BLASTX nr result

ID: Atractylodes21_contig00024480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024480
         (202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519893.1| arginine/serine-rich splicing factor, putati...   140   1e-31
ref|XP_003634148.1| PREDICTED: pre-mRNA-splicing factor SF2-like...   136   2e-30
emb|CAN71592.1| hypothetical protein VITISV_015931 [Vitis vinifera]   136   2e-30
gb|ABA46766.1| pre-mRNA splicing factor-like protein [Solanum tu...   136   2e-30
ref|XP_002321360.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30

>ref|XP_002519893.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
           gi|223540939|gb|EEF42497.1| arginine/serine-rich
           splicing factor, putative [Ricinus communis]
          Length = 264

 Score =  140 bits (353), Expect = 1e-31
 Identities = 63/66 (95%), Positives = 64/66 (96%)
 Frame = +3

Query: 3   VGNLPLDIREWEVEDLFYKYGRILDIELKIPPRPPCYCFVEFESARDAEDAIRGRDGYNF 182
           VGNLP DIREWEVEDLFYKYGRILDIELKIPPRPPCYCFVEFE+ RDAEDAIRGRDGYNF
Sbjct: 11  VGNLPSDIREWEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENTRDAEDAIRGRDGYNF 70

Query: 183 DGCRLR 200
           DGCRLR
Sbjct: 71  DGCRLR 76


>ref|XP_003634148.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Vitis
           vinifera] gi|359490739|ref|XP_003634149.1| PREDICTED:
           pre-mRNA-splicing factor SF2-like isoform 2 [Vitis
           vinifera] gi|302143975|emb|CBI23080.3| unnamed protein
           product [Vitis vinifera]
          Length = 250

 Score =  136 bits (343), Expect = 2e-30
 Identities = 60/66 (90%), Positives = 65/66 (98%)
 Frame = +3

Query: 3   VGNLPLDIREWEVEDLFYKYGRILDIELKIPPRPPCYCFVEFESARDAEDAIRGRDGYNF 182
           VGNLP DIRE+E+EDLFYKYGRILD+ELKIPPRPPCYCFVEFE++RDAEDAIRGRDGYNF
Sbjct: 11  VGNLPSDIREYEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENSRDAEDAIRGRDGYNF 70

Query: 183 DGCRLR 200
           DGCRLR
Sbjct: 71  DGCRLR 76


>emb|CAN71592.1| hypothetical protein VITISV_015931 [Vitis vinifera]
          Length = 267

 Score =  136 bits (343), Expect = 2e-30
 Identities = 60/66 (90%), Positives = 65/66 (98%)
 Frame = +3

Query: 3   VGNLPLDIREWEVEDLFYKYGRILDIELKIPPRPPCYCFVEFESARDAEDAIRGRDGYNF 182
           VGNLP DIRE+E+EDLFYKYGRILD+ELKIPPRPPCYCFVEFE++RDAEDAIRGRDGYNF
Sbjct: 11  VGNLPSDIREYEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENSRDAEDAIRGRDGYNF 70

Query: 183 DGCRLR 200
           DGCRLR
Sbjct: 71  DGCRLR 76


>gb|ABA46766.1| pre-mRNA splicing factor-like protein [Solanum tuberosum]
          Length = 269

 Score =  136 bits (342), Expect = 2e-30
 Identities = 62/66 (93%), Positives = 64/66 (96%)
 Frame = +3

Query: 3   VGNLPLDIREWEVEDLFYKYGRILDIELKIPPRPPCYCFVEFESARDAEDAIRGRDGYNF 182
           VGNLP DI+E EVEDLFYKYGRILDIELKIPPRPPCYCFVEFES+RDAEDAIRGRDGYNF
Sbjct: 11  VGNLPADIKELEVEDLFYKYGRILDIELKIPPRPPCYCFVEFESSRDAEDAIRGRDGYNF 70

Query: 183 DGCRLR 200
           DGCRLR
Sbjct: 71  DGCRLR 76


>ref|XP_002321360.1| predicted protein [Populus trichocarpa] gi|222868356|gb|EEF05487.1|
           predicted protein [Populus trichocarpa]
          Length = 240

 Score =  136 bits (342), Expect = 2e-30
 Identities = 61/66 (92%), Positives = 64/66 (96%)
 Frame = +3

Query: 3   VGNLPLDIREWEVEDLFYKYGRILDIELKIPPRPPCYCFVEFESARDAEDAIRGRDGYNF 182
           VGNLP DIRE E+EDLFYKYGRILD+ELKIPPRPPCYCFVEFE+ARDAEDAIRGRDGYNF
Sbjct: 11  VGNLPADIRESEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNF 70

Query: 183 DGCRLR 200
           DGCRLR
Sbjct: 71  DGCRLR 76


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