BLASTX nr result

ID: Atractylodes21_contig00024320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024320
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298807.1| predicted protein [Populus trichocarpa] gi|2...   127   1e-27
gb|ACJ54183.1| PB1 domain-containing protein [Nicotiana benthami...   126   2e-27
ref|XP_002263901.1| PREDICTED: uncharacterized protein LOC100254...   125   5e-27
ref|XP_002527342.1| hypothetical protein RCOM_0482310 [Ricinus c...   122   3e-26
ref|XP_002866615.1| hypothetical protein ARALYDRAFT_496651 [Arab...   122   4e-26

>ref|XP_002298807.1| predicted protein [Populus trichocarpa] gi|222846065|gb|EEE83612.1|
           predicted protein [Populus trichocarpa]
          Length = 479

 Score =  127 bits (318), Expect = 1e-27
 Identities = 67/114 (58%), Positives = 79/114 (69%)
 Frame = -3

Query: 343 NQNYPKSKSMEKVKLMCSYGGRIQPRPHDLQLSYFGGHTKILTVDRNINFTNLLSKLQAL 164
           +QNY       KVK MCSYGG+I PRPHD QLSY GG TKIL VDRN+ F  ++SKL AL
Sbjct: 38  SQNY-------KVKFMCSYGGKIHPRPHDNQLSYMGGETKILAVDRNLKFPVMISKLSAL 90

Query: 163 CDFNLEIQVKYKLPDQDLEALISVFXXXXXDHMMFEYDLLRSVSAKPARFRLFL 2
           C  + ++  KY+LP +DL+ALISV      +HMM EYD L   SAKPAR RLFL
Sbjct: 91  CG-DTDVAFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRASAKPARMRLFL 143


>gb|ACJ54183.1| PB1 domain-containing protein [Nicotiana benthamiana]
          Length = 254

 Score =  126 bits (316), Expect = 2e-27
 Identities = 65/106 (61%), Positives = 78/106 (73%)
 Frame = -3

Query: 319 SMEKVKLMCSYGGRIQPRPHDLQLSYFGGHTKILTVDRNINFTNLLSKLQALCDFNLEIQ 140
           S  KVK MCSYGG+I PRPHD QL+Y GG TKIL+VDRNI F+NL++KL ++ D   E+ 
Sbjct: 35  SSYKVKFMCSYGGKIHPRPHDNQLAYVGGETKILSVDRNIRFSNLITKLSSISD--CEVC 92

Query: 139 VKYKLPDQDLEALISVFXXXXXDHMMFEYDLLRSVSAKPARFRLFL 2
            KY+LP +DL+ALISV      +HMM EYD L   SAKPAR RLFL
Sbjct: 93  FKYQLPGEDLDALISVTNDEDLEHMMLEYDRLYRGSAKPARLRLFL 138


>ref|XP_002263901.1| PREDICTED: uncharacterized protein LOC100254138 [Vitis vinifera]
          Length = 467

 Score =  125 bits (313), Expect = 5e-27
 Identities = 65/103 (63%), Positives = 78/103 (75%)
 Frame = -3

Query: 310 KVKLMCSYGGRIQPRPHDLQLSYFGGHTKILTVDRNINFTNLLSKLQALCDFNLEIQVKY 131
           KVK MCSYGG+IQPRPHD QLSY GG TKIL+VDR+I F+ L++KL ALC+   ++  KY
Sbjct: 42  KVKFMCSYGGKIQPRPHDNQLSYTGGETKILSVDRSIKFSPLINKLCALCE--ADVCFKY 99

Query: 130 KLPDQDLEALISVFXXXXXDHMMFEYDLLRSVSAKPARFRLFL 2
           +LP +DL+ALISV      +HMM EYD L   SAKPAR RLFL
Sbjct: 100 QLPGEDLDALISVTNDDDLEHMMHEYDRLCRPSAKPARLRLFL 142


>ref|XP_002527342.1| hypothetical protein RCOM_0482310 [Ricinus communis]
           gi|223533261|gb|EEF35014.1| hypothetical protein
           RCOM_0482310 [Ricinus communis]
          Length = 415

 Score =  122 bits (306), Expect = 3e-26
 Identities = 66/116 (56%), Positives = 79/116 (68%), Gaps = 1/116 (0%)
 Frame = -3

Query: 346 SNQNYPKSKSMEKVKLMCSYGGRIQPRPHDLQLSYFGGHTKILTVDRNINFTNLLSKLQA 167
           +N NY       KVK MCSYGG+IQPRPHD QL+Y GG TKIL V+RNI F+  +SK  +
Sbjct: 39  NNNNY-------KVKFMCSYGGKIQPRPHDNQLAYIGGDTKILAVERNIKFSLFISKFAS 91

Query: 166 LCDF-NLEIQVKYKLPDQDLEALISVFXXXXXDHMMFEYDLLRSVSAKPARFRLFL 2
           LC+  +  I  KY+LP +DL+ALISV      +HMM EYD L   SAKPAR RLFL
Sbjct: 92  LCNTDHHHICFKYQLPGEDLDALISVTNDEDLEHMMLEYDRLYRASAKPARLRLFL 147


>ref|XP_002866615.1| hypothetical protein ARALYDRAFT_496651 [Arabidopsis lyrata subsp.
           lyrata] gi|297312450|gb|EFH42874.1| hypothetical protein
           ARALYDRAFT_496651 [Arabidopsis lyrata subsp. lyrata]
          Length = 502

 Score =  122 bits (305), Expect = 4e-26
 Identities = 64/118 (54%), Positives = 80/118 (67%), Gaps = 4/118 (3%)
 Frame = -3

Query: 343 NQNYPKSKSMEKVKLMCSYGGRIQPRPHDLQLSYFGGHTKILTVDRNINFTNLLSKLQAL 164
           +QN  + +   KV+ MCSYGG+IQPRPHD QL+Y  G TKIL+VDR I F +L SKL A+
Sbjct: 32  DQNQNQQQQSYKVRFMCSYGGKIQPRPHDNQLTYVNGETKILSVDRGIRFPDLASKLSAV 91

Query: 163 C----DFNLEIQVKYKLPDQDLEALISVFXXXXXDHMMFEYDLLRSVSAKPARFRLFL 2
           C        E+  KY+LP +DL+ALISV      +HMM EYD L  +S+KPAR RLFL
Sbjct: 92  CGGGDGGGGEVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLLRLSSKPARMRLFL 149


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