BLASTX nr result

ID: Atractylodes21_contig00022461 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00022461
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17394.3| unnamed protein product [Vitis vinifera]              117   8e-25
ref|XP_002269841.1| PREDICTED: GDP-mannose 4,6 dehydratase 2 [Vi...   117   8e-25
emb|CAN64284.1| hypothetical protein VITISV_002724 [Vitis vinifera]   117   8e-25
ref|XP_002327670.1| gdp-mannose 4,6-dehydratase [Populus trichoc...   109   2e-22
ref|NP_201429.1| GDP-mannose 4,6 dehydratase 1 [Arabidopsis thal...   107   1e-21

>emb|CBI17394.3| unnamed protein product [Vitis vinifera]
          Length = 291

 Score =  117 bits (294), Expect = 8e-25
 Identities = 58/74 (78%), Positives = 62/74 (83%), Gaps = 4/74 (5%)
 Frame = +3

Query: 81  KQMASTGSQPTINGGE----DKRKVALITGITGQDGSYLTELLLEKGYEVHGLIRRSSNF 248
           K+ A +GS   INGGE     KRK+ALITGITGQDGSYLTE LL KGYEVHGLIRRSSNF
Sbjct: 5   KETAGSGSAAAINGGEALEPPKRKIALITGITGQDGSYLTEFLLNKGYEVHGLIRRSSNF 64

Query: 249 NTQRINHIYIDPHN 290
           NTQR+NHIYIDPHN
Sbjct: 65  NTQRLNHIYIDPHN 78


>ref|XP_002269841.1| PREDICTED: GDP-mannose 4,6 dehydratase 2 [Vitis vinifera]
          Length = 373

 Score =  117 bits (294), Expect = 8e-25
 Identities = 58/74 (78%), Positives = 62/74 (83%), Gaps = 4/74 (5%)
 Frame = +3

Query: 81  KQMASTGSQPTINGGE----DKRKVALITGITGQDGSYLTELLLEKGYEVHGLIRRSSNF 248
           K+ A +GS   INGGE     KRK+ALITGITGQDGSYLTE LL KGYEVHGLIRRSSNF
Sbjct: 5   KETAGSGSAAAINGGEALEPPKRKIALITGITGQDGSYLTEFLLNKGYEVHGLIRRSSNF 64

Query: 249 NTQRINHIYIDPHN 290
           NTQR+NHIYIDPHN
Sbjct: 65  NTQRLNHIYIDPHN 78


>emb|CAN64284.1| hypothetical protein VITISV_002724 [Vitis vinifera]
          Length = 373

 Score =  117 bits (294), Expect = 8e-25
 Identities = 58/74 (78%), Positives = 62/74 (83%), Gaps = 4/74 (5%)
 Frame = +3

Query: 81  KQMASTGSQPTINGGE----DKRKVALITGITGQDGSYLTELLLEKGYEVHGLIRRSSNF 248
           K+ A +GS   INGGE     KRK+ALITGITGQDGSYLTE LL KGYEVHGLIRRSSNF
Sbjct: 5   KETAGSGSAAAINGGEALEPPKRKIALITGITGQDGSYLTEFLLNKGYEVHGLIRRSSNF 64

Query: 249 NTQRINHIYIDPHN 290
           NTQR+NHIYIDPHN
Sbjct: 65  NTQRLNHIYIDPHN 78


>ref|XP_002327670.1| gdp-mannose 4,6-dehydratase [Populus trichocarpa]
           gi|118485706|gb|ABK94703.1| unknown [Populus
           trichocarpa] gi|222836755|gb|EEE75148.1| gdp-mannose
           4,6-dehydratase [Populus trichocarpa]
          Length = 368

 Score =  109 bits (273), Expect = 2e-22
 Identities = 56/73 (76%), Positives = 58/73 (79%), Gaps = 5/73 (6%)
 Frame = +3

Query: 87  MASTGSQP-----TINGGEDKRKVALITGITGQDGSYLTELLLEKGYEVHGLIRRSSNFN 251
           MAS   QP     T   GE K K+AL+TGITGQDGSYLTE LL KGYEVHGLIRRSSNFN
Sbjct: 1   MASESDQPRSASATPVNGEIKPKIALVTGITGQDGSYLTEFLLNKGYEVHGLIRRSSNFN 60

Query: 252 TQRINHIYIDPHN 290
           TQRINHIYIDPHN
Sbjct: 61  TQRINHIYIDPHN 73


>ref|NP_201429.1| GDP-mannose 4,6 dehydratase 1 [Arabidopsis thaliana]
           gi|9087168|sp|Q9SNY3.1|GMD1_ARATH RecName:
           Full=GDP-mannose 4,6 dehydratase 1; AltName:
           Full=GDP-D-mannose dehydratase 1; Short=GMD 1
           gi|6319186|gb|AAF07199.1|AF195140_1 GDP-D-mannose
           4,6-dehydratase [Arabidopsis thaliana]
           gi|10177422|dbj|BAB10707.1| GDP-D-mannose
           4,6-dehydratase; GMD1 [Arabidopsis thaliana]
           gi|116325922|gb|ABJ98562.1| At5g66280 [Arabidopsis
           thaliana] gi|332010811|gb|AED98194.1| GDP-mannose 4,6
           dehydratase 1 [Arabidopsis thaliana]
          Length = 361

 Score =  107 bits (267), Expect = 1e-21
 Identities = 50/63 (79%), Positives = 56/63 (88%), Gaps = 3/63 (4%)
 Frame = +3

Query: 111 TINGGED---KRKVALITGITGQDGSYLTELLLEKGYEVHGLIRRSSNFNTQRINHIYID 281
           ++NG  D    RK+AL+TGITGQDGSYLTE LLEKGYEVHGLIRRSSNFNTQR+NHIY+D
Sbjct: 5   SLNGDSDIVKPRKIALVTGITGQDGSYLTEFLLEKGYEVHGLIRRSSNFNTQRLNHIYVD 64

Query: 282 PHN 290
           PHN
Sbjct: 65  PHN 67


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