BLASTX nr result

ID: Atractylodes21_contig00024207 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024207
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29756.3| unnamed protein product [Vitis vinifera]               62   5e-08
ref|XP_002265586.1| PREDICTED: ATP-dependent DNA helicase Q-like...    62   5e-08
ref|XP_002303149.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08

>emb|CBI29756.3| unnamed protein product [Vitis vinifera]
          Length = 1235

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/41 (68%), Positives = 34/41 (82%)
 Frame = -1

Query: 134 GGIDDDILQNLDVDQIVMQHYQSFCTPQSSISKLQRITPAV 12
           G  DDDIL+++DVDQIVM+HYQS CTPQ SISKL  +TP +
Sbjct: 193 GTDDDDILEDIDVDQIVMEHYQSTCTPQPSISKLPPVTPTL 233


>ref|XP_002265586.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Vitis
           vinifera]
          Length = 1224

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/41 (68%), Positives = 34/41 (82%)
 Frame = -1

Query: 134 GGIDDDILQNLDVDQIVMQHYQSFCTPQSSISKLQRITPAV 12
           G  DDDIL+++DVDQIVM+HYQS CTPQ SISKL  +TP +
Sbjct: 182 GTDDDDILEDIDVDQIVMEHYQSTCTPQPSISKLPPVTPTL 222


>ref|XP_002303149.1| predicted protein [Populus trichocarpa] gi|222840581|gb|EEE78128.1|
           predicted protein [Populus trichocarpa]
          Length = 1194

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/57 (52%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
 Frame = -1

Query: 185 NYATNASHFKGFQDTSAGGIDDD-ILQNLDVDQIVMQHYQSFCTPQSSISKLQRITP 18
           N+       K F +TSA  IDDD +++++DVDQIVM+HYQ+ CTPQ +ISK   ITP
Sbjct: 198 NHTVQTCQTKEFVETSADYIDDDDLIESIDVDQIVMEHYQATCTPQPAISKFPPITP 254


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