BLASTX nr result

ID: Atractylodes21_contig00024464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024464
         (1112 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279824.1| PREDICTED: pentatricopeptide repeat-containi...   313   4e-83
emb|CAN64107.1| hypothetical protein VITISV_013147 [Vitis vinifera]   313   5e-83
ref|XP_002285135.1| PREDICTED: pentatricopeptide repeat-containi...   286   8e-75
emb|CAN70199.1| hypothetical protein VITISV_021220 [Vitis vinifera]   284   2e-74
ref|XP_002514151.1| pentatricopeptide repeat-containing protein,...   283   5e-74

>ref|XP_002279824.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15690-like
            [Vitis vinifera]
          Length = 476

 Score =  313 bits (803), Expect = 4e-83
 Identities = 172/355 (48%), Positives = 228/355 (64%), Gaps = 18/355 (5%)
 Frame = -2

Query: 1012 MPRQPEPKSPFYLPNPTSKFLCTAS--------------RNDSTTRTTHRHLNPSPNRST 875
            +P +P   SP     P  K LCT +              R  ++T    +H   +   + 
Sbjct: 30   LPLKPISSSP---QKPPLKLLCTYALPNHQPTNKPRVFRRQTNSTHPPKQHNGQNLTGTQ 86

Query: 874  LRKENNLKQKPTSQSPPGADLMSLCKDGLIKETIALMSEGVPAEYDVFEVVLDSCD---D 704
            L   N  + +  +    G DLM LC++G I+E +  M +GV AEY VF  +L SC     
Sbjct: 87   LNNANYPQTENFTVVHSGVDLMGLCEEGKIREAVEYMGQGVCAEYGVFCAMLSSCGKTKS 146

Query: 703  LELGKKVQQLLIRSPYYGDVTLNSKLVGLYVKCNSMRNARRVFDRMRERQDLKLWHLLIN 524
            LE+G++V  LL RS + GDV LN+KL+ +Y +C SMR+ARRVFDRMRER ++  WHL+IN
Sbjct: 147  LEVGRRVHDLLARSKFGGDVELNNKLIEMYGRCGSMRDARRVFDRMRER-NMSSWHLMIN 205

Query: 523  GYVDNGEADAGLLLYEQMRELGLTPNGETFRLVLLACAGVDAVQECLIHFGSMRDKYNIV 344
            GY  NG+   GLLL+E+MR++GL P GETF  VL AC    +V+E L++F  M+ +  I+
Sbjct: 206  GYAANGQGRDGLLLFERMRKVGLRPVGETFVAVLSACG---SVEEGLMYFELMKKECGII 262

Query: 343  PRIEHYLGVIDVLGNAGHLTEAVEFIENIPFEPTVEIWESLMNIARVHGDIEMEDRAEAL 164
            P IEHYLGVIDVLG  GH+ EA EF++ +P EPT E+WE+L N AR+HG IE+EDRAE +
Sbjct: 263  PGIEHYLGVIDVLGKFGHINEAEEFVDKMPIEPTAEVWEALRNFARIHGAIELEDRAEEM 322

Query: 163  LASLRPSMVLPDKLPL-PAGKQSANNMLEGKNKVHEYKSADQYKEDAYEKLKGLN 2
            LA+L PS  + DK+P  P  KQ A NMLEGKN+V EY+S + YK DAYEKLKGLN
Sbjct: 323  LAALDPSKAITDKIPTPPQKKQLAVNMLEGKNRVSEYRSTNPYKGDAYEKLKGLN 377


>emb|CAN64107.1| hypothetical protein VITISV_013147 [Vitis vinifera]
          Length = 497

 Score =  313 bits (802), Expect = 5e-83
 Identities = 175/357 (49%), Positives = 230/357 (64%), Gaps = 20/357 (5%)
 Frame = -2

Query: 1012 MPRQPEPKSPFYLPNPTSKFLCTAS--------------RNDSTTRTTHRHLNPSPNRST 875
            +P +P   SP    NP  K LCT +              R  ++T    +H   +   + 
Sbjct: 30   LPLKPISSSP---QNPPLKLLCTYALPNHQPTNKPRVFRRQTNSTHPPKQHNGQNLTGTQ 86

Query: 874  LRKEN-NLKQKPT-SQSPPGADLMSLCKDGLIKETIALMSEGVPAEYDVFEVVLDSCD-- 707
            L  +N N  Q    +    G DLM LC++G I+E +  M +GV AEY VF  +L SC   
Sbjct: 87   LNTQNANYPQTENFTVVHSGVDLMGLCEEGKIREAVEYMGQGVCAEYGVFCAMLSSCGKT 146

Query: 706  -DLELGKKVQQLLIRSPYYGDVTLNSKLVGLYVKCNSMRNARRVFDRMRERQDLKLWHLL 530
              LE+G++V  LL RS + GDV LN+KL+ +Y +C SMR+ARRVFDRMRER ++  WHL+
Sbjct: 147  KSLEVGRRVHDLLARSKFGGDVELNNKLIEMYGRCGSMRDARRVFDRMRER-NMSSWHLM 205

Query: 529  INGYVDNGEADAGLLLYEQMRELGLTPNGETFRLVLLACAGVDAVQECLIHFGSMRDKYN 350
            INGY  NG+   GLLL+E+MR++GL P GETF  VL AC    +V+E L++F  M+ +  
Sbjct: 206  INGYAANGQGRDGLLLFERMRKVGLRPVGETFVAVLSACG---SVEEGLMYFELMKKECG 262

Query: 349  IVPRIEHYLGVIDVLGNAGHLTEAVEFIENIPFEPTVEIWESLMNIARVHGDIEMEDRAE 170
            I+P IEHYLGVIDVLG  GH+ EA EF++ +P EPT E+WE+L N AR+HG IE+EDRAE
Sbjct: 263  IIPGIEHYLGVIDVLGKFGHINEAEEFVDKMPIEPTAEVWEALRNFARIHGAIELEDRAE 322

Query: 169  ALLASLRPSMVLPDKLPL-PAGKQSANNMLEGKNKVHEYKSADQYKEDAYEKLKGLN 2
             +LA+L PS  + DK+P  P  KQ A NMLEGKN+V EY+S + YK DAYEKLKGLN
Sbjct: 323  EMLAALDPSKAITDKIPTPPQKKQLAVNMLEGKNRVSEYRSTNPYKGDAYEKLKGLN 379


>ref|XP_002285135.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15690
            [Vitis vinifera]
          Length = 593

 Score =  286 bits (731), Expect = 8e-75
 Identities = 153/347 (44%), Positives = 218/347 (62%), Gaps = 9/347 (2%)
 Frame = -2

Query: 1015 RMPRQ--PEPKSPFYLPNPTSKFLCTASRNDSTTRTTHRHLNPSPNRSTLRKENNLK--Q 848
            R P Q  P+ ++P +L N    +    SRN  + +        SP++   +  N  +  +
Sbjct: 152  RSPNQWNPQHQNPSHLNNQNQNYPQPGSRNLPSNQNQSYPHQGSPSQWNNQNPNQAQIVE 211

Query: 847  KPTSQSPPG-ADLMSLCKDGLIKETIALMSEGVPAEYDVFEVVLDSCDD---LELGKKVQ 680
               S +PP  ADLM+LC++G +KE + LM +GV A+   F  + +SC     LE  KKV 
Sbjct: 212  NQVSHAPPSVADLMNLCQEGKVKEAVELMEKGVRADAQCFYALFNSCGSPKLLEEAKKVH 271

Query: 679  QLLIRSPYYGDVTLNSKLVGLYVKCNSMRNARRVFDRMRERQDLKLWHLLINGYVDNGEA 500
               ++S +  D+ LN+K++ +Y  C SM +ARRVFD M  R D+  WHL+INGY +N   
Sbjct: 272  DFFLQSTFRSDLQLNNKVLEMYGNCGSMTDARRVFDHMANR-DMDSWHLMINGYANNAMG 330

Query: 499  DAGLLLYEQMRELGLTPNGETFRLVLLACAGVDAVQECLIHFGSMRDKYNIVPRIEHYLG 320
            D GL LYEQMR+LGL PN +TF  VL  CA  +AV+E  IHF SM+ +Y I P  EHY+G
Sbjct: 331  DDGLQLYEQMRKLGLEPNEQTFLAVLSTCASAEAVEEGFIHFESMKTEYGITPTFEHYVG 390

Query: 319  VIDVLGNAGHLTEAVEFIENIPFEPTVEIWESLMNIARVHGDIEMEDRAEALLASLRPSM 140
            +IDVLG +GH+ EA EFIE +P EP+  +WE+LMN A++HGDI++ED AE L+ +L P  
Sbjct: 391  IIDVLGKSGHVIEAKEFIEQMPVEPSAVVWEALMNYAKIHGDIDLEDHAEELMVALDPLK 450

Query: 139  VLPDKLPL-PAGKQSANNMLEGKNKVHEYKSADQYKEDAYEKLKGLN 2
             + +K P  P  K++A NML+GKN++ E+++   YK+D  EKLK LN
Sbjct: 451  AVANKTPTPPPKKRTAINMLDGKNRLSEFRNPTLYKDD--EKLKSLN 495


>emb|CAN70199.1| hypothetical protein VITISV_021220 [Vitis vinifera]
          Length = 627

 Score =  284 bits (727), Expect = 2e-74
 Identities = 154/347 (44%), Positives = 218/347 (62%), Gaps = 9/347 (2%)
 Frame = -2

Query: 1015 RMPRQ--PEPKSPFYLPNPTSKFLCTASRN-DSTTRTTHRHL-NPSPNRSTLRKENNLKQ 848
            R P Q  P+ ++P  L N    +    SRN  S    ++ H  +PS   +    +  + +
Sbjct: 186  RSPNQWNPQHQNPSPLNNQNENYPQPGSRNLPSNQNQSYPHQGSPSQWNNQNTNQAQIVE 245

Query: 847  KPTSQSPPG-ADLMSLCKDGLIKETIALMSEGVPAEYDVFEVVLDSCDD---LELGKKVQ 680
               S +PP  ADLM+LC++G +KE + LM +GV A+   F  + +SC     LE  KKV 
Sbjct: 246  NQVSHAPPSVADLMNLCQEGKVKEAVELMEKGVRADAQCFYALFNSCGSPKLLEEAKKVH 305

Query: 679  QLLIRSPYYGDVTLNSKLVGLYVKCNSMRNARRVFDRMRERQDLKLWHLLINGYVDNGEA 500
               ++S +  D+ LN+K++ +Y  C SM +ARRVFD M  R D+  WHL+INGY +N   
Sbjct: 306  DFFLQSTFRSDLQLNNKVLEMYGNCGSMTDARRVFDHMTNR-DMDSWHLMINGYANNAMG 364

Query: 499  DAGLLLYEQMRELGLTPNGETFRLVLLACAGVDAVQECLIHFGSMRDKYNIVPRIEHYLG 320
            D GL LYEQMR+LGL PN +TF  VL  CA  +AV+E  IHF SM+ +Y I P  EHY+G
Sbjct: 365  DDGLQLYEQMRKLGLEPNEQTFLAVLSTCASAEAVEEGFIHFESMKTEYGITPTFEHYVG 424

Query: 319  VIDVLGNAGHLTEAVEFIENIPFEPTVEIWESLMNIARVHGDIEMEDRAEALLASLRPSM 140
            +IDVLG +GH+ EA EFIE +P EP+  +WE+LMN A++HGDI++ED AE L+ +L P  
Sbjct: 425  IIDVLGKSGHVIEAKEFIEQMPVEPSAVVWEALMNYAKIHGDIDLEDHAEELMVALDPLK 484

Query: 139  VLPDKLPL-PAGKQSANNMLEGKNKVHEYKSADQYKEDAYEKLKGLN 2
             + +K P  P  K++A NML+GKN++ E+++   YK+D  EKLK LN
Sbjct: 485  AVANKTPTPPPKKRTAINMLDGKNRLSEFRNPTLYKDD--EKLKSLN 529


>ref|XP_002514151.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223546607|gb|EEF48105.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 388

 Score =  283 bits (724), Expect = 5e-74
 Identities = 143/322 (44%), Positives = 209/322 (64%), Gaps = 8/322 (2%)
 Frame = -2

Query: 961  SKFLCTASRNDSTTRTTHRHLNPSPNRSTLRKENNLKQKPTSQSPP----GADLMSLCKD 794
            S +  + S+ +S T+   R ++ +P      +  N    P            DLMSLC +
Sbjct: 41   SSYTASKSQKNSRTKVYRRKIHQNPPTEFKVQNFNQNNDPLRGHSTVVLHNVDLMSLCDE 100

Query: 793  GLIKETIALMSEGVPAEYDVFEVVLDSCDDLEL---GKKVQQLLIRSPYYGDVTLNSKLV 623
            G ++E +  M +G  A+  VF  +LD C  L+L   GK+V + L RS +  D+ +N+KL+
Sbjct: 101  GKVEEALECMGQGASADCSVFGALLDCCGSLKLLDMGKRVHEFLRRSTFADDIEMNNKLI 160

Query: 622  GLYVKCNSMRNARRVFDRMRERQDLKLWHLLINGYVDNGEADAGLLLYEQMRELGLTPNG 443
             +Y  C S+R+ARRVFD+MRER +++ WHLLI+GY  NG+ D GLLL+E+M+E GL P+ 
Sbjct: 161  EMYGNCGSVRDARRVFDKMRER-NMRSWHLLISGYAANGQGDDGLLLFEEMKESGLRPDE 219

Query: 442  ETFRLVLLACAGVDAVQECLIHFGSMRDKYNIVPRIEHYLGVIDVLGNAGHLTEAVEFIE 263
             TF +V  AC+   A++E L+ F ++R++Y + PRI+HYLGVID+LG AGHL EA EFIE
Sbjct: 220  NTFSVVFAACSSAGAIKEGLLFFEALRNEYGMSPRIDHYLGVIDILGKAGHLCEAKEFIE 279

Query: 262  NIPFEPTVEIWESLMNIARVHGDIEMEDRAEALLASLRPSMVLPDKLPL-PAGKQSANNM 86
             +PFEPT+E+W +L + A++HGDIE+ED  + LL +L PS    +K+ L P  KQS  NM
Sbjct: 280  RMPFEPTMEVWMALRSFAQIHGDIELEDHVQQLLVALDPSEANANKIALPPRKKQSVINM 339

Query: 85   LEGKNKVHEYKSADQYKEDAYE 20
            LEGKN + EY+  + Y+E+ YE
Sbjct: 340  LEGKNSLGEYRCTEPYREEGYE 361


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