BLASTX nr result

ID: Atractylodes21_contig00024275 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024275
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314654.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
gb|ABK95475.1| unknown [Populus trichocarpa]                           91   1e-16
ref|XP_002312568.1| predicted protein [Populus trichocarpa] gi|2...    89   5e-16
emb|CBI26363.3| unnamed protein product [Vitis vinifera]               88   8e-16
ref|XP_002284221.1| PREDICTED: DNA-directed RNA polymerase II su...    88   8e-16

>ref|XP_002314654.1| predicted protein [Populus trichocarpa] gi|222863694|gb|EEF00825.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 43/81 (53%), Positives = 59/81 (72%)
 Frame = +3

Query: 3   GEVIDGVVHTILEDGVILRCGPMNNIYLTKFTLIGHEYQVAEPPFFLNSKTGSKIEKDAS 182
           GE+++GVVH +L+ GV+LRCGP+ NIYL+   ++ + Y   E P FLN KT SKIEKD  
Sbjct: 103 GEILEGVVHKVLKHGVLLRCGPIENIYLSSMKMLDYRYVPGENPVFLNDKT-SKIEKDVV 161

Query: 183 VRCIVMDVQYIEDVREFQALV 245
           VR +V+  +++E  REFQALV
Sbjct: 162 VRFVVLGTKWLEAEREFQALV 182


>gb|ABK95475.1| unknown [Populus trichocarpa]
          Length = 176

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 43/81 (53%), Positives = 59/81 (72%)
 Frame = +3

Query: 3   GEVIDGVVHTILEDGVILRCGPMNNIYLTKFTLIGHEYQVAEPPFFLNSKTGSKIEKDAS 182
           GE+++GVVH +L+ GV+LRCGP+ NIYL+   ++ + Y   E P FLN KT SKIEKD  
Sbjct: 86  GEILEGVVHKVLKHGVLLRCGPIENIYLSSMKMLDYRYVPGENPVFLNDKT-SKIEKDVV 144

Query: 183 VRCIVMDVQYIEDVREFQALV 245
           VR +V+  +++E  REFQALV
Sbjct: 145 VRFVVLGTKWLEAEREFQALV 165


>ref|XP_002312568.1| predicted protein [Populus trichocarpa] gi|222852388|gb|EEE89935.1|
           predicted protein [Populus trichocarpa]
          Length = 176

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 43/81 (53%), Positives = 58/81 (71%)
 Frame = +3

Query: 3   GEVIDGVVHTILEDGVILRCGPMNNIYLTKFTLIGHEYQVAEPPFFLNSKTGSKIEKDAS 182
           GE++DG+VH +L+ GV+LRCGP+ NIYL+   +  + Y   E P FLN KT SKIEKD  
Sbjct: 86  GEILDGIVHKVLKHGVLLRCGPIENIYLSCMKMPDYRYVPGENPVFLNDKT-SKIEKDVV 144

Query: 183 VRCIVMDVQYIEDVREFQALV 245
           VR +V+  +++E  REFQALV
Sbjct: 145 VRFVVLGTKWLEAEREFQALV 165


>emb|CBI26363.3| unnamed protein product [Vitis vinifera]
          Length = 242

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 46/81 (56%), Positives = 57/81 (70%)
 Frame = +3

Query: 3   GEVIDGVVHTILEDGVILRCGPMNNIYLTKFTLIGHEYQVAEPPFFLNSKTGSKIEKDAS 182
           GE++DGVVH +L+ GVILRCGP+ NIYL+   +  + Y   E P FLN K  SKIEKD  
Sbjct: 151 GEILDGVVHKVLKHGVILRCGPVENIYLSCQKMPDYRYVPGENPVFLNEKL-SKIEKDVV 209

Query: 183 VRCIVMDVQYIEDVREFQALV 245
           VR IVM  +++E  REFQALV
Sbjct: 210 VRFIVMGTKWLEAEREFQALV 230


>ref|XP_002284221.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Vitis
           vinifera] gi|147822056|emb|CAN61549.1| hypothetical
           protein VITISV_043525 [Vitis vinifera]
          Length = 177

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 46/81 (56%), Positives = 57/81 (70%)
 Frame = +3

Query: 3   GEVIDGVVHTILEDGVILRCGPMNNIYLTKFTLIGHEYQVAEPPFFLNSKTGSKIEKDAS 182
           GE++DGVVH +L+ GVILRCGP+ NIYL+   +  + Y   E P FLN K  SKIEKD  
Sbjct: 86  GEILDGVVHKVLKHGVILRCGPVENIYLSCQKMPDYRYVPGENPVFLNEKL-SKIEKDVV 144

Query: 183 VRCIVMDVQYIEDVREFQALV 245
           VR IVM  +++E  REFQALV
Sbjct: 145 VRFIVMGTKWLEAEREFQALV 165


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