BLASTX nr result

ID: Atractylodes21_contig00022278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00022278
         (1421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69960.1| hypothetical protein VITISV_032887 [Vitis vinifera]   561   e-157
ref|XP_002306437.1| predicted protein [Populus trichocarpa] gi|2...   531   e-148
ref|XP_002521681.1| pentatricopeptide repeat-containing protein,...   529   e-148
ref|XP_003626687.1| Pentatricopeptide repeat-containing protein ...   524   e-146
ref|XP_004135005.1| PREDICTED: pentatricopeptide repeat-containi...   514   e-143

>emb|CAN69960.1| hypothetical protein VITISV_032887 [Vitis vinifera]
          Length = 472

 Score =  561 bits (1447), Expect = e-157
 Identities = 278/409 (67%), Positives = 335/409 (81%), Gaps = 1/409 (0%)
 Frame = -3

Query: 1245 IAFTSPDISAAKTLFNSLATTTKYSSLPHN-RFCNAVLQSFSSVSSNIQDSIVLLNHMTK 1069
            + F SP++  AK LF S+ TT   S+ P + RF NA+LQS+SS+S+ + DSI  L HM K
Sbjct: 67   VIFNSPNLLDAKKLFASITTT---STTPLDLRFHNALLQSYSSIST-VNDSISFLRHMIK 122

Query: 1068 THPSFSPDKFSYHILLCQSCKKPDSDLSNVNQTLNLMASKGFEPDKVTTDIAIRTLCSTG 889
            + PSFSP++ +YHILL QSCK P+SDLS V+QTLNLM + GF PD+VTTDIA+R+LCS G
Sbjct: 123  SQPSFSPERSTYHILLSQSCKSPNSDLSAVHQTLNLMVTHGFPPDRVTTDIAVRSLCSAG 182

Query: 888  HEEHAIELIKKLSQVQFTKPDTYTYNFMVKRLVKTRTLSSVSLFIKDMKEGFDVKPDLVT 709
             EEHAIEL+K+LS ++ + PD++TYNF+++ L KTR LS+V  FI +++  F +KPDLVT
Sbjct: 183  REEHAIELVKELS-LKHSPPDSFTYNFIIRHLCKTRALSTVYNFIDELQNSFQLKPDLVT 241

Query: 708  YTILIDNVCNGKNLREAMRLLDVLRDEGFKPDCYLYNTIMKGYCMLSHGGEVLRVYKKMI 529
            YTILIDNVCNGKNLREA RLL+VL + GFKPDCY+YNTIMKGYC+L  G E + VYKKM 
Sbjct: 242  YTILIDNVCNGKNLREATRLLEVLGEAGFKPDCYVYNTIMKGYCILDKGSEAIGVYKKMK 301

Query: 528  EEEIEPDLVTYNTLIYGLSKSGKVKEAMKFLNEMAKMGHFPDVVTYTSLMNGLCREGNAV 349
            EE +EPDLVTYNTLI+GLSKSG+VKEA KFL+ MA+MGHFPD VTYTSLMNGLCREGNA+
Sbjct: 302  EEGVEPDLVTYNTLIFGLSKSGRVKEARKFLDIMAEMGHFPDAVTYTSLMNGLCREGNAL 361

Query: 348  GALELLGEMENKGCNPNECTYNTLLHGLCKARQLDKGVELYGVMKENDMKLESGSYGTFL 169
            GAL LL EME KGC+PN CTYNTLLHGLCK R L++G+ELYGVMK   MKLE  SY TF+
Sbjct: 362  GALALLEEMEAKGCSPNSCTYNTLLHGLCKLRMLERGIELYGVMKSGGMKLEKASYATFV 421

Query: 168  RALCRNNRVAEAYEVFDYAVESKSLTDVAAYSTLESTLKWLKKAKEQGL 22
            RALC+  RVAEAYE FDY VESKS  DV AYSTLE++LKWL+KA+EQGL
Sbjct: 422  RALCKEGRVAEAYEAFDYVVESKSFDDVTAYSTLENSLKWLRKAREQGL 470


>ref|XP_002306437.1| predicted protein [Populus trichocarpa] gi|222855886|gb|EEE93433.1|
            predicted protein [Populus trichocarpa]
          Length = 462

 Score =  531 bits (1369), Expect = e-148
 Identities = 262/406 (64%), Positives = 325/406 (80%)
 Frame = -3

Query: 1239 FTSPDISAAKTLFNSLATTTKYSSLPHNRFCNAVLQSFSSVSSNIQDSIVLLNHMTKTHP 1060
            F +  ++ AK+LFNS  +TTK   L + R  N+ LQS++S+S+ + DSI LL+HM KT P
Sbjct: 57   FKTSSLNEAKSLFNSFISTTKAPLLDNLRLHNSFLQSYTSIST-LDDSISLLDHMVKTLP 115

Query: 1059 SFSPDKFSYHILLCQSCKKPDSDLSNVNQTLNLMASKGFEPDKVTTDIAIRTLCSTGHEE 880
            S SPD+ +YH+LL QSC++PDS LS+  + LNLM +KGF+P++ T D+AIR+LCS G  +
Sbjct: 116  SLSPDRSTYHVLLSQSCREPDSSLSSAQKVLNLMINKGFKPNQFTVDVAIRSLCSAGRVD 175

Query: 879  HAIELIKKLSQVQFTKPDTYTYNFMVKRLVKTRTLSSVSLFIKDMKEGFDVKPDLVTYTI 700
             AI L+K+ S  + +KPDT+TYNF+VK L K+R  +SV  FI +MK  FD+KPDLVTYTI
Sbjct: 176  DAILLVKEFSS-KHSKPDTFTYNFLVKCLCKSRIFNSVYSFIDEMKSSFDIKPDLVTYTI 234

Query: 699  LIDNVCNGKNLREAMRLLDVLRDEGFKPDCYLYNTIMKGYCMLSHGGEVLRVYKKMIEEE 520
            LIDNVCN KN+REA RL+ VL++ G KPD +LYNTIMKGYC+L+ G E +R+YK+M EE 
Sbjct: 235  LIDNVCNAKNIREADRLVAVLKECGLKPDAFLYNTIMKGYCLLNKGIEAVRIYKQMKEEG 294

Query: 519  IEPDLVTYNTLIYGLSKSGKVKEAMKFLNEMAKMGHFPDVVTYTSLMNGLCREGNAVGAL 340
            +EPDLVTYNTLI+GLSK G+V EA K L  M + GHFPD VTYTSLMNG+CREG+ +GA 
Sbjct: 295  VEPDLVTYNTLIFGLSKCGRVSEAKKLLKIMVESGHFPDAVTYTSLMNGMCREGDVLGAA 354

Query: 339  ELLGEMENKGCNPNECTYNTLLHGLCKARQLDKGVELYGVMKENDMKLESGSYGTFLRAL 160
             LL EME KGC+PN CTYNTLLHG CK R+L+KGVELYGV+K+  MKLE+ SY TF+RAL
Sbjct: 355  ALLEEMELKGCSPNSCTYNTLLHGFCKGRRLNKGVELYGVIKKGGMKLETASYATFVRAL 414

Query: 159  CRNNRVAEAYEVFDYAVESKSLTDVAAYSTLESTLKWLKKAKEQGL 22
            CR  RVAEAYEVFDYAVESKSLTDVAAY+TLESTLKWLKKA+EQGL
Sbjct: 415  CREGRVAEAYEVFDYAVESKSLTDVAAYTTLESTLKWLKKAREQGL 460



 Score = 77.0 bits (188), Expect = 1e-11
 Identities = 72/294 (24%), Positives = 124/294 (42%), Gaps = 12/294 (4%)
 Frame = -3

Query: 861 KKLSQVQFTKPDTYTYNFMVKRLVKTRTLSSV----SLFIKDMKEGFDVKPDLVTYTILI 694
           KKL++    KP         K L KT +L+      + FI   K    +  +L  +   +
Sbjct: 34  KKLTKKNSPKPHETETPPPHKSLFKTSSLNEAKSLFNSFISTTKA--PLLDNLRLHNSFL 91

Query: 693 DNVCNGKNLREAMRLLD--VLRDEGFKPDCYLYNTIMKGYCM-----LSHGGEVLRVYKK 535
            +  +   L +++ LLD  V       PD   Y+ ++   C      LS   +VL +   
Sbjct: 92  QSYTSISTLDDSISLLDHMVKTLPSLSPDRSTYHVLLSQSCREPDSSLSSAQKVLNL--- 148

Query: 534 MIEEEIEPDLVTYNTLIYGLSKSGKVKEAMKFLNEMAKMGHFPDVVTYTSLMNGLCREGN 355
           MI +  +P+  T +  I  L  +G+V +A+  + E +     PD  TY  L+  LC+   
Sbjct: 149 MINKGFKPNQFTVDVAIRSLCSAGRVDDAILLVKEFSSKHSKPDTFTYNFLVKCLCKSRI 208

Query: 354 AVGALELLGEMENK-GCNPNECTYNTLLHGLCKARQLDKGVELYGVMKENDMKLESGSYG 178
                  + EM++     P+  TY  L+  +C A+ + +   L  V+KE  +K ++  Y 
Sbjct: 209 FNSVYSFIDEMKSSFDIKPDLVTYTILIDNVCNAKNIREADRLVAVLKECGLKPDAFLYN 268

Query: 177 TFLRALCRNNRVAEAYEVFDYAVESKSLTDVAAYSTLESTLKWLKKAKEQGLLL 16
           T ++  C  N+  EA  ++    E     D+  Y+TL   L    +  E   LL
Sbjct: 269 TIMKGYCLLNKGIEAVRIYKQMKEEGVEPDLVTYNTLIFGLSKCGRVSEAKKLL 322


>ref|XP_002521681.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223539072|gb|EEF40668.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 458

 Score =  529 bits (1362), Expect = e-148
 Identities = 264/407 (64%), Positives = 330/407 (81%), Gaps = 1/407 (0%)
 Frame = -3

Query: 1239 FTSPDISAAKTLFNSLATTTKYSSLPHN-RFCNAVLQSFSSVSSNIQDSIVLLNHMTKTH 1063
            F SP+++ AK +FNSL +TT+   +P + RF ++ LQS+SS+S+ I DSI LL HM KT 
Sbjct: 55   FKSPELNEAKEIFNSLISTTR---VPLDLRFHHSFLQSYSSIST-IDDSISLLRHMIKTL 110

Query: 1062 PSFSPDKFSYHILLCQSCKKPDSDLSNVNQTLNLMASKGFEPDKVTTDIAIRTLCSTGHE 883
            PSF+P   +YHILL QSCK PD  LS V+Q LNLM + GF P +VT DIA+R LCS G E
Sbjct: 111  PSFTPTISTYHILLSQSCKAPDPTLSPVHQILNLMVNNGFMPTQVTVDIAVRALCSAGKE 170

Query: 882  EHAIELIKKLSQVQFTKPDTYTYNFMVKRLVKTRTLSSVSLFIKDMKEGFDVKPDLVTYT 703
            + A++L+K+LS ++ +KPD++TYNF+VK L K R LS+V  FI +M+  FD++P+LVTYT
Sbjct: 171  DDAVKLVKELS-LKHSKPDSFTYNFLVKCLCKCRALSNVYSFIDEMRSSFDLEPNLVTYT 229

Query: 702  ILIDNVCNGKNLREAMRLLDVLRDEGFKPDCYLYNTIMKGYCMLSHGGEVLRVYKKMIEE 523
            ILIDNVCN KNLREAMRLL +LR+ GFKPDC++YNTIMKGYCMLS G + ++V+KKM EE
Sbjct: 230  ILIDNVCNSKNLREAMRLLGILRECGFKPDCFVYNTIMKGYCMLSKGSDAIQVFKKMKEE 289

Query: 522  EIEPDLVTYNTLIYGLSKSGKVKEAMKFLNEMAKMGHFPDVVTYTSLMNGLCREGNAVGA 343
             IEPDL+TYNTLI+GLSK G+V EA ++L  M + GHFPD VTYTSLMNGLCR+G+A+GA
Sbjct: 290  GIEPDLITYNTLIFGLSKGGRVSEAKRYLKIMVESGHFPDAVTYTSLMNGLCRKGDALGA 349

Query: 342  LELLGEMENKGCNPNECTYNTLLHGLCKARQLDKGVELYGVMKENDMKLESGSYGTFLRA 163
            L LL +ME KGC+PN CTYNTLL+GLCK R L+KG+ELY V+KE  M L++ SY TF+RA
Sbjct: 350  LALLEDMEMKGCSPNSCTYNTLLYGLCKERLLEKGIELYNVIKEGGMLLDTASYATFVRA 409

Query: 162  LCRNNRVAEAYEVFDYAVESKSLTDVAAYSTLESTLKWLKKAKEQGL 22
            LCR  +VAEAYEVFDYAVESKSLT+ AAY+TLESTLKWLKKA+EQGL
Sbjct: 410  LCREGKVAEAYEVFDYAVESKSLTNAAAYTTLESTLKWLKKAREQGL 456


>ref|XP_003626687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355520709|gb|AET01163.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 501

 Score =  524 bits (1350), Expect = e-146
 Identities = 263/411 (63%), Positives = 319/411 (77%), Gaps = 4/411 (0%)
 Frame = -3

Query: 1239 FTSPDISAAKTLFNSLATTTKYSSLP-HNRFCNAVLQSFSSVSSNIQDSIVLLNHMTKTH 1063
            F SP++  AK++FNS   +   S+ P  +RF N++LQS++S+S+ I DSI  L HMTKTH
Sbjct: 61   FKSPNLQEAKSIFNSFVNS---SNAPIDSRFHNSLLQSYASIST-INDSIAFLRHMTKTH 116

Query: 1062 PSFSPDKFSYHILLCQSCKKPDSD---LSNVNQTLNLMASKGFEPDKVTTDIAIRTLCST 892
            PSFSPDK +YHILL   CK  DS    LS ++QTLNLM S G  PDK T D+A+R+LC+ 
Sbjct: 117  PSFSPDKSTYHILLTHCCKSTDSKYSTLSLIHQTLNLMVSDGISPDKGTVDLAVRSLCTA 176

Query: 891  GHEEHAIELIKKLSQVQFTKPDTYTYNFMVKRLVKTRTLSSVSLFIKDMKEGFDVKPDLV 712
               + A+ELIK+LS  +   PD Y+YNF+VK L K+RTLS V  FI +M+  FDVKP+LV
Sbjct: 177  DRVDDAVELIKELSS-KHCSPDIYSYNFLVKNLCKSRTLSLVYAFIDEMRTKFDVKPNLV 235

Query: 711  TYTILIDNVCNGKNLREAMRLLDVLRDEGFKPDCYLYNTIMKGYCMLSHGGEVLRVYKKM 532
            TYTILIDNVCN KNLREA RL+D+L +EGFKPDC+LYNTIMKGYCMLS G E + VY +M
Sbjct: 236  TYTILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRM 295

Query: 531  IEEEIEPDLVTYNTLIYGLSKSGKVKEAMKFLNEMAKMGHFPDVVTYTSLMNGLCREGNA 352
             E+ +EPDL+TYNTLI+GLSKSG+V EA K L  MA+ GHFPD VTYTSLMNG+CR+G  
Sbjct: 296  KEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKGET 355

Query: 351  VGALELLGEMENKGCNPNECTYNTLLHGLCKARQLDKGVELYGVMKENDMKLESGSYGTF 172
            + AL LL EME KGC+PN CTYNTLLHGLCK+R  DK +ELYG MK + +KL+  SY TF
Sbjct: 356  LAALALLEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLKLDMASYATF 415

Query: 171  LRALCRNNRVAEAYEVFDYAVESKSLTDVAAYSTLESTLKWLKKAKEQGLL 19
            +RALC   RVA+AYEVFDYAVESKSL+DVAAYSTLESTLKW KKAKE+G +
Sbjct: 416  VRALCSVGRVADAYEVFDYAVESKSLSDVAAYSTLESTLKWFKKAKEEGAI 466


>ref|XP_004135005.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17670-like
            [Cucumis sativus]
          Length = 464

 Score =  514 bits (1323), Expect = e-143
 Identities = 258/405 (63%), Positives = 319/405 (78%), Gaps = 1/405 (0%)
 Frame = -3

Query: 1239 FTSPDISAAKTLFNSLATTTKYSSLPHN-RFCNAVLQSFSSVSSNIQDSIVLLNHMTKTH 1063
            F S  ++ AK L++S  + TK    P N R  N++LQS++S+++ + DSI  L HM+K  
Sbjct: 61   FKSASLADAKKLYSSFVSATK---APFNLRVHNSLLQSYASIAT-LNDSISFLRHMSKVQ 116

Query: 1062 PSFSPDKFSYHILLCQSCKKPDSDLSNVNQTLNLMASKGFEPDKVTTDIAIRTLCSTGHE 883
            PSFSPD+ ++HILL  S  +PDS L++V Q LN M + GF PDKVT D+A+R+LCS G  
Sbjct: 117  PSFSPDQSTFHILLSTSGNRPDSTLASVQQILNFMVTNGFNPDKVTADLAVRSLCSVGLV 176

Query: 882  EHAIELIKKLSQVQFTKPDTYTYNFMVKRLVKTRTLSSVSLFIKDMKEGFDVKPDLVTYT 703
            + A+EL+K+LSQ + T PD YTYN +VK+L K+R LS+V  FI +M+     KPDLVTYT
Sbjct: 177  DEAVELVKELSQ-KHTPPDIYTYNHLVKQLCKSRALSTVYNFIVEMRSSCGAKPDLVTYT 235

Query: 702  ILIDNVCNGKNLREAMRLLDVLRDEGFKPDCYLYNTIMKGYCMLSHGGEVLRVYKKMIEE 523
            ILIDNVCN  NLREAMRL+ +L  EGFKPDC++YNTIMKGYCM+  G E + VYKKM E 
Sbjct: 236  ILIDNVCNSNNLREAMRLVSLLYKEGFKPDCFVYNTIMKGYCMVGRGAEAIGVYKKMKEV 295

Query: 522  EIEPDLVTYNTLIYGLSKSGKVKEAMKFLNEMAKMGHFPDVVTYTSLMNGLCREGNAVGA 343
             +EPD+VT+NTLI+GLSKSG+VKEA  FL+ MA+MGHFPD VTYTSLMNG+CREGNA+GA
Sbjct: 296  GLEPDVVTFNTLIFGLSKSGRVKEARNFLDIMAEMGHFPDAVTYTSLMNGMCREGNALGA 355

Query: 342  LELLGEMENKGCNPNECTYNTLLHGLCKARQLDKGVELYGVMKENDMKLESGSYGTFLRA 163
            L LL EME KGCNPN CTYNTLLHGL K+R LD+G+ELYG+MK  DMKLE+ SY TF+RA
Sbjct: 356  LSLLKEMEAKGCNPNSCTYNTLLHGLSKSRLLDRGIELYGLMKSCDMKLETASYSTFVRA 415

Query: 162  LCRNNRVAEAYEVFDYAVESKSLTDVAAYSTLESTLKWLKKAKEQ 28
            LCR+ R+AEAYEVFDYAVESKSLTDV+AY +LESTLK LK A+EQ
Sbjct: 416  LCRSGRIAEAYEVFDYAVESKSLTDVSAYLSLESTLKSLKNAREQ 460


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