BLASTX nr result

ID: Atractylodes21_contig00021667 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00021667
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001152192.1| ORF50j [Pinus koraiensis] gi|145048817|gb|AB...    67   1e-09
ref|YP_007507107.1| photosystem II 44 kDa protein (chloroplast) ...    60   2e-07
ref|YP_007474800.1| photosystem II 44 kDa protein (chloroplast) ...    60   2e-07
ref|YP_007375039.1| photosystem II CP43 chlorophyll apoprotein [...    60   2e-07
ref|YP_007353911.1| photosystem II 44 kDa protein (chloroplast) ...    60   2e-07

>ref|YP_001152192.1| ORF50j [Pinus koraiensis] gi|145048817|gb|ABP35435.1| ORF50j [Pinus
           koraiensis]
          Length = 50

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 35/48 (72%), Positives = 35/48 (72%)
 Frame = -3

Query: 146 MERTGSKSRSIPFSNXXXXXXXXXACHKCPTKKKNPRTK*EVANQLLG 3
           MERTGSKSRSIPFSN         ACHK PTKKKNPRTK EV NQL G
Sbjct: 1   MERTGSKSRSIPFSNPAAAARALPACHKWPTKKKNPRTKWEVDNQLRG 48


>ref|YP_007507107.1| photosystem II 44 kDa protein (chloroplast) [Salvia miltiorrhiza]
           gi|401879738|gb|AFQ30925.1| photosystem II 44 kDa
           protein (chloroplast) [Salvia miltiorrhiza]
          Length = 473

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/53 (56%), Positives = 30/53 (56%)
 Frame = +1

Query: 1   SPRSWLATSXXXXXXXXXXXXXWHXXXXXXXXXXFEKGIDRDFEPVLSMTPLN 159
           SPRSWLATS             WH          FEKGIDRDFEPVLSMTPLN
Sbjct: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473


>ref|YP_007474800.1| photosystem II 44 kDa protein (chloroplast) [Taxus mairei]
           gi|372863278|gb|AEX99349.1| photosystem II 44 kDa
           protein (chloroplast) [Taxus mairei]
           gi|372863355|gb|AEX99425.1| photosystem II 44 kDa
           protein (chloroplast) [Taxus mairei]
           gi|372863519|gb|AEX99587.1| photosystem II 44 kDa
           protein (chloroplast) [Taxus mairei]
          Length = 473

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/53 (56%), Positives = 30/53 (56%)
 Frame = +1

Query: 1   SPRSWLATSXXXXXXXXXXXXXWHXXXXXXXXXXFEKGIDRDFEPVLSMTPLN 159
           SPRSWLATS             WH          FEKGIDRDFEPVLSMTPLN
Sbjct: 421 SPRSWLATSHFVLGFFFFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473


>ref|YP_007375039.1| photosystem II CP43 chlorophyll apoprotein [Quercus rubra]
           gi|441421918|gb|AGC31242.1| photosystem II CP43
           chlorophyll apoprotein [Quercus rubra]
          Length = 487

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/53 (56%), Positives = 30/53 (56%)
 Frame = +1

Query: 1   SPRSWLATSXXXXXXXXXXXXXWHXXXXXXXXXXFEKGIDRDFEPVLSMTPLN 159
           SPRSWLATS             WH          FEKGIDRDFEPVLSMTPLN
Sbjct: 435 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 487


>ref|YP_007353911.1| photosystem II 44 kDa protein (chloroplast) [Tectona grandis]
           gi|438687600|emb|CCP47126.1| photosystem II 44 kDa
           protein (chloroplast) [Tectona grandis]
           gi|438688284|emb|CCP47215.1| photosystem II 44 kDa
           protein (chloroplast) [Tectona grandis]
           gi|438688408|emb|CCP47304.1| photosystem II 44 kDa
           protein (chloroplast) [Tectona grandis]
          Length = 473

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/53 (56%), Positives = 30/53 (56%)
 Frame = +1

Query: 1   SPRSWLATSXXXXXXXXXXXXXWHXXXXXXXXXXFEKGIDRDFEPVLSMTPLN 159
           SPRSWLATS             WH          FEKGIDRDFEPVLSMTPLN
Sbjct: 421 SPRSWLATSHFVLGFFFFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473


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