFDRLL+QLSQ+EING+GR E PPASKA
Sbjct: 117 PASVSE---------------------FLLGSGFDRLLEQLSQMEINGIGRYEQPPASKA 155

Query: 644 AVESMPAIEISDVQVSSELHCAVCKEAFLLGAEAREMP 757
           A+E+MP IEI+D  V++E HCAVCKE F LGAEAREMP
Sbjct: 156 AIEAMPTIEIADAHVNTEHHCAVCKEPFELGAEAREMP 193



 Score =  151 bits (381), Expect(2) = 1e-93
 Identities = 89/181 (49%), Positives = 105/181 (58%), Gaps = 4/181 (2%)
 Frame = +1

Query: 811  EAREMPCKHIYHPNCILPWLTLRNSCPVCRHQLPTDLTNSNNLGLSEQNEEESAIVGLTI 990
            EAREMPCKHIYH +CILPWL+LRNSCPVCRH+LP++  NS     +EQ  EE+  VGLTI
Sbjct: 188  EAREMPCKHIYHSDCILPWLSLRNSCPVCRHELPSEERNSPE--SNEQTPEET--VGLTI 243

Query: 991  WRLPXXXXXXXXXXXXXXXXXXXXXLPVVYTETDGGFSDNSGTPRRIMWESRRYRARGEG 1170
            WRLP                     LPVVYTE DGGF +N G PRRI W SR  R +  G
Sbjct: 244  WRLP--GGGFAVGRFSGGRRGGERELPVVYTEMDGGF-NNGGAPRRISWTSRTNRNQERG 300

Query: 1171 GIGRVFRNMLSFFGRLRPSSNGAXXXXXXXXXXXXXXXMTRGRS----RTWVLEEQSGIS 1338
            G+GR+FRN+L+ FG    SS+ +               +T G S    R W LE  SGI 
Sbjct: 301  GLGRMFRNLLACFGG-HGSSSSSSSSESGSRRRSSSSLLTLGSSSRNRRAWALEVNSGIR 359

Query: 1339 R 1341
            R
Sbjct: 360  R 360


>ref|XP_003537459.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
          Length = 393

 Score =  231 bits (589), Expect(2) = 1e-92
 Identities = 129/224 (57%), Positives = 146/224 (65%), Gaps = 11/224 (4%)
 Frame = +2

Query: 119 SRTASYWCYRCTRIVRVIPQDAVVCPYCQGEFIEAVDSHAPSTPE-----SRLPFPAAAA 283
           S T+SYWCYRC+R VRV P   VVCP C G FIE ++ H P +        R  FPAAA 
Sbjct: 5   SGTSSYWCYRCSRFVRVWPHHTVVCPDCDGGFIEEIE-HPPRSVHLDPRRHRHRFPAAA- 62

Query: 284 MYMLGTNESSD------LRFRRRNTGDRSPFNPVIVLRGADEHSGDGDRGFELYYDDGAG 445
           MYM+G   SSD      LR  RRN GDRSPFNPVIVLRG  E   D  RGFEL+YDDG G
Sbjct: 63  MYMIGQRPSSDPRPASSLRRTRRNGGDRSPFNPVIVLRGGAE---DESRGFELFYDDGTG 119

Query: 446 SGLQPLPPTMSEXXXXXXXXXXXXXXXXXXMSEFLMGSGFDRLLDQLSQIEINGLGRAEH 625
           SGL+PLPP+MSE                     FL+GSGFDRLL+QLSQIEING+GR EH
Sbjct: 120 SGLRPLPPSMSE---------------------FLLGSGFDRLLEQLSQIEINGIGRYEH 158

Query: 626 PPASKAAVESMPAIEISDVQVSSELHCAVCKEAFLLGAEAREMP 757
           PPASKAA++S+P IEI D  ++ E HCAVCKEAF      REMP
Sbjct: 159 PPASKAAIDSLPTIEIDDTHLAMESHCAVCKEAFETSTAVREMP 202



 Score =  137 bits (344), Expect(2) = 1e-92
 Identities = 86/200 (43%), Positives = 98/200 (49%), Gaps = 27/200 (13%)
 Frame = +1

Query: 817  REMPCKHIYHPNCILPWLTLRNSCPVCRHQLPTDLTNSN---------------NLGLSE 951
            REMPCKHIYHP CILPWL L NSCPVCRH+LP D  N N               N+GL  
Sbjct: 199  REMPCKHIYHPECILPWLALHNSCPVCRHELPADTPNPNPNPNSNSNSNQNPSQNVGL-- 256

Query: 952  QNEEESAIVGLTIWRLPXXXXXXXXXXXXXXXXXXXXXLPVVYTETDGGFSDNSGTPRRI 1131
             NEEE+  VGLTIWRLP                     LPVVYTE DGGF++  G PRRI
Sbjct: 257  -NEEEN--VGLTIWRLP--GGGFAVGRFSGGRRGADRELPVVYTEMDGGFNNGGGEPRRI 311

Query: 1132 MWESRRYRARGEGGIGRVFRNMLSFF--GRLRPSSNGAXXXXXXXXXXXXXXXMTRGRS- 1302
             W SR  R R  GG+ R FRN+   F  G    SS+G                 +  RS 
Sbjct: 312  SW-SRGNRGRESGGLNRFFRNLFGCFRGGSSNTSSSGGASATQRSASSRESMRASSSRSS 370

Query: 1303 ---------RTWVLEEQSGI 1335
                     RTW ++  SG+
Sbjct: 371  TMDLSPRSRRTWSMDVNSGM 390


>emb|CBI16098.3| unnamed protein product [Vitis vinifera]
          Length = 538

 Score =  198 bits (503), Expect(2) = 1e-90
 Identities = 111/214 (51%), Positives = 126/214 (58%)
 Frame = +2

Query: 116 MSRTASYWCYRCTRIVRVIPQDAVVCPYCQGEFIEAVDSHAPSTPESRLPFPAAAAMYML 295
           M+ T SYWC+RCTR VRV  QD++VCPYC+  F+E +++    TP S             
Sbjct: 171 MASTTSYWCHRCTRFVRVWAQDSIVCPYCESGFLEEIEA----TPRSE------------ 214

Query: 296 GTNESSDLRFRRRNTGDRSPFNPVIVLRGADEHSGDGDRGFELYYDDGAGSGLQPLPPTM 475
                      RRN GDRSP +                  FELYYDDGAGSGL+PLP TM
Sbjct: 215 --------NHHRRNAGDRSPSS------------------FELYYDDGAGSGLRPLPATM 248

Query: 476 SEXXXXXXXXXXXXXXXXXXMSEFLMGSGFDRLLDQLSQIEINGLGRAEHPPASKAAVES 655
           SE                     FLMGSGFDRLL+QLSQIEING GR EHPPASKAAVES
Sbjct: 249 SE---------------------FLMGSGFDRLLEQLSQIEINGFGRGEHPPASKAAVES 287

Query: 656 MPAIEISDVQVSSELHCAVCKEAFLLGAEAREMP 757
           MP IEI    + +ELHCAVCKEAF LG+EAREMP
Sbjct: 288 MPTIEIVSSHIVTELHCAVCKEAFQLGSEAREMP 321



 Score =  163 bits (413), Expect(2) = 1e-90
 Identities = 94/186 (50%), Positives = 106/186 (56%), Gaps = 9/186 (4%)
 Frame = +1

Query: 811  EAREMPCKHIYHPNCILPWLTLRNSCPVCRHQLPTDLTNSNNLGLSEQNEEESAIVGLTI 990
            EAREMPCKHIYH +CILPWL+LRNSCPVCRH+LPTD+  + N          S  VGLTI
Sbjct: 316  EAREMPCKHIYHSDCILPWLSLRNSCPVCRHELPTDVPGTRN----------SPTVGLTI 365

Query: 991  WRLPXXXXXXXXXXXXXXXXXXXXXLPVVYTETDGGFSDNSGTPRRIMWESRRYRARGEG 1170
            WRLP                     LPVVYTE DGGF +NSG PRRI W SRR R+R  G
Sbjct: 366  WRLP--GGGFAVGRFSGGRRAGERELPVVYTEMDGGF-NNSGAPRRISWASRRSRSRESG 422

Query: 1171 G-IGRVFRNMLSFFGRLRPSSNGA--------XXXXXXXXXXXXXXXMTRGRSRTWVLEE 1323
            G +GR FRN+ SF GR R SS+ +                         R RSR WVLE+
Sbjct: 423  GSLGRAFRNIFSFLGRFRSSSSSSSRSTSEPGSITRSHSHSSSVFSRYVRRRSRAWVLED 482

Query: 1324 QSGISR 1341
            QSG SR
Sbjct: 483  QSGNSR 488


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