BLASTX nr result

ID: Atractylodes21_contig00019411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00019411
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003628951.1| U2-associated protein SR140 [Medicago trunca...   105   4e-21
ref|XP_002308714.1| predicted protein [Populus trichocarpa] gi|2...   102   2e-20
ref|XP_003531944.1| PREDICTED: U2 snRNP-associated SURP motif-co...    99   3e-19
ref|XP_003548683.1| PREDICTED: U2 snRNP-associated SURP motif-co...    99   4e-19
emb|CBI21155.3| unnamed protein product [Vitis vinifera]               98   6e-19

>ref|XP_003628951.1| U2-associated protein SR140 [Medicago truncatula]
            gi|355522973|gb|AET03427.1| U2-associated protein SR140
            [Medicago truncatula]
          Length = 1139

 Score =  105 bits (262), Expect = 4e-21
 Identities = 50/66 (75%), Positives = 59/66 (89%)
 Frame = +2

Query: 5    ELAINAGIPAHSDSGLNEEQRQKLRHLEVALMEYRESLEERGIKNMEEIERKVAIHRKRL 184
            E A ++  PAH+DSG+NEEQRQKLR LEVAL+EYRESLEERGIKN+EEIE+KV +HRKRL
Sbjct: 871  EAAADSSFPAHADSGMNEEQRQKLRRLEVALIEYRESLEERGIKNLEEIEKKVLMHRKRL 930

Query: 185  EFEYGL 202
            + EYGL
Sbjct: 931  QVEYGL 936


>ref|XP_002308714.1| predicted protein [Populus trichocarpa] gi|222854690|gb|EEE92237.1|
            predicted protein [Populus trichocarpa]
          Length = 988

 Score =  102 bits (255), Expect = 2e-20
 Identities = 50/67 (74%), Positives = 57/67 (85%)
 Frame = +2

Query: 2    MELAINAGIPAHSDSGLNEEQRQKLRHLEVALMEYRESLEERGIKNMEEIERKVAIHRKR 181
            ME A +A IP   +SG+NEEQRQKLR LEVAL+EYRESLEE+G+KN EE ERKVA+HRKR
Sbjct: 814  MEFATDASIPTQPESGMNEEQRQKLRRLEVALIEYRESLEEQGMKNSEEFERKVAVHRKR 873

Query: 182  LEFEYGL 202
            LE EYGL
Sbjct: 874  LESEYGL 880


>ref|XP_003531944.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
           [Glycine max]
          Length = 972

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 48/66 (72%), Positives = 56/66 (84%)
 Frame = +2

Query: 5   ELAINAGIPAHSDSGLNEEQRQKLRHLEVALMEYRESLEERGIKNMEEIERKVAIHRKRL 184
           E A +    AH+DSG+NEEQRQKLR LEVAL+EYRESLEERG+KN+EEIE+KV  HRKRL
Sbjct: 801 ESAADTRFSAHADSGMNEEQRQKLRRLEVALIEYRESLEERGVKNLEEIEKKVQSHRKRL 860

Query: 185 EFEYGL 202
           + EYGL
Sbjct: 861 QVEYGL 866


>ref|XP_003548683.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
            [Glycine max]
          Length = 971

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 48/66 (72%), Positives = 56/66 (84%)
 Frame = +2

Query: 5    ELAINAGIPAHSDSGLNEEQRQKLRHLEVALMEYRESLEERGIKNMEEIERKVAIHRKRL 184
            E A +    AH+DSG+NEEQRQKLR LEVAL+EY ESLEERGIKN+EEIE+KV +HRKRL
Sbjct: 803  ESAADRSFSAHADSGMNEEQRQKLRRLEVALIEYGESLEERGIKNLEEIEKKVQLHRKRL 862

Query: 185  EFEYGL 202
            + EYGL
Sbjct: 863  QVEYGL 868


>emb|CBI21155.3| unnamed protein product [Vitis vinifera]
          Length = 941

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 51/68 (75%), Positives = 57/68 (83%), Gaps = 1/68 (1%)
 Frame = +2

Query: 2   MELAINAGIPAHSDSGL-NEEQRQKLRHLEVALMEYRESLEERGIKNMEEIERKVAIHRK 178
           ME A  + IP+  DSG+ NEE RQKLR LEVAL+EYRESLEERGIK+ EEIERKVAIHRK
Sbjct: 781 MEFATESSIPSQPDSGMMNEEHRQKLRRLEVALIEYRESLEERGIKSSEEIERKVAIHRK 840

Query: 179 RLEFEYGL 202
           RL+ EYGL
Sbjct: 841 RLQSEYGL 848


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