BLASTX nr result

ID: Atractylodes21_contig00021929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00021929
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281582.2| PREDICTED: pentatricopeptide repeat-containi...   211   9e-53
emb|CAN61515.1| hypothetical protein VITISV_033964 [Vitis vinifera]   207   8e-52
ref|XP_003588542.1| Pentatricopeptide repeat-containing protein ...   201   7e-50
ref|XP_003545589.1| PREDICTED: pentatricopeptide repeat-containi...   189   3e-46
ref|XP_002309567.1| predicted protein [Populus trichocarpa] gi|2...   183   2e-44

>ref|XP_002281582.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Vitis vinifera]
           gi|296081891|emb|CBI20896.3| unnamed protein product
           [Vitis vinifera]
          Length = 420

 Score =  211 bits (536), Expect = 9e-53
 Identities = 107/192 (55%), Positives = 135/192 (70%)
 Frame = -2

Query: 581 DLIHLCGKIQNAQTAMHVFTSMENHGVKPTSIVLEALISAHLSSGNVTTALSIFETMQNS 402
           +LI LC K+QN   AM VF SME HG+K TS V  ALI   LSSGNV TALS+FE MQ+S
Sbjct: 110 ELIFLCSKVQNVPFAMRVFNSMEAHGIKLTSSVFNALIYTCLSSGNVMTALSLFEIMQSS 169

Query: 401 EDHKPTGHTYNLFISAFANLGNSKAMLAWYSAKMASGFLADLETYEALILGSVILKRFED 222
           E+ KP   TYN FIS ++NLGN KAM AWY A+  +GF ADL TYE+LI G V  + F+ 
Sbjct: 170 ENCKPNSETYNTFISVYSNLGNDKAMQAWYLAQKGAGFSADLRTYESLISGCVRSRNFDC 229

Query: 221 ADRFYEEMLAAKIIPNTSILHHMLVGFCEQKDLEQIRRFLKGILDHRWEINGDMAEKLVG 42
           ADRFYEEM+ + I+PN  IL ++L G CEQ+ + ++ + LK ++D  WEIN  MAEKL+G
Sbjct: 230 ADRFYEEMMLSGIMPNGQILENILRGLCEQRSISKVEQLLKFMMDGEWEINVSMAEKLMG 289

Query: 41  FYCELELVEELE 6
            Y E   VE++E
Sbjct: 290 LYFEHGTVEKME 301


>emb|CAN61515.1| hypothetical protein VITISV_033964 [Vitis vinifera]
          Length = 1331

 Score =  207 bits (528), Expect = 8e-52
 Identities = 105/192 (54%), Positives = 133/192 (69%)
 Frame = -2

Query: 581  DLIHLCGKIQNAQTAMHVFTSMENHGVKPTSIVLEALISAHLSSGNVTTALSIFETMQNS 402
            +LI LC K+QN   AM VF SME HG+K TS V  ALI   LSSGNV TALS+FE MQ+S
Sbjct: 1021 ELIFLCSKVQNVPFAMRVFNSMEAHGIKLTSSVFNALICTCLSSGNVMTALSLFEIMQSS 1080

Query: 401  EDHKPTGHTYNLFISAFANLGNSKAMLAWYSAKMASGFLADLETYEALILGSVILKRFED 222
            E+ KP   TYN FIS ++NLGN KAM AWY A   +GF ADL TYE+LI G    + F+ 
Sbjct: 1081 ENCKPNSETYNTFISVYSNLGNDKAMQAWYLAXKGAGFSADLRTYESLISGCXRSRNFDC 1140

Query: 221  ADRFYEEMLAAKIIPNTSILHHMLVGFCEQKDLEQIRRFLKGILDHRWEINGDMAEKLVG 42
            ADRFYEEM+ + I+P+  IL ++L G CEQ+ + ++ + LK ++D  WEIN  MAEKL+G
Sbjct: 1141 ADRFYEEMMLSGIMPBGQILENILRGLCEQRSISKVEQLLKFMMDGEWEINVSMAEKLMG 1200

Query: 41   FYCELELVEELE 6
             Y E   VE++E
Sbjct: 1201 LYFEHGTVEKME 1212


>ref|XP_003588542.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355477590|gb|AES58793.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 428

 Score =  201 bits (511), Expect = 7e-50
 Identities = 104/192 (54%), Positives = 137/192 (71%)
 Frame = -2

Query: 581 DLIHLCGKIQNAQTAMHVFTSMENHGVKPTSIVLEALISAHLSSGNVTTALSIFETMQNS 402
           +LI LCGK++N Q  ++VFTSME  GVKPTS+V  +LISA LSS ++ TA S+FE M++S
Sbjct: 107 ELIFLCGKLKNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESS 166

Query: 401 EDHKPTGHTYNLFISAFANLGNSKAMLAWYSAKMASGFLADLETYEALILGSVILKRFED 222
           E++KP  HTYN FISAF+  GN  AMLAWYSAK A+G   DL+T+E++I G V  K +E 
Sbjct: 167 ENYKPDFHTYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEI 226

Query: 221 ADRFYEEMLAAKIIPNTSILHHMLVGFCEQKDLEQIRRFLKGILDHRWEINGDMAEKLVG 42
           ADR +EEM  +++IPN +IL  ML GFC QK L +   F K +LD+RW+I+  MA  LV 
Sbjct: 227 ADRVFEEMKISEMIPNVTILESMLKGFCSQKSLCRANEFFKFVLDNRWQISETMAAMLVV 286

Query: 41  FYCELELVEELE 6
            Y E   VE++E
Sbjct: 287 LYHEQGQVEKME 298


>ref|XP_003545589.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Glycine max]
          Length = 421

 Score =  189 bits (480), Expect = 3e-46
 Identities = 95/192 (49%), Positives = 131/192 (68%)
 Frame = -2

Query: 581 DLIHLCGKIQNAQTAMHVFTSMENHGVKPTSIVLEALISAHLSSGNVTTALSIFETMQNS 402
           +LI LCGK+++    M VF+SME  GVKP S+V  +LIS  LSS ++ TA+S+FE M++S
Sbjct: 110 ELIFLCGKVKDVMLGMRVFSSMEATGVKPNSLVFNSLISVCLSSHDIVTAVSLFEIMESS 169

Query: 401 EDHKPTGHTYNLFISAFANLGNSKAMLAWYSAKMASGFLADLETYEALILGSVILKRFED 222
           E +KP  HTYN+FISAF+  GN  AMLAWYSAK A+    DL+ +E+LI G V  ++F+ 
Sbjct: 170 ESYKPDFHTYNIFISAFSKSGNVDAMLAWYSAKKAARLGPDLQMFESLISGCVNSRKFKI 229

Query: 221 ADRFYEEMLAAKIIPNTSILHHMLVGFCEQKDLEQIRRFLKGILDHRWEINGDMAEKLVG 42
           ADR +EEM+ + I+P+ SI+  ML G C+QK L +   F    +D  WEIN +M +KLV 
Sbjct: 230 ADRIFEEMMISGIVPSASIIESMLNGICKQKRLGRAEEFFTFAMDSGWEINENMVDKLVA 289

Query: 41  FYCELELVEELE 6
            Y +L   EE+E
Sbjct: 290 MYLQLGKAEEME 301


>ref|XP_002309567.1| predicted protein [Populus trichocarpa] gi|222855543|gb|EEE93090.1|
           predicted protein [Populus trichocarpa]
          Length = 424

 Score =  183 bits (465), Expect = 2e-44
 Identities = 91/191 (47%), Positives = 128/191 (67%)
 Frame = -2

Query: 578 LIHLCGKIQNAQTAMHVFTSMENHGVKPTSIVLEALISAHLSSGNVTTALSIFETMQNSE 399
           LI LCGKIQN   AMHVF SME  G+KPT+ V  +L+ A L S NV TALS+FE M+NSE
Sbjct: 116 LISLCGKIQNVSLAMHVFASMEARGIKPTTSVFNSLLYACLLSSNVITALSLFEIMENSE 175

Query: 398 DHKPTGHTYNLFISAFANLGNSKAMLAWYSAKMASGFLADLETYEALILGSVILKRFEDA 219
            +KP   TY+ F++ F+NL +   M AW+  K A+GF A L+ YE LI G V  + F+ A
Sbjct: 176 SYKPNSETYDKFVAGFSNLRDVNKMQAWFVGKRAAGFSASLQNYECLISGCVKARDFDTA 235

Query: 218 DRFYEEMLAAKIIPNTSILHHMLVGFCEQKDLEQIRRFLKGILDHRWEINGDMAEKLVGF 39
           DR YEEM++  I+P+  I+  +L G C++   ++++ FL  +L+ ++EING+M E +V  
Sbjct: 236 DRLYEEMMSLGIMPSLHIMEWVLEGHCKRGSCDKVKEFLNFLLECKFEINGNMIENVVRL 295

Query: 38  YCELELVEELE 6
           Y EL  V+E+E
Sbjct: 296 YSELGKVDEME 306