BLASTX nr result

ID: Atractylodes21_contig00017462 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00017462
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329317.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09
ref|XP_002524388.1| ATP binding protein, putative [Ricinus commu...    64   1e-08
ref|XP_002525969.1| DNA double-strand break repair rad50 ATPase,...    59   4e-07
ref|XP_002312374.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
gb|AAG00257.1|AC002130_22 F1N21.5 [Arabidopsis thaliana]               56   3e-06

>ref|XP_002329317.1| predicted protein [Populus trichocarpa] gi|222870771|gb|EEF07902.1|
            predicted protein [Populus trichocarpa]
          Length = 1156

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 43/119 (36%), Positives = 66/119 (55%), Gaps = 12/119 (10%)
 Frame = -1

Query: 328  TPPTQDSVDTKEENEEKVIQNPE----ITSAP--SKGVAGEDGDAN------KRVDTHES 185
            T     +++ ++E E+  + +P+    + SAP  S G A E+G++         +DT + 
Sbjct: 1045 TVKASSNLNNEKEKEDDGVSSPQDGNLLRSAPAASAGAASENGESMHFARCANIMDTLDG 1104

Query: 184  DRIVRSNDAILVENTEISEDDNGTYEYSGDNRDDENDDVSEQHPGEMSIGKKLWTFFST 8
            D   R  D    EN  +SE+ NGT E +G+  DDE + +   HPGE+SIGKKLWTF +T
Sbjct: 1105 DGSARRMD----ENAALSEEINGTPEGAGEYDDDEEESL---HPGEVSIGKKLWTFLTT 1156


>ref|XP_002524388.1| ATP binding protein, putative [Ricinus communis]
            gi|223536349|gb|EEF37999.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 1172

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 43/116 (37%), Positives = 60/116 (51%), Gaps = 15/116 (12%)
 Frame = -1

Query: 310  SVDTKEENEE-----KVIQNPEITSAPSKGVAGEDGDANKRVDTHESDRIVRSNDAILVE 146
            SV T E+  +     + I  PE  SA S GVA E   +   V     +   +++    VE
Sbjct: 1057 SVKTGEKESDGGDAAEPIPKPETVSALSLGVASETEKSTDLVKFSTENVNDQADATKSVE 1116

Query: 145  NTEISEDDNGTYEYS----------GDNRDDENDDVSEQHPGEMSIGKKLWTFFST 8
             TE+SE+ N T EY            D ++D +DD   +HPGE+SIGKK+WTFF+T
Sbjct: 1117 ITELSEEVNDTSEYGVEDENGSTIHEDTQEDCDDDDESEHPGEVSIGKKIWTFFTT 1172


>ref|XP_002525969.1| DNA double-strand break repair rad50 ATPase, putative [Ricinus
            communis] gi|223534701|gb|EEF36393.1| DNA double-strand
            break repair rad50 ATPase, putative [Ricinus communis]
          Length = 1163

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 44/117 (37%), Positives = 60/117 (51%), Gaps = 20/117 (17%)
 Frame = -1

Query: 298  KEENEEKVIQNPEITSAPSKGVAGEDGDANKRVDTHESDRIVRSNDAI----LVENTEIS 131
            +E+ EE  ++ P  T     G+A E+G  N R +  E   +V   DA     LVE   +S
Sbjct: 1056 REDKEEGGVRGPTST-----GIASENG-GNARFEQLE---VVSDTDADSTRNLVEYAALS 1106

Query: 130  EDDNGTYE---------------YSGDNRDDENDDVSEQ-HPGEMSIGKKLWTFFST 8
            E+ NGT +               + GD  D+E++D  E  HPGE SIGKKLWTFF+T
Sbjct: 1107 EEVNGTPDEGGEFGVAEEYRSESHRGDEDDEEDEDEDESVHPGEASIGKKLWTFFTT 1163


>ref|XP_002312374.1| predicted protein [Populus trichocarpa] gi|222852194|gb|EEE89741.1|
           predicted protein [Populus trichocarpa]
          Length = 128

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 24/113 (21%)
 Frame = -1

Query: 274 IQNPEITSAPSKGVAGEDGDANK--RVDTHES-----DRIVR---------SNDAILVEN 143
           IQNPE  S  S GV  E+  +    +V T +S     D++VR         +  A  V  
Sbjct: 16  IQNPETASGLSLGVTSENNKSTDVVQVTTLKSVELSQDKVVRFQTTDVDYQAEAAKSVGI 75

Query: 142 TEISEDDNGTYEY-----SGDNRDDENDDVSE---QHPGEMSIGKKLWTFFST 8
           TE+SE+ NG  ++     +G    ++ DD  E   QHPGE+S+GKK+WTFF+T
Sbjct: 76  TELSEEVNGIPDFEDEAENGSTVHEDEDDYDEDELQHPGEVSMGKKIWTFFTT 128


>gb|AAG00257.1|AC002130_22 F1N21.5 [Arabidopsis thaliana]
          Length = 1166

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
 Frame = -1

Query: 286  EEKVIQNPEITSAPSKGVAGEDGDANKRVDTHESDRIVRSNDAILVENTE----ISEDDN 119
            +E+ I   + T+  S GVA  D   +  V  HE+       DA   + T+    +SED N
Sbjct: 1072 QEEGIHCTQATATASVGVAVSDNGVSTNVVQHEATADSEDTDAGSPKRTDESEAMSEDVN 1131

Query: 118  GT-YEYSGDNRDDENDDVSEQHPGEMSIGKKLWTFFST 8
             T      D  DDE+D    +HPG++SIGKKLWTF +T
Sbjct: 1132 KTPLRADSDGEDDESD---AEHPGKVSIGKKLWTFLTT 1166