BLASTX nr result

ID: Atractylodes21_contig00022201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00022201
         (949 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266038.1| PREDICTED: E3 ubiquitin-protein ligase arkad...   179   9e-43
emb|CAN73727.1| hypothetical protein VITISV_034074 [Vitis vinifera]   175   1e-41
ref|XP_002324572.1| predicted protein [Populus trichocarpa] gi|2...   172   1e-40
ref|XP_002309314.1| predicted protein [Populus trichocarpa] gi|2...   162   1e-37
ref|NP_001238250.1| uncharacterized protein LOC100527583 [Glycin...   162   1e-37

>ref|XP_002266038.1| PREDICTED: E3 ubiquitin-protein ligase arkadia-like isoform 1
           [Vitis vinifera]
          Length = 193

 Score =  179 bits (454), Expect = 9e-43
 Identities = 101/200 (50%), Positives = 121/200 (60%), Gaps = 7/200 (3%)
 Frame = -1

Query: 685 MAGMLPGVESARRRRLPRXXXXXXXXXXXXXXXXXSVRIRI-------SHDTPTSFLQRS 527
           MAGMLPGVE ARRRR  +                      +        H T +S +QRS
Sbjct: 1   MAGMLPGVECARRRRFHQSGGCSDSPTVAVHGCTRRSSFCLYTSNHENHHATSSSSMQRS 60

Query: 526 MGYQSDEDDKLGGAAREAKERLDGRLRGHLKSEIRRHQNSQERPTSVGRRSSTTSMAMEN 347
           +  Q+  D+KLGG AREAKERLD RLR   KSE  R+++ +      GR     +M +  
Sbjct: 61  VLNQAYSDEKLGGVAREAKERLDERLRTQRKSEPTRNKSKESLRIVDGR-----AMVVGE 115

Query: 346 LQMEVFGSKKSGSKRLRWGRMGLSWKSSNQDECAICLDQFKASEKATHLPCAHRFHSDCL 167
           LQ EVFGSK+SGSKR  WG+  LSWK+S+Q ECAICL+ FKA E   HLPCAHRFHS CL
Sbjct: 116 LQTEVFGSKRSGSKRFSWGK--LSWKASDQVECAICLEGFKAGESLVHLPCAHRFHSRCL 173

Query: 166 LPWLECNAHCPYCRTTVFGS 107
           +PWLE NAHCP CR  +F S
Sbjct: 174 MPWLETNAHCPCCRMGIFVS 193


>emb|CAN73727.1| hypothetical protein VITISV_034074 [Vitis vinifera]
          Length = 193

 Score =  175 bits (444), Expect = 1e-41
 Identities = 100/200 (50%), Positives = 120/200 (60%), Gaps = 7/200 (3%)
 Frame = -1

Query: 685 MAGMLPGVESARRRRLPRXXXXXXXXXXXXXXXXXSVRIRI-------SHDTPTSFLQRS 527
           MAGMLPGVE ARRRR  +                      +        H T +S +QRS
Sbjct: 1   MAGMLPGVECARRRRFHQSGGCSDSPTVAVHGCTRRSSFCLYTSNHENHHATSSSSMQRS 60

Query: 526 MGYQSDEDDKLGGAAREAKERLDGRLRGHLKSEIRRHQNSQERPTSVGRRSSTTSMAMEN 347
           +  Q+  D+KLGG AREAKERLD RLR   KSE  R+++ +      GR     +M +  
Sbjct: 61  VLNQAYSDEKLGGVAREAKERLDERLRTQRKSEPTRNKSKESLRIVDGR-----AMVVGE 115

Query: 346 LQMEVFGSKKSGSKRLRWGRMGLSWKSSNQDECAICLDQFKASEKATHLPCAHRFHSDCL 167
           LQ EVFGSK+SGSKR  WG+  LSWK+S+Q ECAICL+ FKA E   HLPCAHRFHS CL
Sbjct: 116 LQTEVFGSKRSGSKRFSWGK--LSWKASDQVECAICLEGFKAGESLVHLPCAHRFHSRCL 173

Query: 166 LPWLECNAHCPYCRTTVFGS 107
           +PWLE NAHCP  R  +F S
Sbjct: 174 MPWLETNAHCPCXRMGIFVS 193


>ref|XP_002324572.1| predicted protein [Populus trichocarpa] gi|222866006|gb|EEF03137.1|
           predicted protein [Populus trichocarpa]
          Length = 190

 Score =  172 bits (436), Expect = 1e-40
 Identities = 92/193 (47%), Positives = 117/193 (60%), Gaps = 3/193 (1%)
 Frame = -1

Query: 685 MAGMLPGVESARRRRLPRXXXXXXXXXXXXXXXXXSVRIRISHDT---PTSFLQRSMGYQ 515
           MAGMLPGVE ARRRR  +                       SH++     S LQRS+  Q
Sbjct: 1   MAGMLPGVECARRRRFHQSGDSLGAPAHGWSRKPSFCLYTSSHESYHGSVSSLQRSVSSQ 60

Query: 514 SDEDDKLGGAAREAKERLDGRLRGHLKSEIRRHQNSQERPTSVGRRSSTTSMAMENLQME 335
           + ED+KLGG AREAKERLD RLR      +++ + ++   T   R     SM +  LQME
Sbjct: 61  AYEDEKLGGVAREAKERLDERLR------LQKKKTAETTSTGNLRDVDGRSMVLGELQME 114

Query: 334 VFGSKKSGSKRLRWGRMGLSWKSSNQDECAICLDQFKASEKATHLPCAHRFHSDCLLPWL 155
           V+G+K+SGSKR  W +  LSWK+++QDEC ICLD+FK+ E   HLPCAHR+H  CL+PWL
Sbjct: 115 VYGTKRSGSKRFNWAK--LSWKAADQDECTICLDRFKSGETLVHLPCAHRYHPRCLVPWL 172

Query: 154 ECNAHCPYCRTTV 116
           E N HCP CR  +
Sbjct: 173 ENNGHCPCCRMEI 185


>ref|XP_002309314.1| predicted protein [Populus trichocarpa] gi|222855290|gb|EEE92837.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score =  162 bits (410), Expect = 1e-37
 Identities = 94/199 (47%), Positives = 114/199 (57%), Gaps = 9/199 (4%)
 Frame = -1

Query: 685 MAGMLPGVESARRRRLPRXXXXXXXXXXXXXXXXXSVRIRISHDT---PTSFLQRSMGYQ 515
           MAG+LPGVE ARRRR  R                       SH+      S LQRS+  Q
Sbjct: 1   MAGVLPGVECARRRRFHRSGDSLGAPAHGWTRRPSFCLYTSSHENHHGSISSLQRSILNQ 60

Query: 514 SDEDDKLGGAAREAKERLDGRLRGHLKS-EIRRHQNSQ-----ERPTSVGRRSSTTSMAM 353
           + ED+KLGG A+EAKERLD RLR   K  EI R   +       + T   R     SM  
Sbjct: 61  AYEDEKLGGVAKEAKERLDERLRMQKKKPEITRKTMASAQFIWHKSTGNLRGVDGRSMVP 120

Query: 352 ENLQMEVFGSKKSGSKRLRWGRMGLSWKSSNQDECAICLDQFKASEKATHLPCAHRFHSD 173
             LQMEV+G K+SGSKR +W +  LSWK+++QDEC ICLD+FK+ E   HLPCAHR+H  
Sbjct: 121 GELQMEVYGPKRSGSKRYKWAK--LSWKAADQDECTICLDRFKSGETLVHLPCAHRYHPK 178

Query: 172 CLLPWLECNAHCPYCRTTV 116
           CL+PWLE N  CP CR  +
Sbjct: 179 CLVPWLENNGQCPCCRMEI 197


>ref|NP_001238250.1| uncharacterized protein LOC100527583 [Glycine max]
           gi|255632685|gb|ACU16694.1| unknown [Glycine max]
          Length = 202

 Score =  162 bits (409), Expect = 1e-37
 Identities = 93/196 (47%), Positives = 116/196 (59%), Gaps = 5/196 (2%)
 Frame = -1

Query: 685 MAGMLPGVESARRRRLPRXXXXXXXXXXXXXXXXXS--VRIRISHD---TPTSFLQRSMG 521
           MAGMLPGVE ARRRRL R                 S       +H+   + +S LQRSM 
Sbjct: 15  MAGMLPGVECARRRRLHRCLDSNSTSLTSHASTRRSSFCLYTSNHECRLSLSSSLQRSML 74

Query: 520 YQSDEDDKLGGAAREAKERLDGRLRGHLKSEIRRHQNSQERPTSVGRRSSTTSMAMENLQ 341
           YQ   D+ +GG  REAK+RLD + R H  SE +R QNS +     GRR+      +    
Sbjct: 75  YQPHPDENMGGVVREAKQRLDDKFRAHRNSENKR-QNSTK--CVEGRRTR-----IAEFH 126

Query: 340 MEVFGSKKSGSKRLRWGRMGLSWKSSNQDECAICLDQFKASEKATHLPCAHRFHSDCLLP 161
            EV+GSKKSGS+R  W +   SWK+S Q++CA+CL+ F+  E   HLPCAHRFH  CL P
Sbjct: 127 TEVYGSKKSGSRRFSWTKW--SWKASEQEDCAVCLESFRVGETLIHLPCAHRFHDRCLKP 184

Query: 160 WLECNAHCPYCRTTVF 113
           WLE N+HCP CRTT+F
Sbjct: 185 WLENNSHCPCCRTTIF 200


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