BLASTX nr result

ID: Atractylodes21_contig00024412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024412
         (589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17162.3| unnamed protein product [Vitis vinifera]              216   2e-54
ref|XP_004152166.1| PREDICTED: 50S ribosomal protein L18-like is...   209   4e-52
ref|XP_002331445.1| predicted protein [Populus trichocarpa] gi|2...   208   5e-52
ref|XP_004165546.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosoma...   207   1e-51
ref|XP_002523696.1| conserved hypothetical protein [Ricinus comm...   207   1e-51

>emb|CBI17162.3| unnamed protein product [Vitis vinifera]
          Length = 127

 Score =  216 bits (551), Expect = 2e-54
 Identities = 103/124 (83%), Positives = 118/124 (95%)
 Frame = -3

Query: 482 MTVLKRYVLRLFMSLKYVTANIVDRNNGRIVATASTVEHSIKTSLECGRTCNAKAATVVG 303
           MTVLKRYVLRLF+SLKY+TAN+VDRNNGRI+ATASTVEH+IK SLECGR+CNAKAA VVG
Sbjct: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRIIATASTVEHAIKGSLECGRSCNAKAAGVVG 60

Query: 302 EVLAMRLKVEGLESGQGRGIHVDVNKELEKKDFKNRTKVWAIINSLKNNGVKLILDENND 123
           EVLAMRLKVEGLE GQGRGIHVDVNKE+EKK FKNRTK+WA++N LKNNG+KLILD++ +
Sbjct: 61  EVLAMRLKVEGLEEGQGRGIHVDVNKEVEKKGFKNRTKIWAVVNGLKNNGIKLILDDDEN 120

Query: 122 ASRP 111
           +SRP
Sbjct: 121 SSRP 124


>ref|XP_004152166.1| PREDICTED: 50S ribosomal protein L18-like isoform 1 [Cucumis
           sativus] gi|449468916|ref|XP_004152167.1| PREDICTED: 50S
           ribosomal protein L18-like isoform 2 [Cucumis sativus]
          Length = 129

 Score =  209 bits (531), Expect = 4e-52
 Identities = 99/120 (82%), Positives = 111/120 (92%)
 Frame = -3

Query: 482 MTVLKRYVLRLFMSLKYVTANIVDRNNGRIVATASTVEHSIKTSLECGRTCNAKAATVVG 303
           MT+LKRYVLRLF+SLKY+TAN+VDRNNGR+VATASTVEHSIK SLECGR+CNAKAA +VG
Sbjct: 1   MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVG 60

Query: 302 EVLAMRLKVEGLESGQGRGIHVDVNKELEKKDFKNRTKVWAIINSLKNNGVKLILDENND 123
           EVLAMRLKV+GLE GQGRGIH D+ KE+EKK FKN TK+WAI+NSLKNNGVKLILD N D
Sbjct: 61  EVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIWAIVNSLKNNGVKLILDNNVD 120


>ref|XP_002331445.1| predicted protein [Populus trichocarpa] gi|222873523|gb|EEF10654.1|
           predicted protein [Populus trichocarpa]
          Length = 128

 Score =  208 bits (530), Expect = 5e-52
 Identities = 102/125 (81%), Positives = 117/125 (93%), Gaps = 1/125 (0%)
 Frame = -3

Query: 482 MTVLKRYVLRLFMSLKYVTANIVDRNNGRIVATASTVEHSIKTSLECGRTCNAKAATVVG 303
           MT+LKRYVLRLF+SLKY+TAN+VDR NGRIVATASTVEHSIK +LECGR+CNAK+ATVVG
Sbjct: 1   MTLLKRYVLRLFISLKYITANVVDRKNGRIVATASTVEHSIKNTLECGRSCNAKSATVVG 60

Query: 302 EVLAMRLKVEGLESGQGRGIHVDVNKELEKKDFKNRTKVWAIINSLKNNGVKLILDENN- 126
           EVLAMRLKV GLE GQGRGIHVD+ KE+EKK FKNRTK+WAI+N+LKNNGVK+ILDE+N 
Sbjct: 61  EVLAMRLKVGGLEQGQGRGIHVDMEKEVEKKGFKNRTKIWAIVNALKNNGVKIILDEDNV 120

Query: 125 DASRP 111
           + SRP
Sbjct: 121 NTSRP 125


>ref|XP_004165546.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosomal protein L18-like
           [Cucumis sativus]
          Length = 129

 Score =  207 bits (527), Expect = 1e-51
 Identities = 99/120 (82%), Positives = 110/120 (91%)
 Frame = -3

Query: 482 MTVLKRYVLRLFMSLKYVTANIVDRNNGRIVATASTVEHSIKTSLECGRTCNAKAATVVG 303
           MT+LKRYVLRLF+SLKY+TAN+VDRNNGR+VATASTVEHSIK SLECGR+CNAKAA +VG
Sbjct: 1   MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVG 60

Query: 302 EVLAMRLKVEGLESGQGRGIHVDVNKELEKKDFKNRTKVWAIINSLKNNGVKLILDENND 123
           EVLAMRLKV+GLE GQGRGIH D  KE+EKK FKN TK+WAI+NSLKNNGVKLILD N D
Sbjct: 61  EVLAMRLKVDGLEQGQGRGIHADXKKEIEKKGFKNHTKIWAIVNSLKNNGVKLILDNNVD 120


>ref|XP_002523696.1| conserved hypothetical protein [Ricinus communis]
           gi|223537000|gb|EEF38636.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 129

 Score =  207 bits (527), Expect = 1e-51
 Identities = 98/123 (79%), Positives = 116/123 (94%)
 Frame = -3

Query: 482 MTVLKRYVLRLFMSLKYVTANIVDRNNGRIVATASTVEHSIKTSLECGRTCNAKAATVVG 303
           MTVLKRYVLR+F+SLKY+TAN+VDRNNGRIVATASTVEHSIK +LECGR+CNAKAA +VG
Sbjct: 1   MTVLKRYVLRMFISLKYITANVVDRNNGRIVATASTVEHSIKNTLECGRSCNAKAAAIVG 60

Query: 302 EVLAMRLKVEGLESGQGRGIHVDVNKELEKKDFKNRTKVWAIINSLKNNGVKLILDENND 123
           EVLAMRLKVEGLE GQGRGIHVD NKE+EKK FKNRTK+WAIIN+L+NNGVK+I ++N++
Sbjct: 61  EVLAMRLKVEGLEQGQGRGIHVDANKEVEKKGFKNRTKIWAIINALRNNGVKVISNDNDE 120

Query: 122 ASR 114
            ++
Sbjct: 121 NNK 123


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