BLASTX nr result

ID: Atractylodes21_contig00017408 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00017408
         (552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279907.2| PREDICTED: arginine/serine-rich-splicing fac...   239   2e-61
emb|CAN82624.1| hypothetical protein VITISV_021436 [Vitis vinifera]   239   2e-61
gb|AAS00039.1| splicing factor-like protein [Vitis riparia]           239   2e-61
emb|CBI31839.3| unnamed protein product [Vitis vinifera]              229   3e-58
ref|XP_002322436.1| predicted protein [Populus trichocarpa] gi|2...   229   3e-58

>ref|XP_002279907.2| PREDICTED: arginine/serine-rich-splicing factor RSP40-like [Vitis
           vinifera]
          Length = 480

 Score =  239 bits (611), Expect = 2e-61
 Identities = 121/176 (68%), Positives = 130/176 (73%)
 Frame = +3

Query: 21  GFAFVYMEDERDAEDAIRALDRYEFGRKGRRLRVEWTKQERNVRQPAXXXXXXXXXXXXK 200
           GFAF+YMEDERDAEDAIR LDR  FGRKGRRLRVEWTKQER +R+P+            K
Sbjct: 38  GFAFIYMEDERDAEDAIRGLDRTGFGRKGRRLRVEWTKQERGIRRPSGSRRSSTNLRPAK 97

Query: 201 TLFVINFDPYNTRTRDLERHFDPYGKILNIRIRRNFAFIQFELQEDATKALEATNMSKLM 380
           TLFVINFDPYNTRTRDLERHFDPYGKILNIRIRRNFAFIQ+E QEDAT+ALEATNMSKLM
Sbjct: 98  TLFVINFDPYNTRTRDLERHFDPYGKILNIRIRRNFAFIQYESQEDATRALEATNMSKLM 157

Query: 381 DRVISVEYAIKDDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRRDRGSPDYGRG 548
           DRVISVEYA++DDD                             YRR+RGSPDYGRG
Sbjct: 158 DRVISVEYAVRDDDERRNGYSPDGRRRDKSSERSYDKGRSLSPYRRERGSPDYGRG 213


>emb|CAN82624.1| hypothetical protein VITISV_021436 [Vitis vinifera]
          Length = 479

 Score =  239 bits (611), Expect = 2e-61
 Identities = 121/176 (68%), Positives = 130/176 (73%)
 Frame = +3

Query: 21  GFAFVYMEDERDAEDAIRALDRYEFGRKGRRLRVEWTKQERNVRQPAXXXXXXXXXXXXK 200
           GFAF+YMEDERDAEDAIR LDR  FGRKGRRLRVEWTKQER +R+P+            K
Sbjct: 36  GFAFIYMEDERDAEDAIRGLDRTGFGRKGRRLRVEWTKQERGIRRPSGSRRSSTNLRPAK 95

Query: 201 TLFVINFDPYNTRTRDLERHFDPYGKILNIRIRRNFAFIQFELQEDATKALEATNMSKLM 380
           TLFVINFDPYNTRTRDLERHFDPYGKILNIRIRRNFAFIQ+E QEDAT+ALEATNMSKLM
Sbjct: 96  TLFVINFDPYNTRTRDLERHFDPYGKILNIRIRRNFAFIQYESQEDATRALEATNMSKLM 155

Query: 381 DRVISVEYAIKDDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRRDRGSPDYGRG 548
           DRVISVEYA++DDD                             YRR+RGSPDYGRG
Sbjct: 156 DRVISVEYAVRDDDERRNGYSPDGRRRDKSSERSYDKGRSLSPYRRERGSPDYGRG 211


>gb|AAS00039.1| splicing factor-like protein [Vitis riparia]
          Length = 478

 Score =  239 bits (611), Expect = 2e-61
 Identities = 121/176 (68%), Positives = 130/176 (73%)
 Frame = +3

Query: 21  GFAFVYMEDERDAEDAIRALDRYEFGRKGRRLRVEWTKQERNVRQPAXXXXXXXXXXXXK 200
           GFAF+YMEDERDAEDAIR LDR  FGRKGRRLRVEWTKQER +R+P+            K
Sbjct: 36  GFAFIYMEDERDAEDAIRGLDRTGFGRKGRRLRVEWTKQERGIRRPSGSRRSSTNLRPAK 95

Query: 201 TLFVINFDPYNTRTRDLERHFDPYGKILNIRIRRNFAFIQFELQEDATKALEATNMSKLM 380
           TLFVINFDPYNTRTRDLERHFDPYGKILNIRIRRNFAFIQ+E QEDAT+ALEATNMSKLM
Sbjct: 96  TLFVINFDPYNTRTRDLERHFDPYGKILNIRIRRNFAFIQYESQEDATRALEATNMSKLM 155

Query: 381 DRVISVEYAIKDDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRRDRGSPDYGRG 548
           DRVISVEYA++DDD                             YRR+RGSPDYGRG
Sbjct: 156 DRVISVEYAVRDDDERRNGYSPDGRRRDKSSERSYDKGRSLSPYRRERGSPDYGRG 211


>emb|CBI31839.3| unnamed protein product [Vitis vinifera]
          Length = 196

 Score =  229 bits (583), Expect = 3e-58
 Identities = 120/182 (65%), Positives = 128/182 (70%), Gaps = 4/182 (2%)
 Frame = +3

Query: 18  QGFAFVYMEDERDAEDAIRALDRYEFGRKGRRLRVEWTKQERNVRQPAXXXXXXXXXXXX 197
           QGFAF+YMEDERDAEDAIR LDR  FGRKGRRLRVEWTKQER +R+P+            
Sbjct: 13  QGFAFIYMEDERDAEDAIRGLDRTGFGRKGRRLRVEWTKQERGIRRPSGSRRSSTNLRPA 72

Query: 198 KTLFVINFDPYNTRTRDLERHFDPYGKILNIRIRRNFAFIQFELQEDATKALEATNMSKL 377
           KTLFVINFDPYNTRTRDLERHFDPYGKILNIRIRRNFAFIQ+E QEDAT+ALEATNMSKL
Sbjct: 73  KTLFVINFDPYNTRTRDLERHFDPYGKILNIRIRRNFAFIQYESQEDATRALEATNMSKL 132

Query: 378 MDRVISVEYAIKDDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----YRRDRGSPDYGR 545
           MDRVISVEYA++DDD                                  R DR  PDYGR
Sbjct: 133 MDRVISVEYAVRDDDERRNGYSPDGRRRDKERTSHDSARGPSRSPYRSERSDRAIPDYGR 192

Query: 546 GR 551
           GR
Sbjct: 193 GR 194


>ref|XP_002322436.1| predicted protein [Populus trichocarpa] gi|222869432|gb|EEF06563.1|
           predicted protein [Populus trichocarpa]
          Length = 343

 Score =  229 bits (583), Expect = 3e-58
 Identities = 111/176 (63%), Positives = 130/176 (73%)
 Frame = +3

Query: 21  GFAFVYMEDERDAEDAIRALDRYEFGRKGRRLRVEWTKQERNVRQPAXXXXXXXXXXXXK 200
           GFAF+YMEDERDAEDAIR LDR EFGRKGRRLRVEWTKQER +R+P             K
Sbjct: 36  GFAFIYMEDERDAEDAIRGLDRVEFGRKGRRLRVEWTKQERGIRRPGGTSRRSTNTRPSK 95

Query: 201 TLFVINFDPYNTRTRDLERHFDPYGKILNIRIRRNFAFIQFELQEDATKALEATNMSKLM 380
           TLFVINFDP++TRT+DLERHF+PYG+I+++RIRRNFAF+Q+E QEDATKAL+ATN+SKL+
Sbjct: 96  TLFVINFDPHHTRTKDLERHFEPYGRIVSVRIRRNFAFVQYEAQEDATKALDATNLSKLL 155

Query: 381 DRVISVEYAIKDDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRRDRGSPDYGRG 548
           DRVISVEYA++DDD                             YRR+RGSPDYGRG
Sbjct: 156 DRVISVEYAVRDDDERKDGYSPDRSRDRSPDRRGHDRRRSPSPYRRERGSPDYGRG 211


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