BLASTX nr result

ID: Atractylodes21_contig00024448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024448
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309083.1| predicted protein [Populus trichocarpa] gi|2...   132   2e-29
ref|XP_002271403.1| PREDICTED: uncharacterized protein LOC100259...   131   5e-29
emb|CAN60871.1| hypothetical protein VITISV_016379 [Vitis vinifera]   131   5e-29
ref|XP_002323520.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28
emb|CAN72262.1| hypothetical protein VITISV_037365 [Vitis vinifera]   129   2e-28

>ref|XP_002309083.1| predicted protein [Populus trichocarpa] gi|222855059|gb|EEE92606.1|
           predicted protein [Populus trichocarpa]
          Length = 301

 Score =  132 bits (333), Expect = 2e-29
 Identities = 87/189 (46%), Positives = 98/189 (51%), Gaps = 38/189 (20%)
 Frame = -3

Query: 460 LNSHV-------FGDSWEEQAFAEDAAGRLGGCIWPPRSYTCSFCRREFRSAQALGGHMN 302
           LNSH        F DSWEEQAFAEDAAG LGGCIWPPRSY+CSFCRREFRSAQALGGHMN
Sbjct: 16  LNSHFQASTNPSFDDSWEEQAFAEDAAGPLGGCIWPPRSYSCSFCRREFRSAQALGGHMN 75

Query: 301 VHRRDRARLKQISSP-----KTNHQ-----LLEPNTSL-LQNPNEIC------NPNFD-- 179
           VHRRDRARLKQ  SP     +  HQ     L  P  S   Q P+++C      NPN D  
Sbjct: 76  VHRRDRARLKQPPSPHNEILQQEHQSPHSHLQNPYKSFGFQYPSQLCNLVYSPNPNSDPG 135

Query: 178 ------LDQYXXXXXXXXXXXXXSILRPFTCSFTQEQPPVLSWSKFEPRKR------FHI 35
                                      PF+    +EQ      S   PR +      +HI
Sbjct: 136 PIASPPSSSRVSTTPTQENCRIKGFFPPFSSFIVEEQQKRSPRSSPPPRTKLATERCYHI 195

Query: 34  SDLGNQEKQ 8
           SDL  + +Q
Sbjct: 196 SDLSTEGEQ 204


>ref|XP_002271403.1| PREDICTED: uncharacterized protein LOC100259726 [Vitis vinifera]
          Length = 303

 Score =  131 bits (330), Expect = 5e-29
 Identities = 73/120 (60%), Positives = 81/120 (67%), Gaps = 24/120 (20%)
 Frame = -3

Query: 460 LNSHV-------FGDSWEEQAFAEDAAGRLGGCIWPPRSYTCSFCRREFRSAQALGGHMN 302
           L+SHV       + DSWEEQAFAEDAAG LGGCIWPPRSY+CSFC+REFRSAQALGGHMN
Sbjct: 16  LSSHVQASTNPSYSDSWEEQAFAEDAAGPLGGCIWPPRSYSCSFCKREFRSAQALGGHMN 75

Query: 301 VHRRDRARLKQISSPKT--------NH--QLLEPNTSL-LQNPNEIC------NPNFDLD 173
           VHRRDRARLKQ  SP          NH      P +SL  Q P+++C      NPN D D
Sbjct: 76  VHRRDRARLKQSPSPHNEILHHHHQNHHNHTQHPCSSLGFQYPSQVCTFVYNPNPNSDPD 135


>emb|CAN60871.1| hypothetical protein VITISV_016379 [Vitis vinifera]
          Length = 297

 Score =  131 bits (330), Expect = 5e-29
 Identities = 73/120 (60%), Positives = 81/120 (67%), Gaps = 24/120 (20%)
 Frame = -3

Query: 460 LNSHV-------FGDSWEEQAFAEDAAGRLGGCIWPPRSYTCSFCRREFRSAQALGGHMN 302
           L+SHV       + DSWEEQAFAEDAAG LGGCIWPPRSY+CSFC+REFRSAQALGGHMN
Sbjct: 16  LSSHVQASTNPSYSDSWEEQAFAEDAAGPLGGCIWPPRSYSCSFCKREFRSAQALGGHMN 75

Query: 301 VHRRDRARLKQISSPKT--------NH--QLLEPNTSL-LQNPNEIC------NPNFDLD 173
           VHRRDRARLKQ  SP          NH      P +SL  Q P+++C      NPN D D
Sbjct: 76  VHRRDRARLKQSPSPHNEILHHHHQNHHNHTQHPCSSLGFQYPSQVCTFVYNPNPNSDPD 135


>ref|XP_002323520.1| predicted protein [Populus trichocarpa] gi|222868150|gb|EEF05281.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score =  129 bits (325), Expect = 2e-28
 Identities = 68/102 (66%), Positives = 73/102 (71%), Gaps = 17/102 (16%)
 Frame = -3

Query: 439 DSWEEQAFAEDAAGRLGGCIWPPRSYTCSFCRREFRSAQALGGHMNVHRRDRARLKQISS 260
           DSWEEQAFAEDAAG LGGCIWPPRSY+CSFCRREFRSAQALGGHMNVHRRDRARLKQ  S
Sbjct: 30  DSWEEQAFAEDAAGPLGGCIWPPRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQSPS 89

Query: 259 P----------KTNHQLLEPNTSL-LQNPNEIC------NPN 185
           P          K  + L  P TS   Q P+++C      NPN
Sbjct: 90  PHNEILHHEHQKPLNHLQNPYTSFGFQYPSQLCTLDYCPNPN 131


>emb|CAN72262.1| hypothetical protein VITISV_037365 [Vitis vinifera]
          Length = 866

 Score =  129 bits (324), Expect = 2e-28
 Identities = 61/84 (72%), Positives = 66/84 (78%), Gaps = 6/84 (7%)
 Frame = -3

Query: 460 LNSH------VFGDSWEEQAFAEDAAGRLGGCIWPPRSYTCSFCRREFRSAQALGGHMNV 299
           LNSH      +F DSWEEQAFAEDAAG LGGC+WPPRSY+CSFCRREF+SAQALGGHMN+
Sbjct: 16  LNSHCQAPMSLFNDSWEEQAFAEDAAGALGGCVWPPRSYSCSFCRREFKSAQALGGHMNI 75

Query: 298 HRRDRARLKQISSPKTNHQLLEPN 227
           HRRDRARLKQ  SP     L   N
Sbjct: 76  HRRDRARLKQSLSPHNETDLHSQN 99


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