BLASTX nr result
ID: Atractylodes21_contig00021667
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes21_contig00021667 (280 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001152192.1| ORF50j [Pinus koraiensis] gi|145048817|gb|AB... 67 1e-09 ref|YP_007507107.1| photosystem II 44 kDa protein (chloroplast) ... 60 2e-07 ref|YP_007474800.1| photosystem II 44 kDa protein (chloroplast) ... 60 2e-07 ref|YP_007375039.1| photosystem II CP43 chlorophyll apoprotein [... 60 2e-07 ref|YP_007353911.1| photosystem II 44 kDa protein (chloroplast) ... 60 2e-07 >ref|YP_001152192.1| ORF50j [Pinus koraiensis] gi|145048817|gb|ABP35435.1| ORF50j [Pinus koraiensis] Length = 50 Score = 67.0 bits (162), Expect = 1e-09 Identities = 35/48 (72%), Positives = 35/48 (72%) Frame = -3 Query: 146 MERTGSKSRSIPFSNXXXXXXXXXACHKCPTKKKNPRTK*EVANQLLG 3 MERTGSKSRSIPFSN ACHK PTKKKNPRTK EV NQL G Sbjct: 1 MERTGSKSRSIPFSNPAAAARALPACHKWPTKKKNPRTKWEVDNQLRG 48 >ref|YP_007507107.1| photosystem II 44 kDa protein (chloroplast) [Salvia miltiorrhiza] gi|401879738|gb|AFQ30925.1| photosystem II 44 kDa protein (chloroplast) [Salvia miltiorrhiza] Length = 473 Score = 60.1 bits (144), Expect = 2e-07 Identities = 30/53 (56%), Positives = 30/53 (56%) Frame = +1 Query: 1 SPRSWLATSXXXXXXXXXXXXXWHXXXXXXXXXXFEKGIDRDFEPVLSMTPLN 159 SPRSWLATS WH FEKGIDRDFEPVLSMTPLN Sbjct: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473 >ref|YP_007474800.1| photosystem II 44 kDa protein (chloroplast) [Taxus mairei] gi|372863278|gb|AEX99349.1| photosystem II 44 kDa protein (chloroplast) [Taxus mairei] gi|372863355|gb|AEX99425.1| photosystem II 44 kDa protein (chloroplast) [Taxus mairei] gi|372863519|gb|AEX99587.1| photosystem II 44 kDa protein (chloroplast) [Taxus mairei] Length = 473 Score = 60.1 bits (144), Expect = 2e-07 Identities = 30/53 (56%), Positives = 30/53 (56%) Frame = +1 Query: 1 SPRSWLATSXXXXXXXXXXXXXWHXXXXXXXXXXFEKGIDRDFEPVLSMTPLN 159 SPRSWLATS WH FEKGIDRDFEPVLSMTPLN Sbjct: 421 SPRSWLATSHFVLGFFFFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473 >ref|YP_007375039.1| photosystem II CP43 chlorophyll apoprotein [Quercus rubra] gi|441421918|gb|AGC31242.1| photosystem II CP43 chlorophyll apoprotein [Quercus rubra] Length = 487 Score = 60.1 bits (144), Expect = 2e-07 Identities = 30/53 (56%), Positives = 30/53 (56%) Frame = +1 Query: 1 SPRSWLATSXXXXXXXXXXXXXWHXXXXXXXXXXFEKGIDRDFEPVLSMTPLN 159 SPRSWLATS WH FEKGIDRDFEPVLSMTPLN Sbjct: 435 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 487 >ref|YP_007353911.1| photosystem II 44 kDa protein (chloroplast) [Tectona grandis] gi|438687600|emb|CCP47126.1| photosystem II 44 kDa protein (chloroplast) [Tectona grandis] gi|438688284|emb|CCP47215.1| photosystem II 44 kDa protein (chloroplast) [Tectona grandis] gi|438688408|emb|CCP47304.1| photosystem II 44 kDa protein (chloroplast) [Tectona grandis] Length = 473 Score = 60.1 bits (144), Expect = 2e-07 Identities = 30/53 (56%), Positives = 30/53 (56%) Frame = +1 Query: 1 SPRSWLATSXXXXXXXXXXXXXWHXXXXXXXXXXFEKGIDRDFEPVLSMTPLN 159 SPRSWLATS WH FEKGIDRDFEPVLSMTPLN Sbjct: 421 SPRSWLATSHFVLGFFFFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473