BLASTX nr result

ID: Atractylodes21_contig00022412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00022412
         (1809 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270788.1| PREDICTED: pentatricopeptide repeat-containi...   529   e-148
ref|XP_002524769.1| pentatricopeptide repeat-containing protein,...   499   e-138
ref|XP_004147968.1| PREDICTED: pentatricopeptide repeat-containi...   444   e-122
ref|XP_003520548.1| PREDICTED: pentatricopeptide repeat-containi...   429   e-118
ref|XP_002322993.1| predicted protein [Populus trichocarpa] gi|2...   424   e-116

>ref|XP_002270788.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30780
            [Vitis vinifera] gi|296086664|emb|CBI32299.3| unnamed
            protein product [Vitis vinifera]
          Length = 494

 Score =  529 bits (1363), Expect = e-148
 Identities = 248/407 (60%), Positives = 331/407 (81%)
 Frame = +2

Query: 23   KLLEVEGWNLFKMYSNGAALVELLRVLESSPHLAIKVFNWRRRREDNTRPMSSEEYAKGI 202
            ++LE +G +LF+ YSNG+A VELL+ L S P+LA++VFNWRR + D + PM+SEEYAKGI
Sbjct: 85   RVLEEKGESLFRSYSNGSAFVELLKQLSSWPYLALQVFNWRRNQTDYSIPMTSEEYAKGI 144

Query: 203  KIAGRMKNIDLAIELFTEAATKQVKNASTYNALMSAYMYNGFTEKCQSVYHNLKKDDTCR 382
             +AGR KN+DLA+ELFTEAA KQ+K  STYNALM AYM NG  EKCQ+++ +LK++ +C 
Sbjct: 145  SVAGRTKNVDLAVELFTEAANKQIKTTSTYNALMGAYMCNGHAEKCQALFRDLKREASCS 204

Query: 383  PTSATFNLLISLFGHRVLTDQMEAMFQEMKDSKISPDLTTYNYMIAGYLTAWMWDSMENT 562
            PT  T+N+LIS+FG  +L D MEA F+E+K+ ++SP+++TYN +IAGY+TAWMW+ ME+T
Sbjct: 205  PTIVTYNILISVFGRLMLVDHMEATFREIKELELSPNISTYNNIIAGYVTAWMWNRMEDT 264

Query: 563  YRMMETGSVRPNLDTRLLMLRGYAHSGNLEKMEEIYNMVGPHILEQRLPLIRAMICAYCK 742
            +R M+  +++P+++T LLMLRGYAHSGNL+KMEE Y ++  H+ ++ +PLIRAMICAYCK
Sbjct: 265  FRTMKEDNIQPDINTHLLMLRGYAHSGNLQKMEETYELIKGHVNDKEIPLIRAMICAYCK 324

Query: 743  SSYTNRVKRIEELMRLIPENEYRPWLNVLLIRVYAEEDLVDQMDRSIDEAFEHNTSVNTV 922
            SS T+RV++I  LM+LIPENEYRPWLNV+LIRVYA+ED V++M+ SI+EAFEH TSV T+
Sbjct: 325  SSITDRVEKIGALMKLIPENEYRPWLNVMLIRVYAQEDWVEEMENSINEAFEHKTSVKTM 384

Query: 923  RIMRTIVATYIRSNAVDRLAKFIKRAADSGWRMSRPVYHGLLRMFASHKRIEEMEQVLVE 1102
            R+MR+I+ATY R NAVDRLA F+KRA   GW + R +YH  + M+AS KR+EEME VL E
Sbjct: 385  RVMRSIIATYFRCNAVDRLANFVKRAECGGWHICRSLYHCKMVMYASQKRLEEMESVLNE 444

Query: 1103 MERFNYGCSKRTFVILYEAYSKQEEGYRHKFHRVLGLMCKHGYGVPS 1243
            ME  N+ C+K+TF ILY+AYS  ++  RHK  +V GLMCKHGYG+PS
Sbjct: 445  MESSNFCCTKKTFWILYKAYSMWDQ--RHKVEQVKGLMCKHGYGIPS 489


>ref|XP_002524769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223535953|gb|EEF37612.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 509

 Score =  499 bits (1284), Expect = e-138
 Identities = 242/413 (58%), Positives = 320/413 (77%)
 Frame = +2

Query: 2    KDEYSFEKLLEVEGWNLFKMYSNGAALVELLRVLESSPHLAIKVFNWRRRREDNTRPMSS 181
            +D   F ++LE +G +LF+M S+ +ALVELLR L S PHLA++VFNWRR++ + + PM+ 
Sbjct: 93   EDSDKFFRVLEEQGDSLFRMRSDRSALVELLRQLVSLPHLAVEVFNWRRKQTEWSTPMTH 152

Query: 182  EEYAKGIKIAGRMKNIDLAIELFTEAATKQVKNASTYNALMSAYMYNGFTEKCQSVYHNL 361
            EEYAKGI IAGR KN+DLAIE+F EA +K+ K    YNALM AYMYNG  +KCQS++ + 
Sbjct: 153  EEYAKGITIAGRAKNVDLAIEIFAEACSKRRKKTCIYNALMGAYMYNGHYDKCQSLFLDF 212

Query: 362  KKDDTCRPTSATFNLLISLFGHRVLTDQMEAMFQEMKDSKISPDLTTYNYMIAGYLTAWM 541
            KK+    P+  T+N+LIS+FG  +L D MEA F+E+ +  ISP+++TYN +IAGY+TAWM
Sbjct: 213  KKEANIGPSVVTYNILISVFGRSMLVDHMEATFRELMNLNISPNVSTYNNLIAGYVTAWM 272

Query: 542  WDSMENTYRMMETGSVRPNLDTRLLMLRGYAHSGNLEKMEEIYNMVGPHILEQRLPLIRA 721
            WD ME  +++M+ G + P+LDT LLMLRGYAHSGN+EKMEE+Y +V  H+    +PLIR 
Sbjct: 273  WDDMEQVFQLMKEGPIYPHLDTYLLMLRGYAHSGNIEKMEEMYKLVQDHVNVNEVPLIRT 332

Query: 722  MICAYCKSSYTNRVKRIEELMRLIPENEYRPWLNVLLIRVYAEEDLVDQMDRSIDEAFEH 901
            MICAYCKSS T+R+K+IEEL+RLIPE EYRPWLNVLLI+VYA+++L++ M+  IDEAF+H
Sbjct: 333  MICAYCKSSITDRIKKIEELLRLIPEEEYRPWLNVLLIKVYAQQNLLEAMENKIDEAFKH 392

Query: 902  NTSVNTVRIMRTIVATYIRSNAVDRLAKFIKRAADSGWRMSRPVYHGLLRMFASHKRIEE 1081
             T++ TV IMRTI+A+Y R NAVDRLA F+KRA  SGWR+ R +YH  + M+AS KR++E
Sbjct: 393  ETTITTVGIMRTIIASYFRCNAVDRLADFVKRAECSGWRICRSLYHCKMVMYASEKRLDE 452

Query: 1082 MEQVLVEMERFNYGCSKRTFVILYEAYSKQEEGYRHKFHRVLGLMCKHGYGVP 1240
            ME VL +ME FN G +K+TFVILY+AY     G ++K  +VLGLM KHGY VP
Sbjct: 453  MESVLNDMENFNLGRTKKTFVILYKAYLMC--GKKYKVEQVLGLMYKHGYEVP 503


>ref|XP_004147968.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30780-like
            [Cucumis sativus] gi|449494249|ref|XP_004159492.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At2g30780-like [Cucumis sativus]
          Length = 514

 Score =  444 bits (1143), Expect = e-122
 Identities = 222/413 (53%), Positives = 299/413 (72%)
 Frame = +2

Query: 2    KDEYSFEKLLEVEGWNLFKMYSNGAALVELLRVLESSPHLAIKVFNWRRRREDNTRPMSS 181
            +D     K+LE     L   +++G+A VELL+ L S P+LA++VFNWRRR +  + P++ 
Sbjct: 97   EDSNKIVKILEDSKDLLLWKHTDGSAFVELLKQLGSQPNLALEVFNWRRR-QGGSFPLTV 155

Query: 182  EEYAKGIKIAGRMKNIDLAIELFTEAATKQVKNASTYNALMSAYMYNGFTEKCQSVYHNL 361
            EEYAKGI +AG+ K+IDLA+ LF EA+ K+VK  STYNALM  +M+NG  +KC SV+ +L
Sbjct: 156  EEYAKGIAVAGKSKHIDLAVGLFNEASNKRVKATSTYNALMGVFMFNGLADKCNSVFRDL 215

Query: 362  KKDDTCRPTSATFNLLISLFGHRVLTDQMEAMFQEMKDSKISPDLTTYNYMIAGYLTAWM 541
            K+D  C P   T+N+LIS+FG  +L D MEA  +E+ +  +SP++ TYN +IAGY+TAWM
Sbjct: 216  KRDAGCVPNIVTYNILISVFGRLMLVDHMEATMREIHNLNLSPNVNTYNSLIAGYITAWM 275

Query: 542  WDSMENTYRMMETGSVRPNLDTRLLMLRGYAHSGNLEKMEEIYNMVGPHILEQRLPLIRA 721
            W  ME  +  M+  S+ PN +T LLMLRGYAHS NLEKMEE+++ +  H+ +   PLIRA
Sbjct: 276  WKRMEQAFMKMKASSITPNTETFLLMLRGYAHSDNLEKMEEMHHFLKDHVNKNNFPLIRA 335

Query: 722  MICAYCKSSYTNRVKRIEELMRLIPENEYRPWLNVLLIRVYAEEDLVDQMDRSIDEAFEH 901
            MI AY +SS T++V +I+ L++LIPE EYRPWLNV LIRVYA+ D +++M+ SI+EAFEH
Sbjct: 336  MIYAYSRSSITDKVHKIDALLKLIPEEEYRPWLNVKLIRVYAQADCLERMENSINEAFEH 395

Query: 902  NTSVNTVRIMRTIVATYIRSNAVDRLAKFIKRAADSGWRMSRPVYHGLLRMFASHKRIEE 1081
             TSV TV +MR+I+A+Y R NAVD+L  FI RA  SGWR+ R +YH  + MFAS  R+EE
Sbjct: 396  GTSVYTVHVMRSIIASYFRCNAVDKLINFISRAESSGWRICRSLYHCKMVMFASQNRLEE 455

Query: 1082 MEQVLVEMERFNYGCSKRTFVILYEAYSKQEEGYRHKFHRVLGLMCKHGYGVP 1240
            ME VL EM+ FN   SK+TF ILY+AYS    G R+K ++V+  MCK GYGVP
Sbjct: 456  MECVLDEMKNFNLDWSKKTFYILYKAYS--TSGCRYKANQVVCRMCKLGYGVP 506


>ref|XP_003520548.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30780-like
            [Glycine max]
          Length = 442

 Score =  429 bits (1104), Expect = e-118
 Identities = 205/412 (49%), Positives = 292/412 (70%)
 Frame = +2

Query: 5    DEYSFEKLLEVEGWNLFKMYSNGAALVELLRVLESSPHLAIKVFNWRRRREDNTRPMSSE 184
            D    + +L+     LF+ + NG+AL++L+  L S+P LA++VF+WRR+R +   PM + 
Sbjct: 28   DSARVQTILDDSFDTLFRRHPNGSALLKLMNQLNSNPSLALQVFSWRRKRSNAENPMDAY 87

Query: 185  EYAKGIKIAGRMKNIDLAIELFTEAATKQVKNASTYNALMSAYMYNGFTEKCQSVYHNLK 364
            EY+KGIK AGR  N+DLA++LF EAA K +K   TYNALM A+M+NG  + CQS++ +LK
Sbjct: 88   EYSKGIKAAGRSGNVDLAVKLFKEAAVKGIKTTGTYNALMGAFMFNGLPDNCQSLFCDLK 147

Query: 365  KDDTCRPTSATFNLLISLFGHRVLTDQMEAMFQEMKDSKISPDLTTYNYMIAGYLTAWMW 544
            +D TC P+ AT+N+L+S++G  +L D MEA F E++   ++ ++ TYN++IAGY+TAWMW
Sbjct: 148  RDLTCDPSIATYNILLSVYGRLMLVDHMEATFSEIQRLNLAMNICTYNHLIAGYITAWMW 207

Query: 545  DSMENTYRMMETGSVRPNLDTRLLMLRGYAHSGNLEKMEEIYNMVGPHILEQRLPLIRAM 724
            D ME  ++M++  SV PN+ T LLMLRGYA+SGNLEKMEE+Y+ +  H+  + + LIR M
Sbjct: 208  DDMEKVFQMLKLSSVEPNMKTHLLMLRGYANSGNLEKMEEMYSFIRDHVNIKEISLIRCM 267

Query: 725  ICAYCKSSYTNRVKRIEELMRLIPENEYRPWLNVLLIRVYAEEDLVDQMDRSIDEAFEHN 904
            ICAYC+SS+ +R+K+IE L++ IP+ EYRPWLNVLLI++YA+ED + +M+ +I+EAFEH 
Sbjct: 268  ICAYCRSSHADRLKKIELLLKFIPQKEYRPWLNVLLIKLYAKEDWLAKMENAINEAFEHG 327

Query: 905  TSVNTVRIMRTIVATYIRSNAVDRLAKFIKRAADSGWRMSRPVYHGLLRMFASHKRIEEM 1084
            TS+ T  I+R I+ATY R NAV++L  F++RA  SGW + R +YH  L M+ S   + EM
Sbjct: 328  TSITTKGILRRIIATYYRCNAVEKLENFVRRAEISGWSICRSLYHCKLVMYGSQMTLLEM 387

Query: 1085 EQVLVEMERFNYGCSKRTFVILYEAYSKQEEGYRHKFHRVLGLMCKHGYGVP 1240
              VL EME     CSK+T  I+Y+AY     G      + LG M KHGY VP
Sbjct: 388  HNVLEEMENVKLKCSKKTLWIMYKAY--MSRGQISMVLKTLGQMFKHGYEVP 437


>ref|XP_002322993.1| predicted protein [Populus trichocarpa] gi|222867623|gb|EEF04754.1|
            predicted protein [Populus trichocarpa]
          Length = 360

 Score =  424 bits (1091), Expect = e-116
 Identities = 203/356 (57%), Positives = 272/356 (76%)
 Frame = +2

Query: 173  MSSEEYAKGIKIAGRMKNIDLAIELFTEAATKQVKNASTYNALMSAYMYNGFTEKCQSVY 352
            M++ EYAKGI IAG  KN+DLA+E+F EA  K +K  S YNALM+A M NG   KC+S++
Sbjct: 1    MTAAEYAKGIMIAGTDKNVDLAVEIFDEAIKKCIKTTSMYNALMTACMCNGLAGKCESLF 60

Query: 353  HNLKKDDTCRPTSATFNLLISLFGHRVLTDQMEAMFQEMKDSKISPDLTTYNYMIAGYLT 532
              +K+D  CRP+  T+N+L+S+FG  +L D+MEA+F+EM+DS+ISP+LTTYN +I+GY+T
Sbjct: 61   REMKRDVKCRPSVVTYNILVSVFGRLMLVDKMEAIFKEMEDSRISPNLTTYNNLISGYVT 120

Query: 533  AWMWDSMENTYRMMETGSVRPNLDTRLLMLRGYAHSGNLEKMEEIYNMVGPHILEQRLPL 712
             WMWDSME T++MM  G V+P+L+T LLMLRGYAHSG+LE+ME +Y ++  H+  +RL L
Sbjct: 121  VWMWDSMEKTFQMMIAGPVKPDLNTHLLMLRGYAHSGHLEQMELVYELIKDHVNARRLTL 180

Query: 713  IRAMICAYCKSSYTNRVKRIEELMRLIPENEYRPWLNVLLIRVYAEEDLVDQMDRSIDEA 892
            IRAMICAYCKSS   RV++IE LMRLIPE EYRPWLNVLLI++YAEED ++ M+ SI+EA
Sbjct: 181  IRAMICAYCKSSIPERVQKIEALMRLIPEKEYRPWLNVLLIKLYAEEDRLEGMENSINEA 240

Query: 893  FEHNTSVNTVRIMRTIVATYIRSNAVDRLAKFIKRAADSGWRMSRPVYHGLLRMFASHKR 1072
            F H  +++TV IM+ I+ +Y R NAVD+L  FIKRA  + WR+ RP++H  + M+ + KR
Sbjct: 241  FNHRITISTVSIMQAIITSYFRCNAVDKLTDFIKRATYARWRIIRPLFHCKMVMYGTQKR 300

Query: 1073 IEEMEQVLVEMERFNYGCSKRTFVILYEAYSKQEEGYRHKFHRVLGLMCKHGYGVP 1240
            ++EME VL+EME  N   +K+TF ILY+AY    + Y  K  +V GLMCKHGYG P
Sbjct: 301  LDEMESVLIEMENCNLPRTKKTFWILYKAYLNCGQWY--KVEQVAGLMCKHGYGNP 354


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