BLASTX nr result

ID: Atractylodes21_contig00024395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024395
         (651 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADK63410.1| C3HC4 type zinc finger protein [Brassica rapa]         140   2e-31
ref|XP_002297615.1| predicted protein [Populus trichocarpa] gi|2...   140   3e-31
ref|XP_002303979.1| predicted protein [Populus trichocarpa] gi|2...   139   5e-31
ref|XP_003552191.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   137   2e-30
gb|ACU20614.1| unknown [Glycine max]                                  137   2e-30

>gb|ADK63410.1| C3HC4 type zinc finger protein [Brassica rapa]
          Length = 312

 Score =  140 bits (353), Expect = 2e-31
 Identities = 57/78 (73%), Positives = 72/78 (92%)
 Frame = +1

Query: 1   DPNRYGTQPAQKEAVEAMPTVTIEEDSIQCSICLEEFEVGSKAREMPCKHRFHGDCILPW 180
           DPNRYGT PAQKEAVEA+ +V I+E ++QCS+CL+EFE+G +A+EMPC+H+FHG+C+LPW
Sbjct: 155 DPNRYGTPPAQKEAVEALASVKIQEPTLQCSVCLDEFEIGVEAKEMPCEHKFHGECLLPW 214

Query: 181 LELHCSCPVCRYELPADE 234
           LELH SCPVCRYELP+DE
Sbjct: 215 LELHSSCPVCRYELPSDE 232


>ref|XP_002297615.1| predicted protein [Populus trichocarpa] gi|222844873|gb|EEE82420.1|
           predicted protein [Populus trichocarpa]
          Length = 340

 Score =  140 bits (352), Expect = 3e-31
 Identities = 61/78 (78%), Positives = 71/78 (91%)
 Frame = +1

Query: 1   DPNRYGTQPAQKEAVEAMPTVTIEEDSIQCSICLEEFEVGSKAREMPCKHRFHGDCILPW 180
           DPNRYGT PAQKEAVEA+PTV I+E  +QCS+CL++FE+GSKAREMPCKH+FH  CILPW
Sbjct: 199 DPNRYGTLPAQKEAVEALPTVIIKEP-LQCSVCLDDFEIGSKAREMPCKHKFHSGCILPW 257

Query: 181 LELHCSCPVCRYELPADE 234
           LELH SCPVCR++LPADE
Sbjct: 258 LELHSSCPVCRHQLPADE 275


>ref|XP_002303979.1| predicted protein [Populus trichocarpa] gi|222841411|gb|EEE78958.1|
           predicted protein [Populus trichocarpa]
          Length = 356

 Score =  139 bits (350), Expect = 5e-31
 Identities = 58/78 (74%), Positives = 72/78 (92%)
 Frame = +1

Query: 1   DPNRYGTQPAQKEAVEAMPTVTIEEDSIQCSICLEEFEVGSKAREMPCKHRFHGDCILPW 180
           DPNRYGT PAQKEA+EA+PTVT++E  +QCS+CL++FE+G++AREMPCKH+FH  CILPW
Sbjct: 211 DPNRYGTPPAQKEAIEALPTVTVKEP-LQCSVCLDDFEIGAEAREMPCKHKFHSGCILPW 269

Query: 181 LELHCSCPVCRYELPADE 234
           LELH SCPVCR++LPADE
Sbjct: 270 LELHSSCPVCRHQLPADE 287


>ref|XP_003552191.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
          Length = 344

 Score =  137 bits (344), Expect = 2e-30
 Identities = 60/78 (76%), Positives = 69/78 (88%)
 Frame = +1

Query: 1   DPNRYGTQPAQKEAVEAMPTVTIEEDSIQCSICLEEFEVGSKAREMPCKHRFHGDCILPW 180
           DPNRYGT PAQKEA+EA+PTV I E+S QCS+CL++FEVGS+A+EMPCKHRFH  CILPW
Sbjct: 209 DPNRYGTPPAQKEAIEALPTVIINENS-QCSVCLDDFEVGSEAKEMPCKHRFHSGCILPW 267

Query: 181 LELHCSCPVCRYELPADE 234
           LELH SCPVCR +LP DE
Sbjct: 268 LELHSSCPVCRLQLPLDE 285


>gb|ACU20614.1| unknown [Glycine max]
          Length = 188

 Score =  137 bits (344), Expect = 2e-30
 Identities = 60/78 (76%), Positives = 69/78 (88%)
 Frame = +1

Query: 1   DPNRYGTQPAQKEAVEAMPTVTIEEDSIQCSICLEEFEVGSKAREMPCKHRFHGDCILPW 180
           DPNRYGT PAQKEA+EA+PTV I E+S QCS+CL++FEVGS+A+EMPCKHRFH  CILPW
Sbjct: 53  DPNRYGTPPAQKEAIEALPTVIINENS-QCSVCLDDFEVGSEAKEMPCKHRFHSGCILPW 111

Query: 181 LELHCSCPVCRYELPADE 234
           LELH SCPVCR +LP DE
Sbjct: 112 LELHSSCPVCRLQLPLDE 129


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