BLASTX nr result

ID: Atractylodes21_contig00019011 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00019011
         (713 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002863224.1| hypothetical protein ARALYDRAFT_497141 [Arab...   108   2e-27
emb|CAN66877.1| hypothetical protein VITISV_009278 [Vitis vinifera]   114   3e-23
prf||1211235DD NADH dehydrogenase 2-like ORF 180                      107   2e-21
ref|YP_817527.1| NADH-plastoquinone oxidoreductase subunit 2 [Co...    83   6e-14
ref|XP_003591523.1| NAD(P)H-quinone oxidoreductase subunit 2 A [...    81   2e-13

>ref|XP_002863224.1| hypothetical protein ARALYDRAFT_497141 [Arabidopsis lyrata subsp.
           lyrata] gi|297309058|gb|EFH39483.1| hypothetical protein
           ARALYDRAFT_497141 [Arabidopsis lyrata subsp. lyrata]
          Length = 440

 Score =  108 bits (271), Expect(2) = 2e-27
 Identities = 50/56 (89%), Positives = 52/56 (92%), Gaps = 3/56 (5%)
 Frame = -2

Query: 409 WFSSFRDYECNRSIRRQKDHPKMIISWLLRTNQIRWFY---FLTCSYGTKIEKIEK 251
           WFSSFRDYECNRSIRRQKDHPKMIISWLLRTNQIRWF+   F TCSYGTK+EKIEK
Sbjct: 139 WFSSFRDYECNRSIRRQKDHPKMIISWLLRTNQIRWFHFSIFRTCSYGTKVEKIEK 194



 Score = 39.7 bits (91), Expect(2) = 2e-27
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = -1

Query: 254 KNQSFTTTDEGFLEKLRI 201
           KNQSFTTTDEGFLEKLRI
Sbjct: 194 KNQSFTTTDEGFLEKLRI 211


>emb|CAN66877.1| hypothetical protein VITISV_009278 [Vitis vinifera]
          Length = 158

 Score =  114 bits (284), Expect = 3e-23
 Identities = 51/53 (96%), Positives = 51/53 (96%)
 Frame = -3

Query: 711 LLTYTKECGSFDKFLPLYLSLRCLDFSKLHGHAGEKCYPHSDQDRTFTCSNNN 553
           LLTYTKECGSFDKFLPLYLSLRCLDFSKLHGHA EKCYPHSDQD TFTCSNNN
Sbjct: 106 LLTYTKECGSFDKFLPLYLSLRCLDFSKLHGHAEEKCYPHSDQDITFTCSNNN 158


>prf||1211235DD NADH dehydrogenase 2-like ORF 180
          Length = 180

 Score =  107 bits (268), Expect = 2e-21
 Identities = 50/51 (98%), Positives = 50/51 (98%)
 Frame = -2

Query: 712 TPDVYEGVRFVR*IPTSLSISEMFGFFKTPWTCRREMLSPLGPRQNFYLFK 560
           TPDVYEGVRFVR IPTSLSISEMFGFFKTPWTCRREMLSPLGPRQNFYLFK
Sbjct: 130 TPDVYEGVRFVREIPTSLSISEMFGFFKTPWTCRREMLSPLGPRQNFYLFK 180


>ref|YP_817527.1| NADH-plastoquinone oxidoreductase subunit 2 [Coffea arabica]
           gi|288561930|sp|P0CC48.1|NU2C1_COFAR RecName:
           Full=NAD(P)H-quinone oxidoreductase subunit 2 A,
           chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
           subunit 2 A; AltName: Full=NADH-plastoquinone
           oxidoreductase subunit 2 A gi|116242208|gb|ABJ89723.1|
           NADH-plastoquinone oxidoreductase subunit 2 [Coffea
           arabica]
          Length = 541

 Score = 82.8 bits (203), Expect = 6e-14
 Identities = 38/40 (95%), Positives = 39/40 (97%)
 Frame = -2

Query: 712 TPDVYEGVRFVR*IPTSLSISEMFGFFKTPWTCRREMLSP 593
           TPDVYEGVRFVR IPTSLSISEMFGFFKTPWTCRRE+LSP
Sbjct: 253 TPDVYEGVRFVREIPTSLSISEMFGFFKTPWTCRREILSP 292


>ref|XP_003591523.1| NAD(P)H-quinone oxidoreductase subunit 2 A [Medicago truncatula]
           gi|355480571|gb|AES61774.1| NAD(P)H-quinone
           oxidoreductase subunit 2 A [Medicago truncatula]
          Length = 172

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 38/42 (90%), Positives = 39/42 (92%)
 Frame = -2

Query: 712 TPDVYEGVRFVR*IPTSLSISEMFGFFKTPWTCRREMLSPLG 587
           TPDVYEGVRFVR IPTSLSISEMFGFFKT WTCRR+ML PLG
Sbjct: 130 TPDVYEGVRFVREIPTSLSISEMFGFFKTLWTCRRDMLFPLG 171


Top