BLASTX nr result
ID: Atractylodes21_contig00024275
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes21_contig00024275 (320 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002314654.1| predicted protein [Populus trichocarpa] gi|2... 91 1e-16 gb|ABK95475.1| unknown [Populus trichocarpa] 91 1e-16 ref|XP_002312568.1| predicted protein [Populus trichocarpa] gi|2... 89 5e-16 emb|CBI26363.3| unnamed protein product [Vitis vinifera] 88 8e-16 ref|XP_002284221.1| PREDICTED: DNA-directed RNA polymerase II su... 88 8e-16 >ref|XP_002314654.1| predicted protein [Populus trichocarpa] gi|222863694|gb|EEF00825.1| predicted protein [Populus trichocarpa] Length = 193 Score = 90.5 bits (223), Expect = 1e-16 Identities = 43/81 (53%), Positives = 59/81 (72%) Frame = +3 Query: 3 GEVIDGVVHTILEDGVILRCGPMNNIYLTKFTLIGHEYQVAEPPFFLNSKTGSKIEKDAS 182 GE+++GVVH +L+ GV+LRCGP+ NIYL+ ++ + Y E P FLN KT SKIEKD Sbjct: 103 GEILEGVVHKVLKHGVLLRCGPIENIYLSSMKMLDYRYVPGENPVFLNDKT-SKIEKDVV 161 Query: 183 VRCIVMDVQYIEDVREFQALV 245 VR +V+ +++E REFQALV Sbjct: 162 VRFVVLGTKWLEAEREFQALV 182 >gb|ABK95475.1| unknown [Populus trichocarpa] Length = 176 Score = 90.5 bits (223), Expect = 1e-16 Identities = 43/81 (53%), Positives = 59/81 (72%) Frame = +3 Query: 3 GEVIDGVVHTILEDGVILRCGPMNNIYLTKFTLIGHEYQVAEPPFFLNSKTGSKIEKDAS 182 GE+++GVVH +L+ GV+LRCGP+ NIYL+ ++ + Y E P FLN KT SKIEKD Sbjct: 86 GEILEGVVHKVLKHGVLLRCGPIENIYLSSMKMLDYRYVPGENPVFLNDKT-SKIEKDVV 144 Query: 183 VRCIVMDVQYIEDVREFQALV 245 VR +V+ +++E REFQALV Sbjct: 145 VRFVVLGTKWLEAEREFQALV 165 >ref|XP_002312568.1| predicted protein [Populus trichocarpa] gi|222852388|gb|EEE89935.1| predicted protein [Populus trichocarpa] Length = 176 Score = 88.6 bits (218), Expect = 5e-16 Identities = 43/81 (53%), Positives = 58/81 (71%) Frame = +3 Query: 3 GEVIDGVVHTILEDGVILRCGPMNNIYLTKFTLIGHEYQVAEPPFFLNSKTGSKIEKDAS 182 GE++DG+VH +L+ GV+LRCGP+ NIYL+ + + Y E P FLN KT SKIEKD Sbjct: 86 GEILDGIVHKVLKHGVLLRCGPIENIYLSCMKMPDYRYVPGENPVFLNDKT-SKIEKDVV 144 Query: 183 VRCIVMDVQYIEDVREFQALV 245 VR +V+ +++E REFQALV Sbjct: 145 VRFVVLGTKWLEAEREFQALV 165 >emb|CBI26363.3| unnamed protein product [Vitis vinifera] Length = 242 Score = 87.8 bits (216), Expect = 8e-16 Identities = 46/81 (56%), Positives = 57/81 (70%) Frame = +3 Query: 3 GEVIDGVVHTILEDGVILRCGPMNNIYLTKFTLIGHEYQVAEPPFFLNSKTGSKIEKDAS 182 GE++DGVVH +L+ GVILRCGP+ NIYL+ + + Y E P FLN K SKIEKD Sbjct: 151 GEILDGVVHKVLKHGVILRCGPVENIYLSCQKMPDYRYVPGENPVFLNEKL-SKIEKDVV 209 Query: 183 VRCIVMDVQYIEDVREFQALV 245 VR IVM +++E REFQALV Sbjct: 210 VRFIVMGTKWLEAEREFQALV 230 >ref|XP_002284221.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Vitis vinifera] gi|147822056|emb|CAN61549.1| hypothetical protein VITISV_043525 [Vitis vinifera] Length = 177 Score = 87.8 bits (216), Expect = 8e-16 Identities = 46/81 (56%), Positives = 57/81 (70%) Frame = +3 Query: 3 GEVIDGVVHTILEDGVILRCGPMNNIYLTKFTLIGHEYQVAEPPFFLNSKTGSKIEKDAS 182 GE++DGVVH +L+ GVILRCGP+ NIYL+ + + Y E P FLN K SKIEKD Sbjct: 86 GEILDGVVHKVLKHGVILRCGPVENIYLSCQKMPDYRYVPGENPVFLNEKL-SKIEKDVV 144 Query: 183 VRCIVMDVQYIEDVREFQALV 245 VR IVM +++E REFQALV Sbjct: 145 VRFIVMGTKWLEAEREFQALV 165