BLASTX nr result
ID: Atractylodes21_contig00024156
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes21_contig00024156 (411 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002282453.1| PREDICTED: putative RNA-binding protein ylmH... 65 6e-09 ref|XP_002891729.1| hypothetical protein ARALYDRAFT_314636 [Arab... 59 5e-07 emb|CAN67613.1| hypothetical protein VITISV_010260 [Vitis vinifera] 55 5e-06 >ref|XP_002282453.1| PREDICTED: putative RNA-binding protein ylmH [Vitis vinifera] gi|302142996|emb|CBI20291.3| unnamed protein product [Vitis vinifera] Length = 321 Score = 65.1 bits (157), Expect = 6e-09 Identities = 37/76 (48%), Positives = 46/76 (60%) Frame = -2 Query: 230 HPFLKRAVQAIPNPSYTLLNPKFPPSLFHAPLTSSGVGLCHLAQAVKGDTEVLLKGVGEK 51 H FL + I N + N + P H L SS G+CHLAQA+KGD LLKGV ++ Sbjct: 17 HSFLPLRLTHINNTLFYYKNLRSFPLSTH--LNSSASGMCHLAQAMKGDANSLLKGVADR 74 Query: 50 GSNEEVKHIIEMAKRA 3 + E VKHI+EMAKRA Sbjct: 75 STIEAVKHILEMAKRA 90 >ref|XP_002891729.1| hypothetical protein ARALYDRAFT_314636 [Arabidopsis lyrata subsp. lyrata] gi|297337571|gb|EFH67988.1| hypothetical protein ARALYDRAFT_314636 [Arabidopsis lyrata subsp. lyrata] Length = 759 Score = 58.5 bits (140), Expect = 5e-07 Identities = 35/93 (37%), Positives = 59/93 (63%), Gaps = 8/93 (8%) Frame = -2 Query: 257 ASMSFAAVAHPF--LKRAVQAIPNPSY------TLLNPKFPPSLFHAPLTSSGVGLCHLA 102 A+M+ ++A P+ L++ +++ SY TL++ P+ F PL S + C++A Sbjct: 437 AAMAVTSLAPPWIILRQTFRSVAASSYLHSNHKTLISNLSIPASF--PLRHSALRRCYIA 494 Query: 101 QAVKGDTEVLLKGVGEKGSNEEVKHIIEMAKRA 3 +A+KGD + LLKGVG++ +EVK I+EMA+RA Sbjct: 495 EAIKGDVDFLLKGVGDQAVAKEVKQILEMARRA 527 >emb|CAN67613.1| hypothetical protein VITISV_010260 [Vitis vinifera] Length = 269 Score = 55.5 bits (132), Expect = 5e-06 Identities = 25/38 (65%), Positives = 31/38 (81%) Frame = -2 Query: 116 LCHLAQAVKGDTEVLLKGVGEKGSNEEVKHIIEMAKRA 3 +CHLAQA+KGD LLKGV ++ + E VKHI+EMAKRA Sbjct: 1 MCHLAQAMKGDANSLLKGVADRSTIEAVKHILEMAKRA 38