BLASTX nr result

ID: Atractylodes21_contig00022242 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00022242
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48359.1| unknown [Lotus japonicus]                               72   6e-11
ref|XP_004144627.1| PREDICTED: RING-H2 finger protein ATL18-like...    64   2e-08
gb|AAC68664.1| RING-H2 finger protein RHA1a [Arabidopsis thalian...    59   3e-07
ref|XP_002872581.1| ring-H2 finger protein RHA1a [Arabidopsis ly...    59   3e-07
ref|XP_002872579.1| ring-H2 finger protein RHA1b [Arabidopsis ly...    59   4e-07

>gb|AFK48359.1| unknown [Lotus japonicus]
          Length = 137

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 41/118 (34%), Positives = 62/118 (52%), Gaps = 9/118 (7%)
 Frame = -1

Query: 328 VINLIFYFSLLFPIFRIKNQLLNLLKDSLFHKE--EDDVFLMDLPIILFEDLQDRRHREV 155
           V+ ++FY  +L P+  +K  L +L    LF K+  E    +  LP+  FEDL+ +   E 
Sbjct: 13  VVTIVFYTCILIPLKELKGALASLF--GLFSKDVVEFLAVISSLPVARFEDLRRQCCCEG 70

Query: 154 -------EEMCFICSANFDNDDVVCQLSRCGHVFHSECVGKLIQQKQSDCPFCRSSFF 2
                  E++C IC   F+ +D V +L R GHVFH  C+ + + + Q  CP CRS  F
Sbjct: 71  GDDDELREKICSICLVEFEGEDAVSKLERRGHVFHLNCIEQWLDRCQFSCPLCRSFLF 128


>ref|XP_004144627.1| PREDICTED: RING-H2 finger protein ATL18-like [Cucumis sativus]
           gi|449500186|ref|XP_004161028.1| PREDICTED: RING-H2
           finger protein ATL18-like [Cucumis sativus]
          Length = 125

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/68 (44%), Positives = 39/68 (57%)
 Frame = -1

Query: 205 LPIILFEDLQDRRHREVEEMCFICSANFDNDDVVCQLSRCGHVFHSECVGKLIQQKQSDC 26
           L +  FE+LQ R     EE+C +C   F  + +V QL RC HVFH EC+   +Q+ Q  C
Sbjct: 56  LLVCRFEELQ-RAVGSEEEICSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTC 114

Query: 25  PFCRSSFF 2
           P CRS  F
Sbjct: 115 PLCRSFIF 122


>gb|AAC68664.1| RING-H2 finger protein RHA1a [Arabidopsis thaliana]
           gi|21554250|gb|AAM63325.1| RING-H2 finger protein
           RHA1a-like protein [Arabidopsis thaliana]
          Length = 159

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
 Frame = -1

Query: 205 LPIILFEDLQDRRHREVEEMCFICSANFDNDDVVCQLSRCGHVFHSECVGK-LIQQKQSD 29
           +P++ F DL      + E+ C +C ++F++DD V QL +CGHVFH  C+ + ++   +  
Sbjct: 70  IPVVRFSDLPT----DPEDCCTVCLSDFESDDKVRQLPKCGHVFHHHCLDRWIVDYNKMK 125

Query: 28  CPFCRSSF 5
           CP CR  F
Sbjct: 126 CPVCRHRF 133


>ref|XP_002872581.1| ring-H2 finger protein RHA1a [Arabidopsis lyrata subsp. lyrata]
           gi|297318418|gb|EFH48840.1| ring-H2 finger protein RHA1a
           [Arabidopsis lyrata subsp. lyrata]
          Length = 159

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
 Frame = -1

Query: 205 LPIILFEDLQDRRHREVEEMCFICSANFDNDDVVCQLSRCGHVFHSECVGK-LIQQKQSD 29
           +P++ F DL      + E+ C IC ++FD++D + QL +CGHVFH  C+ + ++   +  
Sbjct: 70  IPVVRFSDLLT----DPEDCCTICLSDFDSNDKIRQLPKCGHVFHQRCLDRWIVDFNKMK 125

Query: 28  CPFCRSSF 5
           CP CR+ F
Sbjct: 126 CPICRNRF 133


>ref|XP_002872579.1| ring-H2 finger protein RHA1b [Arabidopsis lyrata subsp. lyrata]
           gi|297318416|gb|EFH48838.1| ring-H2 finger protein RHA1b
           [Arabidopsis lyrata subsp. lyrata]
          Length = 157

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
 Frame = -1

Query: 205 LPIILFEDLQDRRHREVEEMCFICSANFDNDDVVCQLSRCGHVFHSECVGK-LIQQKQSD 29
           +P++ F DL      + E+ C +C ++F++DD++ QL  CGHVFH  C+ + ++   +  
Sbjct: 69  IPVVRFSDLLT----DPEDCCTVCLSDFNSDDMIRQLPNCGHVFHHRCLDRWIVDCNKMT 124

Query: 28  CPFCRSSF 5
           CP CR+ F
Sbjct: 125 CPICRNRF 132


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