BLASTX nr result

ID: Atractylodes21_contig00021635 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00021635
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW90598.1| E3 ubiquitin ligase [Solanum tuberosum]                 66   3e-09
gb|ADI71977.1| E3 ubiquitin ligase [Capsicum annuum]                   65   4e-09
ref|XP_002276539.1| PREDICTED: RING-H2 finger protein ATL80 [Vit...    64   2e-08
ref|XP_002526834.1| protein with unknown function [Ricinus commu...    63   2e-08
ref|XP_002526830.1| protein with unknown function [Ricinus commu...    63   2e-08

>gb|AFW90598.1| E3 ubiquitin ligase [Solanum tuberosum]
          Length = 170

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 30/45 (66%), Positives = 35/45 (77%), Gaps = 4/45 (8%)
 Frame = -3

Query: 257 WLGSHSSCPSCRQILVITRCLKCGEIPAVS----SGQISTQAEHK 135
           WLGSHSSCPSCRQILV+TRC KCGE+PAVS       ++T AE +
Sbjct: 113 WLGSHSSCPSCRQILVVTRCRKCGELPAVSCKSDGATVTTPAESR 157


>gb|ADI71977.1| E3 ubiquitin ligase [Capsicum annuum]
          Length = 197

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 28/43 (65%), Positives = 32/43 (74%)
 Frame = -3

Query: 257 WLGSHSSCPSCRQILVITRCLKCGEIPAVSSGQISTQAEHKGS 129
           WLGSHSSCPSCR ILV+TRC KCGE+P  SS   S+ A   G+
Sbjct: 138 WLGSHSSCPSCRSILVVTRCHKCGELPVASSSSSSSSAAATGA 180


>ref|XP_002276539.1| PREDICTED: RING-H2 finger protein ATL80 [Vitis vinifera]
           gi|296082570|emb|CBI21575.3| unnamed protein product
           [Vitis vinifera]
          Length = 182

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 28/46 (60%), Positives = 35/46 (76%)
 Frame = -3

Query: 257 WLGSHSSCPSCRQILVITRCLKCGEIPAVSSGQISTQAEHKGSQHG 120
           WL SHSSCPSCRQILV+TRC +CG+ PA+ SG  ++ AE K  + G
Sbjct: 130 WLSSHSSCPSCRQILVVTRCRQCGKFPAI-SGTATSDAELKAREQG 174


>ref|XP_002526834.1| protein with unknown function [Ricinus communis]
           gi|223533838|gb|EEF35569.1| protein with unknown
           function [Ricinus communis]
          Length = 207

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 27/45 (60%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
 Frame = -3

Query: 257 WLGSHSSCPSCRQILVITRCLKCGEIPAVSS-GQISTQAEHKGSQ 126
           WLGSHSSCPSCRQILV+ RC KCG+ P +SS G  + +A+ K ++
Sbjct: 138 WLGSHSSCPSCRQILVMARCHKCGQFPTISSCGGATVEADRKATE 182


>ref|XP_002526830.1| protein with unknown function [Ricinus communis]
           gi|223533834|gb|EEF35565.1| protein with unknown
           function [Ricinus communis]
          Length = 258

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 27/45 (60%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
 Frame = -3

Query: 257 WLGSHSSCPSCRQILVITRCLKCGEIPAVSS-GQISTQAEHKGSQ 126
           WLGSHSSCPSCRQILV+ RC KCG+ P +SS G  + +A+ K ++
Sbjct: 189 WLGSHSSCPSCRQILVMARCHKCGQFPTISSCGGATVEADRKATE 233


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