BLASTX nr result

ID: Atractylodes21_contig00020873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00020873
         (559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40924.3| unnamed protein product [Vitis vinifera]              256   2e-66
ref|XP_002524359.1| RNA binding protein, putative [Ricinus commu...   252   2e-65
ref|XP_002326676.1| predicted protein [Populus trichocarpa] gi|2...   251   7e-65
ref|XP_003635077.1| PREDICTED: uncharacterized protein LOC100855...   247   1e-63
ref|XP_003550921.1| PREDICTED: uncharacterized protein LOC100809...   245   4e-63

>emb|CBI40924.3| unnamed protein product [Vitis vinifera]
          Length = 1203

 Score =  256 bits (653), Expect = 2e-66
 Identities = 128/185 (69%), Positives = 150/185 (81%)
 Frame = -3

Query: 557  LTLYGSVAFDEDFEAEITENHDARTEVSILSTSPDPELTEEFINTELYARVSVAVMFNKL 378
            LTLYGSVAFDEDFEAE+ ENHDAR EVS+L+ SPDPELTE FINTELYARVSVAV+F KL
Sbjct: 611  LTLYGSVAFDEDFEAELAENHDARNEVSLLAKSPDPELTEIFINTELYARVSVAVLFCKL 670

Query: 377  ADLADMVGSNDEVESSHAXXXXXXXXXXXXLNSVVNDTDLAKELYKKHSATHRRKVRAWQ 198
            ADLADMVG  +E +   A            L+SVVNDTDL+KELYKK+S  HR K+RAWQ
Sbjct: 671  ADLADMVGPINENDDCRAAIESGKLFLLELLDSVVNDTDLSKELYKKYSRIHRHKIRAWQ 730

Query: 197  MICILSRFVDQDIISEVMSHLHTALYRNNMPAVRQYLETFAIYVYLKFPSLVGEQLVPMV 18
            MIC+LSRF+ QDI+  V   LH +LYRNN+P+VRQYLETFAI++YLKFPSLV +QLVP++
Sbjct: 731  MICVLSRFIHQDIVQRVSCFLHISLYRNNLPSVRQYLETFAIHIYLKFPSLVVDQLVPIL 790

Query: 17   RKYDM 3
            + YDM
Sbjct: 791  QDYDM 795


>ref|XP_002524359.1| RNA binding protein, putative [Ricinus communis]
            gi|223536320|gb|EEF37970.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 1744

 Score =  252 bits (644), Expect = 2e-65
 Identities = 128/185 (69%), Positives = 146/185 (78%)
 Frame = -3

Query: 557  LTLYGSVAFDEDFEAEITENHDARTEVSILSTSPDPELTEEFINTELYARVSVAVMFNKL 378
            LTLYGSVAFDEDFEAE+ EN DARTEVS+L+  PD ELTE FINTELYARVSVAV+ N L
Sbjct: 1155 LTLYGSVAFDEDFEAELAENRDARTEVSLLAKCPDSELTEAFINTELYARVSVAVLLNNL 1214

Query: 377  ADLADMVGSNDEVESSHAXXXXXXXXXXXXLNSVVNDTDLAKELYKKHSATHRRKVRAWQ 198
            ADLA++VGS +E E   A            L+S VND DLAKELYKK+S  HRRK+R WQ
Sbjct: 1215 ADLANLVGSANENEDCSAALESGKIFLLELLDSAVNDKDLAKELYKKYSGIHRRKIRVWQ 1274

Query: 197  MICILSRFVDQDIISEVMSHLHTALYRNNMPAVRQYLETFAIYVYLKFPSLVGEQLVPMV 18
            MIC+LSRFV  DI+ +V   LH ALYRNN+PAVRQYLETFAI +YLKFP+LVGEQLVP++
Sbjct: 1275 MICVLSRFVTDDIVGKVTCSLHIALYRNNLPAVRQYLETFAINIYLKFPTLVGEQLVPIL 1334

Query: 17   RKYDM 3
            R YDM
Sbjct: 1335 RDYDM 1339


>ref|XP_002326676.1| predicted protein [Populus trichocarpa] gi|222833998|gb|EEE72475.1|
            predicted protein [Populus trichocarpa]
          Length = 1224

 Score =  251 bits (640), Expect = 7e-65
 Identities = 127/185 (68%), Positives = 148/185 (80%)
 Frame = -3

Query: 557  LTLYGSVAFDEDFEAEITENHDARTEVSILSTSPDPELTEEFINTELYARVSVAVMFNKL 378
            L+LYGSVAFDEDFEAE+ +N DA TEVS+L+ SPDPELTE FINTELYARVSVAV+F KL
Sbjct: 639  LSLYGSVAFDEDFEAELCDNQDASTEVSLLAKSPDPELTEAFINTELYARVSVAVLFYKL 698

Query: 377  ADLADMVGSNDEVESSHAXXXXXXXXXXXXLNSVVNDTDLAKELYKKHSATHRRKVRAWQ 198
            ADLA++VGS +E E  HA            L+S VND DLAKELYKK+S  HRRK+RAWQ
Sbjct: 699  ADLANLVGSANENEDCHAALESGKLFLQELLDSAVNDKDLAKELYKKYSGIHRRKIRAWQ 758

Query: 197  MICILSRFVDQDIISEVMSHLHTALYRNNMPAVRQYLETFAIYVYLKFPSLVGEQLVPMV 18
            MIC+LSRFV  DI+++V   LH +LYRNN PAVRQYLETFAI +YLKFP LV EQLVP++
Sbjct: 759  MICVLSRFVTDDIVAQVTHSLHISLYRNNFPAVRQYLETFAINIYLKFPLLVREQLVPIL 818

Query: 17   RKYDM 3
            R Y+M
Sbjct: 819  RDYNM 823


>ref|XP_003635077.1| PREDICTED: uncharacterized protein LOC100855390 [Vitis vinifera]
          Length = 920

 Score =  247 bits (630), Expect = 1e-63
 Identities = 129/202 (63%), Positives = 151/202 (74%), Gaps = 17/202 (8%)
 Frame = -3

Query: 557  LTLYGSVAFDEDFEAEITENHDARTEVSILSTSPDPELTEEFINTELYARVSVAVMFNKL 378
            LTLYGSVAFDEDFEAE+ ENHDAR EVS+L+ SPDPELTE FINTELYARVSVAV+F KL
Sbjct: 481  LTLYGSVAFDEDFEAELAENHDARNEVSLLAKSPDPELTEIFINTELYARVSVAVLFCKL 540

Query: 377  ADLADMVGSNDEVESSHAXXXXXXXXXXXXLNSVVNDTDLAKELYKKHS----------- 231
            ADLADMVG  +E +   A            L+SVVNDTDL+KELYKK+S           
Sbjct: 541  ADLADMVGPINENDDCRAAIESGKLFLLELLDSVVNDTDLSKELYKKYSRKWAFGIKTSD 600

Query: 230  ------ATHRRKVRAWQMICILSRFVDQDIISEVMSHLHTALYRNNMPAVRQYLETFAIY 69
                  A HR K+RAWQMIC+LSRF+ QDI+  V   LH +LYRNN+P+VRQYLETFAI+
Sbjct: 601  TLVVAGAIHRHKIRAWQMICVLSRFIHQDIVQRVSCFLHISLYRNNLPSVRQYLETFAIH 660

Query: 68   VYLKFPSLVGEQLVPMVRKYDM 3
            +YLKFPSLV +QLVP+++ YDM
Sbjct: 661  IYLKFPSLVVDQLVPILQDYDM 682


>ref|XP_003550921.1| PREDICTED: uncharacterized protein LOC100809637 [Glycine max]
          Length = 834

 Score =  245 bits (625), Expect = 4e-63
 Identities = 125/185 (67%), Positives = 151/185 (81%)
 Frame = -3

Query: 557 LTLYGSVAFDEDFEAEITENHDARTEVSILSTSPDPELTEEFINTELYARVSVAVMFNKL 378
           L+LYGSVAFDEDFEAE+ +N+DAR EVSIL+ SPDPELTE FINTE+YARVSVAV+F KL
Sbjct: 251 LSLYGSVAFDEDFEAELADNNDARLEVSILARSPDPELTEAFINTEVYARVSVAVLFYKL 310

Query: 377 ADLADMVGSNDEVESSHAXXXXXXXXXXXXLNSVVNDTDLAKELYKKHSATHRRKVRAWQ 198
           ADLA MVGS +E  +  A            L+SVVND DLAKELYKK+SA HRRK+RAWQ
Sbjct: 311 ADLARMVGSPNEDANCIAAQESGKSFLLELLDSVVNDKDLAKELYKKYSAIHRRKIRAWQ 370

Query: 197 MICILSRFVDQDIISEVMSHLHTALYRNNMPAVRQYLETFAIYVYLKFPSLVGEQLVPMV 18
           +IC+LS FV++DI+ +V+ +L+ +L RNN+PAVRQYLETFAI +YLKFPSLV E LVP++
Sbjct: 371 IICVLSPFVEEDIVGKVLEYLYISLNRNNLPAVRQYLETFAINIYLKFPSLVKEHLVPIL 430

Query: 17  RKYDM 3
           R YDM
Sbjct: 431 RDYDM 435


Top