BLASTX nr result

ID: Atractylodes21_contig00024050 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024050
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62821.1| hypothetical protein VITISV_013041 [Vitis vinifera]    72   4e-11
emb|CAN66228.1| hypothetical protein VITISV_012977 [Vitis vinifera]    70   1e-10
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...    69   4e-10
emb|CAN81986.1| hypothetical protein VITISV_001568 [Vitis vinifera]    69   5e-10
gb|ABF94845.1| retrotransposon protein, putative, unclassified [...    66   3e-09

>emb|CAN62821.1| hypothetical protein VITISV_013041 [Vitis vinifera]
          Length = 1357

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 36/92 (39%), Positives = 54/92 (58%)
 Frame = +1

Query: 1    PTSANIHDVFHVSQLKPFHGTLPTATHIPSWFQNQSQSHHVRPAAVLDRRVVKFQNVVQV 180
            P  A IH+VFHVS LKP H ++   + +P      + S  + P A+L+RR+VK  NV  V
Sbjct: 1265 PPDAQIHNVFHVSLLKPAHASIQACSSLPI----SNTSTTLLPQAILNRRLVKRHNVPTV 1320

Query: 181  QYLVQWEGSPAHEASWEVASEFEKQFPDFNID 276
            Q L+ W      +ASWE A + +++FP F ++
Sbjct: 1321 QLLIHWVDKSPADASWEFADDLKRRFPAFFLE 1352


>emb|CAN66228.1| hypothetical protein VITISV_012977 [Vitis vinifera]
          Length = 1258

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 39/102 (38%), Positives = 55/102 (53%)
 Frame = +1

Query: 1    PTSANIHDVFHVSQLKPFHGTLPTATHIPSWFQNQSQSHHVRPAAVLDRRVVKFQNVVQV 180
            P+S  IH VFHVSQLK   G+            + S+   V P  VLD R     N   +
Sbjct: 1149 PSSETIHPVFHVSQLKWTLGSADLCQPFSLVLADDSE-WRVEPDQVLDIRQSPNNNQPDI 1207

Query: 181  QYLVQWEGSPAHEASWEVASEFEKQFPDFNIDLRTSI*KGEN 306
            + L+QW+G P  EASWE+    +K FPDF+++ + S+ +G N
Sbjct: 1208 EVLIQWKGLPQFEASWELVDTIKKHFPDFHLEDKVSLIEGGN 1249


>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
            thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
            polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 33/89 (37%), Positives = 50/89 (56%)
 Frame = +1

Query: 1    PTSANIHDVFHVSQLKPFHGTLPTATHIPSWFQNQSQSHHVRPAAVLDRRVVKFQNVVQV 180
            P+ + +H VFHVSQLK   G + T  H+PS  Q+  +     P  V++R++V  Q     
Sbjct: 1412 PSYSQVHPVFHVSQLKVLVGNVSTTVHLPSVMQDVFEKV---PEKVVERKMVNRQGKAVT 1468

Query: 181  QYLVQWEGSPAHEASWEVASEFEKQFPDF 267
            + LV+W   P  EA+WE   + +K FP+F
Sbjct: 1469 KVLVKWSNEPLEEATWEFLFDLQKTFPEF 1497


>emb|CAN81986.1| hypothetical protein VITISV_001568 [Vitis vinifera]
          Length = 672

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 35/89 (39%), Positives = 51/89 (57%)
 Frame = +1

Query: 1   PTSANIHDVFHVSQLKPFHGTLPTATHIPSWFQNQSQSHHVRPAAVLDRRVVKFQNVVQV 180
           P  A IH+VFHVS LKP H ++   + +P      + S  + P A+LDRR+VK  NV  V
Sbjct: 512 PPDAQIHNVFHVSLLKPAHASIQACSSLPI----SNTSTTLLPQAILDRRLVKXHNVPXV 567

Query: 181 QYLVQWEGSPAHEASWEVASEFEKQFPDF 267
           Q L+ W      +ASWE A + +++  +F
Sbjct: 568 QLLIHWVDKSPADASWEFADDLKRRNWEF 596


>gb|ABF94845.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 937

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 39/91 (42%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
 Frame = +1

Query: 1    PTSANIHDVFHVSQLK---PFHGTLPTATHIPSWFQNQSQSHHVRPAAVLDRRVVKFQNV 171
            P S+ +H VFHVSQLK   P H   P  T +PS  Q    +  V P A+L+RR+VK  N 
Sbjct: 825  PASSTVHPVFHVSQLKAQVPDH--TPVYTSLPS--QVVLDAADVVPEAILERRLVKRSNA 880

Query: 172  VQVQYLVQWEGSPAHEASWEVASEFEKQFPD 264
              VQ L++W   PA  A+WE     + +FPD
Sbjct: 881  AHVQVLLKWSSLPADHATWEDYHVVKTRFPD 911


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