BLASTX nr result

ID: Atractylodes21_contig00024190 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024190
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275126.1| PREDICTED: RNA polymerase II transcriptional...   115   5e-24
ref|XP_004146395.1| PREDICTED: RNA polymerase II transcriptional...   114   8e-24
gb|AFK40203.1| unknown [Lotus japonicus]                              113   1e-23
gb|ABK22407.1| unknown [Picea sitchensis] gi|224285214|gb|ACN403...   109   2e-22
ref|NP_001241012.1| uncharacterized protein LOC100820368 [Glycin...   109   3e-22

>ref|XP_002275126.1| PREDICTED: RNA polymerase II transcriptional coactivator KIWI
           [Vitis vinifera] gi|147846591|emb|CAN79502.1|
           hypothetical protein VITISV_022689 [Vitis vinifera]
           gi|296082597|emb|CBI21602.3| unnamed protein product
           [Vitis vinifera]
          Length = 103

 Score =  115 bits (287), Expect = 5e-24
 Identities = 58/109 (53%), Positives = 72/109 (66%)
 Frame = +2

Query: 20  KWGKAKSEKEMSFKRGKGKEEDDYAXXXXXXXXXXXXXXXGDEDDIFICDVSKNRRVSVR 199
           KWGK K             + DD+A                D D+I +C++S+NRRVSVR
Sbjct: 3   KWGKRKQSY------ASDGDSDDHAPSKKSSMKDSD-----DPDNIIVCEISRNRRVSVR 51

Query: 200 SWQGKIVVDIREFYIKDGKQMPGKKGISLSMDQWKELRAHVDEIDKALA 346
           +WQGK+ VDIREFY+KDGKQMPGKKGISL+MDQW  LR HV+EID+A+A
Sbjct: 52  NWQGKVQVDIREFYVKDGKQMPGKKGISLTMDQWNVLRDHVNEIDEAVA 100


>ref|XP_004146395.1| PREDICTED: RNA polymerase II transcriptional coactivator KIWI-like
           [Cucumis sativus] gi|449527765|ref|XP_004170880.1|
           PREDICTED: RNA polymerase II transcriptional coactivator
           KIWI-like [Cucumis sativus]
          Length = 104

 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/93 (59%), Positives = 66/93 (70%)
 Frame = +2

Query: 65  GKGKEEDDYAXXXXXXXXXXXXXXXGDEDDIFICDVSKNRRVSVRSWQGKIVVDIREFYI 244
           GK K ++D                  D D+I +C++SKNRRV VR+WQGKIVVDIREFY+
Sbjct: 5   GKRKGDEDDVSEGDAPPSKTFKKDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYV 64

Query: 245 KDGKQMPGKKGISLSMDQWKELRAHVDEIDKAL 343
           KDGKQMPGKKGISLS+DQW  L  HV+EIDKA+
Sbjct: 65  KDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAV 97


>gb|AFK40203.1| unknown [Lotus japonicus]
          Length = 106

 Score =  113 bits (283), Expect = 1e-23
 Identities = 50/67 (74%), Positives = 60/67 (89%)
 Frame = +2

Query: 143 DEDDIFICDVSKNRRVSVRSWQGKIVVDIREFYIKDGKQMPGKKGISLSMDQWKELRAHV 322
           D D I +C++SKNRRVSVR+WQG+IVVDI EFY+KDGKQMPGKKGISL+MDQW  LR H+
Sbjct: 36  DPDSIVVCEISKNRRVSVRNWQGRIVVDILEFYVKDGKQMPGKKGISLTMDQWNVLRNHI 95

Query: 323 DEIDKAL 343
           +EIDKA+
Sbjct: 96  EEIDKAV 102


>gb|ABK22407.1| unknown [Picea sitchensis] gi|224285214|gb|ACN40333.1| unknown
           [Picea sitchensis]
          Length = 104

 Score =  109 bits (273), Expect = 2e-22
 Identities = 55/108 (50%), Positives = 67/108 (62%)
 Frame = +2

Query: 20  KWGKAKSEKEMSFKRGKGKEEDDYAXXXXXXXXXXXXXXXGDEDDIFICDVSKNRRVSVR 199
           KWGK K E +         ++ D                  D   I IC++SK R+VSVR
Sbjct: 3   KWGKRKEEYDRD-------DDSDGDGESPVKKKTKKKFVSDDTSTIEICEISKTRKVSVR 55

Query: 200 SWQGKIVVDIREFYIKDGKQMPGKKGISLSMDQWKELRAHVDEIDKAL 343
            WQGKI VDIREFYIKDGKQ+PGKKGISLS+DQW+ LR H+DE+DK +
Sbjct: 56  MWQGKIFVDIREFYIKDGKQLPGKKGISLSLDQWEVLRNHIDEVDKEI 103


>ref|NP_001241012.1| uncharacterized protein LOC100820368 [Glycine max]
           gi|255637253|gb|ACU18957.1| unknown [Glycine max]
          Length = 105

 Score =  109 bits (272), Expect = 3e-22
 Identities = 47/67 (70%), Positives = 60/67 (89%)
 Frame = +2

Query: 143 DEDDIFICDVSKNRRVSVRSWQGKIVVDIREFYIKDGKQMPGKKGISLSMDQWKELRAHV 322
           D D + IC++SKNRRV+VR+W+G I+VDIREFY+KDGKQ+PG+KGISL+MDQW  LR HV
Sbjct: 35  DPDSVTICEISKNRRVAVRNWKGSIMVDIREFYVKDGKQLPGRKGISLTMDQWNVLRNHV 94

Query: 323 DEIDKAL 343
           +EIDKA+
Sbjct: 95  EEIDKAV 101


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