BLASTX nr result

ID: Atractylodes21_contig00021619 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00021619
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002877464.1| hypothetical protein ARALYDRAFT_485002 [Arab...   149   3e-34
ref|XP_002516498.1| Exosome complex exonuclease RRP46, putative ...   148   4e-34
ref|XP_002281273.1| PREDICTED: exosome complex exonuclease RRP46...   148   5e-34
emb|CBI20856.3| unnamed protein product [Vitis vinifera]              148   5e-34
ref|NP_190207.1| exosome complex component RRP46 [Arabidopsis th...   147   9e-34

>ref|XP_002877464.1| hypothetical protein ARALYDRAFT_485002 [Arabidopsis lyrata subsp.
           lyrata] gi|297323302|gb|EFH53723.1| hypothetical protein
           ARALYDRAFT_485002 [Arabidopsis lyrata subsp. lyrata]
          Length = 242

 Score =  149 bits (375), Expect = 3e-34
 Identities = 66/83 (79%), Positives = 75/83 (90%)
 Frame = +2

Query: 131 MEVDRADGRTPNQRRPVACTRGILHRAHGSSSWAQGDTKVIAAVYGPKAGTRKNENPEKA 310
           ME+DR DGRTPNQ RP+AC+R ILHR HGS+SW+QGDTKV+AAVYGPKAGT+KNEN EKA
Sbjct: 1   MEIDREDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKA 60

Query: 311 CIEVIWKPKTGQSGKPEREYEMV 379
           C EVIWKPKTGQ GK E+EYEM+
Sbjct: 61  CFEVIWKPKTGQIGKVEKEYEMI 83


>ref|XP_002516498.1| Exosome complex exonuclease RRP46, putative [Ricinus communis]
           gi|223544318|gb|EEF45839.1| Exosome complex exonuclease
           RRP46, putative [Ricinus communis]
          Length = 211

 Score =  148 bits (374), Expect = 4e-34
 Identities = 65/83 (78%), Positives = 76/83 (91%)
 Frame = +2

Query: 131 MEVDRADGRTPNQRRPVACTRGILHRAHGSSSWAQGDTKVIAAVYGPKAGTRKNENPEKA 310
           M++DR DGRTPNQ RP+AC+R +L+RAHGS+SW QGDTKV+AAVYGPK GT+KNENPEKA
Sbjct: 1   MDIDRDDGRTPNQLRPLACSRNVLNRAHGSASWCQGDTKVLAAVYGPKPGTKKNENPEKA 60

Query: 311 CIEVIWKPKTGQSGKPEREYEMV 379
           CIEVIWKPKTGQ GK E+EYEM+
Sbjct: 61  CIEVIWKPKTGQIGKVEKEYEMI 83


>ref|XP_002281273.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Vitis
           vinifera]
          Length = 245

 Score =  148 bits (373), Expect = 5e-34
 Identities = 65/83 (78%), Positives = 77/83 (92%)
 Frame = +2

Query: 131 MEVDRADGRTPNQRRPVACTRGILHRAHGSSSWAQGDTKVIAAVYGPKAGTRKNENPEKA 310
           ME+ R DGRT NQ RP+AC+R IL+RAHGS+SW+QGDTKV+AAVYGPKAGT+KNENPEKA
Sbjct: 3   MEIGRDDGRTANQLRPLACSRNILNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 62

Query: 311 CIEVIWKPKTGQSGKPEREYEMV 379
           CIEV+WKPKTGQ GKPE+EYE++
Sbjct: 63  CIEVVWKPKTGQIGKPEKEYEVI 85


>emb|CBI20856.3| unnamed protein product [Vitis vinifera]
          Length = 243

 Score =  148 bits (373), Expect = 5e-34
 Identities = 65/83 (78%), Positives = 77/83 (92%)
 Frame = +2

Query: 131 MEVDRADGRTPNQRRPVACTRGILHRAHGSSSWAQGDTKVIAAVYGPKAGTRKNENPEKA 310
           ME+ R DGRT NQ RP+AC+R IL+RAHGS+SW+QGDTKV+AAVYGPKAGT+KNENPEKA
Sbjct: 1   MEIGRDDGRTANQLRPLACSRNILNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60

Query: 311 CIEVIWKPKTGQSGKPEREYEMV 379
           CIEV+WKPKTGQ GKPE+EYE++
Sbjct: 61  CIEVVWKPKTGQIGKPEKEYEVI 83


>ref|NP_190207.1| exosome complex component RRP46 [Arabidopsis thaliana]
           gi|79314404|ref|NP_001030817.1| exosome complex
           component RRP46 [Arabidopsis thaliana]
           gi|79314427|ref|NP_001030818.1| exosome complex
           component RRP46 [Arabidopsis thaliana]
           gi|79314448|ref|NP_001030819.1| exosome complex
           component RRP46 [Arabidopsis thaliana]
           gi|145332769|ref|NP_001078250.1| exosome complex
           component RRP46 [Arabidopsis thaliana]
           gi|334185757|ref|NP_001190019.1| exosome complex
           component RRP46 [Arabidopsis thaliana]
           gi|7799009|emb|CAB90948.1| putative protein [Arabidopsis
           thaliana] gi|27808554|gb|AAO24557.1| At3g46210
           [Arabidopsis thaliana] gi|110736314|dbj|BAF00127.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|222423954|dbj|BAH19939.1| AT3G46210 [Arabidopsis
           thaliana] gi|222424492|dbj|BAH20201.1| AT3G46210
           [Arabidopsis thaliana] gi|332644608|gb|AEE78129.1|
           exosome complex component RRP46 [Arabidopsis thaliana]
           gi|332644609|gb|AEE78130.1| exosome complex component
           RRP46 [Arabidopsis thaliana] gi|332644610|gb|AEE78131.1|
           exosome complex component RRP46 [Arabidopsis thaliana]
           gi|332644611|gb|AEE78132.1| exosome complex component
           RRP46 [Arabidopsis thaliana] gi|332644612|gb|AEE78133.1|
           exosome complex component RRP46 [Arabidopsis thaliana]
           gi|332644613|gb|AEE78134.1| exosome complex component
           RRP46 [Arabidopsis thaliana]
          Length = 239

 Score =  147 bits (371), Expect = 9e-34
 Identities = 65/83 (78%), Positives = 75/83 (90%)
 Frame = +2

Query: 131 MEVDRADGRTPNQRRPVACTRGILHRAHGSSSWAQGDTKVIAAVYGPKAGTRKNENPEKA 310
           ME+DR DGRTPNQ RP+AC+R ILHR HGS+SW+QGDTKV+AAVYGPKAGT+KNEN EKA
Sbjct: 1   MEIDREDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKA 60

Query: 311 CIEVIWKPKTGQSGKPEREYEMV 379
           C EVIWKPK+GQ GK E+EYEM+
Sbjct: 61  CFEVIWKPKSGQIGKVEKEYEMI 83


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