BLASTX nr result

ID: Atractylodes21_contig00024432 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024432
         (216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279863.2| PREDICTED: putative E3 ubiquitin-protein lig...    55   8e-06
sp|C6L7U1.2|LIN1_LOTJA RecName: Full=Putative E3 ubiquitin-prote...    55   8e-06
emb|CBI19874.3| unnamed protein product [Vitis vinifera]               55   8e-06
dbj|BAH86605.1| U-box protein with unknown function [Lotus japon...    55   8e-06
emb|CAN74785.1| hypothetical protein VITISV_011516 [Vitis vinifera]    55   8e-06

>ref|XP_002279863.2| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis
           vinifera]
          Length = 1494

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/35 (68%), Positives = 28/35 (80%)
 Frame = +2

Query: 110 PQSSERSTQSRPPKDFVCPITSHVFSDPVTLETGQ 214
           P S + + +SRPPKDFVCPIT  +FSD VTLETGQ
Sbjct: 507 PLSDKLTPRSRPPKDFVCPITGQIFSDAVTLETGQ 541


>sp|C6L7U1.2|LIN1_LOTJA RecName: Full=Putative E3 ubiquitin-protein ligase LIN-1; AltName:
           Full=Protein cerberus
          Length = 1485

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/49 (57%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
 Frame = +2

Query: 71  LGEYDTRSPNFGS-PQSSERSTQSRPPKDFVCPITSHVFSDPVTLETGQ 214
           L E D    +F S P+  + S  S+PPKDFVCPIT  +F DPVTLETGQ
Sbjct: 486 LCESDDGYQSFNSLPKLEKLSMGSKPPKDFVCPITGQIFCDPVTLETGQ 534


>emb|CBI19874.3| unnamed protein product [Vitis vinifera]
          Length = 1510

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/35 (68%), Positives = 28/35 (80%)
 Frame = +2

Query: 110 PQSSERSTQSRPPKDFVCPITSHVFSDPVTLETGQ 214
           P S + + +SRPPKDFVCPIT  +FSD VTLETGQ
Sbjct: 523 PLSDKLTPRSRPPKDFVCPITGQIFSDAVTLETGQ 557


>dbj|BAH86605.1| U-box protein with unknown function [Lotus japonicus]
           gi|254749430|dbj|BAH86606.1| U-box protein with unknown
           function [Lotus japonicus]
          Length = 1477

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/49 (57%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
 Frame = +2

Query: 71  LGEYDTRSPNFGS-PQSSERSTQSRPPKDFVCPITSHVFSDPVTLETGQ 214
           L E D    +F S P+  + S  S+PPKDFVCPIT  +F DPVTLETGQ
Sbjct: 478 LCESDDGYQSFNSLPKLEKLSMGSKPPKDFVCPITGQIFCDPVTLETGQ 526


>emb|CAN74785.1| hypothetical protein VITISV_011516 [Vitis vinifera]
          Length = 1494

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/35 (68%), Positives = 28/35 (80%)
 Frame = +2

Query: 110 PQSSERSTQSRPPKDFVCPITSHVFSDPVTLETGQ 214
           P S + + +SRPPKDFVCPIT  +FSD VTLETGQ
Sbjct: 507 PLSDKLTPRSRPPKDFVCPITGQIFSDAVTLETGQ 541


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