BLASTX nr result

ID: Atractylodes21_contig00022487 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00022487
         (612 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   229   3e-58
ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|2...   227   1e-57
ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   224   7e-57
ref|XP_002532829.1| dead box ATP-dependent RNA helicase, putativ...   219   4e-55
ref|NP_193320.6| RNA helicase 1 [Arabidopsis thaliana] gi|334302...   212   4e-53

>ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1 [Vitis vinifera]
           gi|297740757|emb|CBI30939.3| unnamed protein product
           [Vitis vinifera]
          Length = 516

 Score =  229 bits (584), Expect = 3e-58
 Identities = 116/146 (79%), Positives = 126/146 (86%)
 Frame = +3

Query: 171 KGQKAIKKVAVLPWMRRPIDVSSFENCPLNQLPFLHPRLEAALCSSGIDSLFPVQVAVWQ 350
           K  K  K V VLPWMR PIDVS FE CPL+  P L PRLE AL + G  SLFPVQVAVWQ
Sbjct: 2   KEAKQKKNVPVLPWMRSPIDVSLFEECPLHLFPCLDPRLEVALKNMGFSSLFPVQVAVWQ 61

Query: 351 ETIGPGSFERDLCVNSPTGSGKTLAYALPIVQMLSTRAVKCLRALVVLPTRDLALQVRDV 530
           ET+GPG+FERDLC+NSPTGSGKTLAYALPIV +LS+RAVKCLRALVVLPTRDLALQV++V
Sbjct: 62  ETVGPGAFERDLCINSPTGSGKTLAYALPIVNVLSSRAVKCLRALVVLPTRDLALQVKEV 121

Query: 531 FATIAPAVGLSVGLAVGQSSIADEIS 608
           FA IAPAVGLSVGLAVGQ+SIADEIS
Sbjct: 122 FAAIAPAVGLSVGLAVGQTSIADEIS 147


>ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|222848405|gb|EEE85952.1|
           predicted protein [Populus trichocarpa]
          Length = 518

 Score =  227 bits (579), Expect = 1e-57
 Identities = 116/149 (77%), Positives = 128/149 (85%)
 Frame = +3

Query: 162 EEAKGQKAIKKVAVLPWMRRPIDVSSFENCPLNQLPFLHPRLEAALCSSGIDSLFPVQVA 341
           EE+   K  K V VLPWMR P+DVS FE  PL+ LP L PRL+ AL + G  +LFPVQ+A
Sbjct: 2   EESTIAKQNKNVPVLPWMRSPVDVSKFEEYPLDILPCLDPRLKMALQNMGFKTLFPVQIA 61

Query: 342 VWQETIGPGSFERDLCVNSPTGSGKTLAYALPIVQMLSTRAVKCLRALVVLPTRDLALQV 521
           VWQETIGPG+FERDLC+NSPTGSGKTLAYALPIVQ+LSTRAVKCLRALVVLPTRDLALQV
Sbjct: 62  VWQETIGPGAFERDLCINSPTGSGKTLAYALPIVQLLSTRAVKCLRALVVLPTRDLALQV 121

Query: 522 RDVFATIAPAVGLSVGLAVGQSSIADEIS 608
           + VFA IAPA+GLSVGLAVGQSSIADEIS
Sbjct: 122 KQVFAAIAPAMGLSVGLAVGQSSIADEIS 150


>ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
           sativus] gi|449490565|ref|XP_004158642.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
           sativus]
          Length = 517

 Score =  224 bits (572), Expect = 7e-57
 Identities = 112/140 (80%), Positives = 124/140 (88%)
 Frame = +3

Query: 189 KKVAVLPWMRRPIDVSSFENCPLNQLPFLHPRLEAALCSSGIDSLFPVQVAVWQETIGPG 368
           K++ VLPWMR P+DVS  E CPL  LP L  RL+AAL + GI SLFPVQ+AVWQE IGPG
Sbjct: 8   KRIPVLPWMRSPVDVSLIEECPLEILPMLDHRLKAALQNMGISSLFPVQLAVWQEAIGPG 67

Query: 369 SFERDLCVNSPTGSGKTLAYALPIVQMLSTRAVKCLRALVVLPTRDLALQVRDVFATIAP 548
           SF+RDLC+NSPTGSGKTLAYALPIVQMLS+R VKCLRALVVLPTRDLALQV++VF+ IAP
Sbjct: 68  SFDRDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKEVFSAIAP 127

Query: 549 AVGLSVGLAVGQSSIADEIS 608
           AVGLSVGLAVGQSSIADEIS
Sbjct: 128 AVGLSVGLAVGQSSIADEIS 147


>ref|XP_002532829.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223527420|gb|EEF29559.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 469

 Score =  219 bits (557), Expect = 4e-55
 Identities = 110/149 (73%), Positives = 127/149 (85%)
 Frame = +3

Query: 162 EEAKGQKAIKKVAVLPWMRRPIDVSSFENCPLNQLPFLHPRLEAALCSSGIDSLFPVQVA 341
           EE+K +K  K V VLPWMR P+D+  FE C L+ +P L PRL+ AL + G  SLF VQVA
Sbjct: 2   EESKLEK--KNVPVLPWMRCPVDIKQFEECSLDLVPCLDPRLKVALENMGFTSLFAVQVA 59

Query: 342 VWQETIGPGSFERDLCVNSPTGSGKTLAYALPIVQMLSTRAVKCLRALVVLPTRDLALQV 521
           VWQETIGPG+FERDLC+N+PTGSGKTLAYALPI+QMLSTR++KCLRAL+VLPTRDLALQV
Sbjct: 60  VWQETIGPGNFERDLCINAPTGSGKTLAYALPIIQMLSTRSIKCLRALIVLPTRDLALQV 119

Query: 522 RDVFATIAPAVGLSVGLAVGQSSIADEIS 608
           + VFA +APAVGLSVGLAVGQSSIA EIS
Sbjct: 120 KQVFAALAPAVGLSVGLAVGQSSIAGEIS 148


>ref|NP_193320.6| RNA helicase 1 [Arabidopsis thaliana]
           gi|334302879|sp|Q7FGZ2.3|RH1_ARATH RecName:
           Full=DEAD-box ATP-dependent RNA helicase 1
           gi|332658259|gb|AEE83659.1| RNA helicase 1 [Arabidopsis
           thaliana]
          Length = 522

 Score =  212 bits (540), Expect = 4e-53
 Identities = 105/137 (76%), Positives = 121/137 (88%)
 Frame = +3

Query: 198 AVLPWMRRPIDVSSFENCPLNQLPFLHPRLEAALCSSGIDSLFPVQVAVWQETIGPGSFE 377
           +V+PWMR P+DVS+ ENC L+ LP L+P+L+ AL + GI SLFPVQVAVW ETIGPG FE
Sbjct: 13  SVVPWMRAPVDVSNVENCALDTLPCLNPKLKKALENMGISSLFPVQVAVWHETIGPGGFE 72

Query: 378 RDLCVNSPTGSGKTLAYALPIVQMLSTRAVKCLRALVVLPTRDLALQVRDVFATIAPAVG 557
           RD+CVNSPTGSGKTL+YALPIVQ+L++R V+CLRALVVLPTRDLALQV+DVF  IAPAVG
Sbjct: 73  RDICVNSPTGSGKTLSYALPIVQLLASRPVRCLRALVVLPTRDLALQVKDVFDAIAPAVG 132

Query: 558 LSVGLAVGQSSIADEIS 608
           LSVG AVGQSSIA EIS
Sbjct: 133 LSVGSAVGQSSIAGEIS 149


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