BLASTX nr result

ID: Atractylodes21_contig00019043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00019043
         (496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280000.1| PREDICTED: E3 ubiquitin-protein ligase At3g0...   143   2e-32
ref|XP_002509832.1| protein binding protein, putative [Ricinus c...   142   4e-32
ref|XP_002298023.1| predicted protein [Populus trichocarpa] gi|2...   124   8e-27
ref|XP_004143894.1| PREDICTED: E3 ubiquitin-protein ligase At3g0...   122   4e-26
gb|ACU24554.1| unknown [Glycine max]                                  119   2e-25

>ref|XP_002280000.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Vitis
           vinifera]
          Length = 213

 Score =  143 bits (360), Expect = 2e-32
 Identities = 79/166 (47%), Positives = 99/166 (59%), Gaps = 2/166 (1%)
 Frame = +3

Query: 3   MGGCCCCFSSKGVELTSSPRFYHYPIASEERQPXXXXXXXXXXXXXXXXVDTNLETSIPD 182
           MGGCCCC SSKG EL  +P +Y+ P ASEE +P                VDTNL TS PD
Sbjct: 1   MGGCCCC-SSKGTELNGTPAYYYCPRASEEHEPLSSHHGAASTLSTGLLVDTNLGTSPPD 59

Query: 183 TYRPPPAPIPYDVNVGHPRSPLNNRETSGTKQEAPVQTNNTEAVGEITISNSGETVTK-- 356
           TYRPPPAPIPYDV++GHP++P    E+   K +  VQT N+ ++GE    N  ET+ K  
Sbjct: 60  TYRPPPAPIPYDVDLGHPQTPPVAEESCVNKNDTVVQTTNSGSLGEAVEGNMLETLAKCE 119

Query: 357 EAKGSDCKELTDIELVATKEVDDELEKSGELKKSSGPLLPPEECPT 494
           + K SDCK L   EL ++KE + EL KSG+   SS      + CPT
Sbjct: 120 DLKQSDCKMLAQSELTSSKETEVELSKSGDPIVSSTD--EEDVCPT 163


>ref|XP_002509832.1| protein binding protein, putative [Ricinus communis]
           gi|223549731|gb|EEF51219.1| protein binding protein,
           putative [Ricinus communis]
          Length = 212

 Score =  142 bits (357), Expect = 4e-32
 Identities = 75/166 (45%), Positives = 101/166 (60%), Gaps = 2/166 (1%)
 Frame = +3

Query: 3   MGGCCCCFSSKGVELTSSPRFYHYPIASEERQPXXXXXXXXXXXXXXXXVDTNLETSIPD 182
           MGGCCCC SSKG E+ S+P +Y+YP ASEE  P                VDTNL+TS+PD
Sbjct: 1   MGGCCCC-SSKGAEINSAPAYYYYPRASEEHVPLSSRHGSVATLSTGLLVDTNLDTSVPD 59

Query: 183 TYRPPPAPIPYDVNVGHPRSPLNNRETSGTKQEAPVQTNNTEAVGEITISNSGETVTK-- 356
            YRPPP PIP+++ +G P++P   +ETS  K +  VQT N+ +V E T +N+ ET  K  
Sbjct: 60  AYRPPPPPIPFEMAIGCPQTPQGAQETSSDKDDGTVQTTNSGSVQETTYTNTRETSIKCE 119

Query: 357 EAKGSDCKELTDIELVATKEVDDELEKSGELKKSSGPLLPPEECPT 494
           + K  DCK  T++EL + KE++ E  KS EL  S+      + CPT
Sbjct: 120 DVKEPDCKAQTNLELDSAKELEVEFSKSVELLVSATE--EEDVCPT 163


>ref|XP_002298023.1| predicted protein [Populus trichocarpa] gi|222845281|gb|EEE82828.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score =  124 bits (311), Expect = 8e-27
 Identities = 69/165 (41%), Positives = 92/165 (55%), Gaps = 2/165 (1%)
 Frame = +3

Query: 3   MGGCCCCFSSKGVELTSSPRFYHYPIASEERQPXXXXXXXXXXXXXXXXVDTNLETSIPD 182
           MGGCCCC S    +  S+P +Y+YP A  E  P                VDTNL+TS+PD
Sbjct: 1   MGGCCCCSSKGAAQSNSAPPYYYYPRAPAEHVPLSSHHAAGSALSTGLLVDTNLDTSVPD 60

Query: 183 TYRPPPAPIPYDVNVGHPRSPLNNRETSGTKQEAPVQTNNTEAVGEITISNSGETVT--K 356
            YRPPPAP+P+DV VGH ++   +RET G K +  +QT N+ +  E T  N+ ET    +
Sbjct: 61  AYRPPPAPMPFDVAVGHLQTLHRSRETCGDKNDGALQTTNSASGQENTGLNTRETSAECE 120

Query: 357 EAKGSDCKELTDIELVATKEVDDELEKSGELKKSSGPLLPPEECP 491
           + K  DCK   + EL A KE++ EL KS E   S+      E+CP
Sbjct: 121 DVKELDCKAQINSELDAAKELEIELSKSVEPLVSA---TEEEDCP 162


>ref|XP_004143894.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Cucumis
           sativus]
          Length = 211

 Score =  122 bits (305), Expect = 4e-26
 Identities = 76/168 (45%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
 Frame = +3

Query: 3   MGGCCCCFSSKGVELTSSPRFYHYPIASEERQPXXXXXXXXXXXXXXXXVDTNLETSIPD 182
           MGGCCCC SSKG E   +P +Y+YP ASEE  P                VDTNL+TSIPD
Sbjct: 1   MGGCCCC-SSKGTESNIAPGYYYYPRASEEHVPLSPLRTPREFSTGLL-VDTNLDTSIPD 58

Query: 183 TYRPPPAPIPYDVNVGHPRSPLNNRETSGTKQEAPVQTNNTEAVGEITISNSGETVTK-- 356
           TYR PP P+PYDV +  P +P   +E S  K EA  QT N+  + E    N+ ET  K  
Sbjct: 59  TYRSPPLPMPYDVVLTSPLTPPVVQEISCYKNEAAAQTTNSNTIQETACINTRETSAKCE 118

Query: 357 EAKGSDCKELTDIELVATKEVDDELEKSGELKKSSGPLLPPEE---CP 491
               SDCK+ TD E+ A KE ++EL K  E       +LP EE   CP
Sbjct: 119 GVDESDCKKHTDFEVDALKESENELSKGVE-----SAVLPIEEEDVCP 161


>gb|ACU24554.1| unknown [Glycine max]
          Length = 212

 Score =  119 bits (299), Expect = 2e-25
 Identities = 64/150 (42%), Positives = 85/150 (56%), Gaps = 2/150 (1%)
 Frame = +3

Query: 3   MGGCCCCFSSKGVELTSSPRFYHYPIASEERQPXXXXXXXXXXXXXXXXVDTNLETSIPD 182
           MGGCCCC SSK   L++ P +Y+YP ASEE  P                VDTNL+TS PD
Sbjct: 1   MGGCCCCCSSKETVLSAPPAYYYYPRASEEHVPLSSHPGAASAFSGRLLVDTNLDTSSPD 60

Query: 183 TYRPPPAPIPYDVNVGHPRSPLNNRETSGTKQEAPVQTNNTEAVGEITISNSGETVTK-- 356
           TYRPPPAPIP++V +G  ++P   +E    K    + + N+ A+ E    +   T  K  
Sbjct: 61  TYRPPPAPIPFNVTLGTTQTPPAAQEIRSDKNNTSLPSTNSNAIQEPVARDIHGTSAKLE 120

Query: 357 EAKGSDCKELTDIELVATKEVDDELEKSGE 446
           E K S+CK  TD+EL + K  + EL KSG+
Sbjct: 121 EPKESECKVQTDLELDSAKGSEIELAKSGK 150


Top