BLASTX nr result

ID: Atractylodes21_contig00024255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024255
         (666 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516387.1| prokaryotic DNA topoisomerase, putative [Ric...   307   1e-81
ref|XP_002264970.2| PREDICTED: DNA topoisomerase 3-beta-1-like [...   299   3e-79
emb|CBI39422.3| unnamed protein product [Vitis vinifera]              299   3e-79
ref|XP_004147675.1| PREDICTED: DNA topoisomerase 3-beta-1-like [...   291   8e-77
ref|XP_004160658.1| PREDICTED: DNA topoisomerase 3-beta-1-like [...   290   2e-76

>ref|XP_002516387.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
           gi|223544485|gb|EEF46004.1| prokaryotic DNA
           topoisomerase, putative [Ricinus communis]
          Length = 865

 Score =  307 bits (786), Expect = 1e-81
 Identities = 148/192 (77%), Positives = 165/192 (85%), Gaps = 1/192 (0%)
 Frame = +2

Query: 92  VAEKPSIALSIATALXXXXXXXXXXXTEVHEFDGTFLGYRVQYRVTSVIGHVFSVDFPPA 271
           VAEKPSIALSIA+AL           TEVHEFDG FLG++  Y+VTSVIGH+FSVDFP  
Sbjct: 9   VAEKPSIALSIASALSHGQMSSKKGGTEVHEFDGMFLGFQAHYKVTSVIGHIFSVDFPQK 68

Query: 272 YQDWAATDPLSLFQAPVVKSESNPKAHIRQHLNREARGCGDLVLWLDCDREGENICFEVI 451
           YQDW A DP+ LFQAP+VK+ESNPK HIR+HL++EARGCG LVLWLDCDREGENICFEVI
Sbjct: 69  YQDWTANDPMDLFQAPIVKAESNPKVHIRRHLSQEARGCGHLVLWLDCDREGENICFEVI 128

Query: 452 ECTGFHANDG-RRVHRARFSSVTEKDIIHAMKNLVEPNKDEALAVDARQEIDLKVGVAFT 628
           ECTGFH ND  RRV+RARFSSV EKDI+ AM NLV+PN+DEALAVDARQEIDLKVGVAFT
Sbjct: 129 ECTGFHLNDSRRRVYRARFSSVAEKDILKAMDNLVQPNRDEALAVDARQEIDLKVGVAFT 188

Query: 629 RFQTTYFQGKYG 664
           RFQT++FQGKYG
Sbjct: 189 RFQTSFFQGKYG 200


>ref|XP_002264970.2| PREDICTED: DNA topoisomerase 3-beta-1-like [Vitis vinifera]
          Length = 894

 Score =  299 bits (766), Expect = 3e-79
 Identities = 149/194 (76%), Positives = 164/194 (84%), Gaps = 3/194 (1%)
 Frame = +2

Query: 92  VAEKPSIALSIATALXXXXXXXXXXX--TEVHEFDGTFLGYRVQYRVTSVIGHVFSVDFP 265
           VAEKPSIALSIA+AL             TEVHEF+GTF G   QY+VTSVIGHVFSVDFP
Sbjct: 35  VAEKPSIALSIASALSGGHMSTRRGGSSTEVHEFNGTFRGSNAQYKVTSVIGHVFSVDFP 94

Query: 266 PAYQDWAATDPLSLFQAPVVKSESNPKAHIRQHLNREARGCGDLVLWLDCDREGENICFE 445
             YQDW  TDPL LFQAP++K+ESNPKAHIR+HL++EAR CG LVLWLDCDREGENICFE
Sbjct: 95  AKYQDWTVTDPLDLFQAPILKAESNPKAHIRRHLSQEARDCGHLVLWLDCDREGENICFE 154

Query: 446 VIECTGFHANDG-RRVHRARFSSVTEKDIIHAMKNLVEPNKDEALAVDARQEIDLKVGVA 622
           V+ECTGFH N+  RRV+RARFSSVTEKDI+ AM NLVEPN+DEA AVDARQEIDLKVGVA
Sbjct: 155 VVECTGFHGNEARRRVYRARFSSVTEKDILKAMDNLVEPNEDEARAVDARQEIDLKVGVA 214

Query: 623 FTRFQTTYFQGKYG 664
           FTRFQT+YFQGKYG
Sbjct: 215 FTRFQTSYFQGKYG 228


>emb|CBI39422.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  299 bits (766), Expect = 3e-79
 Identities = 149/194 (76%), Positives = 164/194 (84%), Gaps = 3/194 (1%)
 Frame = +2

Query: 92  VAEKPSIALSIATALXXXXXXXXXXX--TEVHEFDGTFLGYRVQYRVTSVIGHVFSVDFP 265
           VAEKPSIALSIA+AL             TEVHEF+GTF G   QY+VTSVIGHVFSVDFP
Sbjct: 51  VAEKPSIALSIASALSGGHMSTRRGGSSTEVHEFNGTFRGSNAQYKVTSVIGHVFSVDFP 110

Query: 266 PAYQDWAATDPLSLFQAPVVKSESNPKAHIRQHLNREARGCGDLVLWLDCDREGENICFE 445
             YQDW  TDPL LFQAP++K+ESNPKAHIR+HL++EAR CG LVLWLDCDREGENICFE
Sbjct: 111 AKYQDWTVTDPLDLFQAPILKAESNPKAHIRRHLSQEARDCGHLVLWLDCDREGENICFE 170

Query: 446 VIECTGFHANDG-RRVHRARFSSVTEKDIIHAMKNLVEPNKDEALAVDARQEIDLKVGVA 622
           V+ECTGFH N+  RRV+RARFSSVTEKDI+ AM NLVEPN+DEA AVDARQEIDLKVGVA
Sbjct: 171 VVECTGFHGNEARRRVYRARFSSVTEKDILKAMDNLVEPNEDEARAVDARQEIDLKVGVA 230

Query: 623 FTRFQTTYFQGKYG 664
           FTRFQT+YFQGKYG
Sbjct: 231 FTRFQTSYFQGKYG 244


>ref|XP_004147675.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Cucumis sativus]
          Length = 867

 Score =  291 bits (745), Expect = 8e-77
 Identities = 145/192 (75%), Positives = 161/192 (83%), Gaps = 1/192 (0%)
 Frame = +2

Query: 92  VAEKPSIALSIATALXXXXXXXXXXXTEVHEFDGTFLGYRVQYRVTSVIGHVFSVDFPPA 271
           VAEKPSIALSIA+AL           TEVHEFDG FLG+   Y+VTSVIGHVFS+DF   
Sbjct: 9   VAEKPSIALSIASALSHGQMSTRKGSTEVHEFDGRFLGHHAYYKVTSVIGHVFSIDFQAG 68

Query: 272 YQDWAATDPLSLFQAPVVKSESNPKAHIRQHLNREARGCGDLVLWLDCDREGENICFEVI 451
           +QDW +TDPL LFQA V+K+ESNPKAHI QHL+REARGC  LVLWLDCDREGENICFEVI
Sbjct: 69  FQDWKSTDPLDLFQASVIKTESNPKAHICQHLSREARGCDCLVLWLDCDREGENICFEVI 128

Query: 452 ECTGFHANDGR-RVHRARFSSVTEKDIIHAMKNLVEPNKDEALAVDARQEIDLKVGVAFT 628
           ECTGF  N  R +V+RARFSSVTEKDI+ A+ NLVEPN++EALAVDARQEIDLKVGVAFT
Sbjct: 129 ECTGFGGNGTRKKVYRARFSSVTEKDILKALDNLVEPNRNEALAVDARQEIDLKVGVAFT 188

Query: 629 RFQTTYFQGKYG 664
           RFQTT+FQGKYG
Sbjct: 189 RFQTTFFQGKYG 200


>ref|XP_004160658.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Cucumis sativus]
          Length = 864

 Score =  290 bits (741), Expect = 2e-76
 Identities = 144/192 (75%), Positives = 161/192 (83%), Gaps = 1/192 (0%)
 Frame = +2

Query: 92  VAEKPSIALSIATALXXXXXXXXXXXTEVHEFDGTFLGYRVQYRVTSVIGHVFSVDFPPA 271
           VAEKPSIALSIA+AL           TEVHEFDG FLG+   Y+VTSVIGHVFS+DF   
Sbjct: 6   VAEKPSIALSIASALSHGQMSTRKGSTEVHEFDGRFLGHHAYYKVTSVIGHVFSIDFQAG 65

Query: 272 YQDWAATDPLSLFQAPVVKSESNPKAHIRQHLNREARGCGDLVLWLDCDREGENICFEVI 451
           +QDW +TDPL LFQA V+K+ESNPKAHI QHL+REARGC  LVLWLDCDREGENICFEVI
Sbjct: 66  FQDWKSTDPLDLFQASVIKTESNPKAHICQHLSREARGCDCLVLWLDCDREGENICFEVI 125

Query: 452 ECTGFHANDGR-RVHRARFSSVTEKDIIHAMKNLVEPNKDEALAVDARQEIDLKVGVAFT 628
           EC+GF  N  R +V+RARFSSVTEKDI+ A+ NLVEPN++EALAVDARQEIDLKVGVAFT
Sbjct: 126 ECSGFGGNGTRKKVYRARFSSVTEKDILKALDNLVEPNRNEALAVDARQEIDLKVGVAFT 185

Query: 629 RFQTTYFQGKYG 664
           RFQTT+FQGKYG
Sbjct: 186 RFQTTFFQGKYG 197