BLASTX nr result

ID: Atractylodes21_contig00024156 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024156
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282453.1| PREDICTED: putative RNA-binding protein ylmH...    65   6e-09
ref|XP_002891729.1| hypothetical protein ARALYDRAFT_314636 [Arab...    59   5e-07
emb|CAN67613.1| hypothetical protein VITISV_010260 [Vitis vinifera]    55   5e-06

>ref|XP_002282453.1| PREDICTED: putative RNA-binding protein ylmH [Vitis vinifera]
           gi|302142996|emb|CBI20291.3| unnamed protein product
           [Vitis vinifera]
          Length = 321

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 37/76 (48%), Positives = 46/76 (60%)
 Frame = -2

Query: 230 HPFLKRAVQAIPNPSYTLLNPKFPPSLFHAPLTSSGVGLCHLAQAVKGDTEVLLKGVGEK 51
           H FL   +  I N  +   N +  P   H  L SS  G+CHLAQA+KGD   LLKGV ++
Sbjct: 17  HSFLPLRLTHINNTLFYYKNLRSFPLSTH--LNSSASGMCHLAQAMKGDANSLLKGVADR 74

Query: 50  GSNEEVKHIIEMAKRA 3
            + E VKHI+EMAKRA
Sbjct: 75  STIEAVKHILEMAKRA 90


>ref|XP_002891729.1| hypothetical protein ARALYDRAFT_314636 [Arabidopsis lyrata subsp.
           lyrata] gi|297337571|gb|EFH67988.1| hypothetical protein
           ARALYDRAFT_314636 [Arabidopsis lyrata subsp. lyrata]
          Length = 759

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 35/93 (37%), Positives = 59/93 (63%), Gaps = 8/93 (8%)
 Frame = -2

Query: 257 ASMSFAAVAHPF--LKRAVQAIPNPSY------TLLNPKFPPSLFHAPLTSSGVGLCHLA 102
           A+M+  ++A P+  L++  +++   SY      TL++    P+ F  PL  S +  C++A
Sbjct: 437 AAMAVTSLAPPWIILRQTFRSVAASSYLHSNHKTLISNLSIPASF--PLRHSALRRCYIA 494

Query: 101 QAVKGDTEVLLKGVGEKGSNEEVKHIIEMAKRA 3
           +A+KGD + LLKGVG++   +EVK I+EMA+RA
Sbjct: 495 EAIKGDVDFLLKGVGDQAVAKEVKQILEMARRA 527


>emb|CAN67613.1| hypothetical protein VITISV_010260 [Vitis vinifera]
          Length = 269

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/38 (65%), Positives = 31/38 (81%)
 Frame = -2

Query: 116 LCHLAQAVKGDTEVLLKGVGEKGSNEEVKHIIEMAKRA 3
           +CHLAQA+KGD   LLKGV ++ + E VKHI+EMAKRA
Sbjct: 1   MCHLAQAMKGDANSLLKGVADRSTIEAVKHILEMAKRA 38


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