BLASTX nr result

ID: Atractylodes21_contig00017325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00017325
         (527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|B1ABR6.1|RBR_HIEPI RecName: Full=Retinoblastoma-related prote...   170   1e-40
sp|B1ABS0.1|RBR_HIEPL RecName: Full=Retinoblastoma-related prote...   168   4e-40
sp|Q9SLZ4.1|RBR1_PEA RecName: Full=Retinoblastoma-related protei...   156   2e-36
ref|XP_003627961.1| Retinoblastoma-related protein [Medicago tru...   155   3e-36
sp|A9UL14.1|RBR_MEDSA RecName: Full=Retinoblastoma-related prote...   155   3e-36

>sp|B1ABR6.1|RBR_HIEPI RecName: Full=Retinoblastoma-related protein
            gi|167593883|gb|ABZ85628.1| retinoblastoma-related
            protein [Hieracium piloselloides]
          Length = 1005

 Score =  170 bits (431), Expect = 1e-40
 Identities = 86/104 (82%), Positives = 93/104 (89%)
 Frame = -3

Query: 525  PKKVSAVHNVYVSPLQWTKMDALISHGSKSYYACGGESTHAYQSPSKDLTAINSRLNSRS 346
            PKKVSAVHNVYVSPL+ TKMDALISHGSKSYYAC GESTHAYQSPSKDLTAIN+RLN   
Sbjct: 902  PKKVSAVHNVYVSPLRSTKMDALISHGSKSYYACVGESTHAYQSPSKDLTAINNRLNGTR 961

Query: 345  KVKGALNFDEVEVGLVSDSLVANSQYLQNGKGGPSSSSGQLKTE 214
            KV+G+LNFDEV+VGLVSDSLV+ S YLQNGKG  SSS  +LKTE
Sbjct: 962  KVRGSLNFDEVDVGLVSDSLVSQSLYLQNGKGPASSSGQELKTE 1005


>sp|B1ABS0.1|RBR_HIEPL RecName: Full=Retinoblastoma-related protein
            gi|167593891|gb|ABZ85632.1| retinoblastoma-related
            protein [Hieracium pilosella]
          Length = 1008

 Score =  168 bits (426), Expect = 4e-40
 Identities = 89/107 (83%), Positives = 95/107 (88%), Gaps = 3/107 (2%)
 Frame = -3

Query: 525  PKKVSAVHNVYVSPLQWTKMDALISHGSKSYYACGGESTHAYQSPSKDLTAINSRLNSRS 346
            PKKVSAVHNVYVSPL+ TKMDALISHGSKSYYAC GESTHAYQSPSKDLTAIN+RLN   
Sbjct: 902  PKKVSAVHNVYVSPLRSTKMDALISHGSKSYYACVGESTHAYQSPSKDLTAINNRLNGTR 961

Query: 345  KVKGALNFDEVEVGLVSDSLVANSQYLQNGKG--GPSSSSGQ-LKTE 214
            KV+G+LNFDEV+VGLVSDSLV  S YLQNG+   GPSSSSGQ LKTE
Sbjct: 962  KVRGSLNFDEVDVGLVSDSLVTQSLYLQNGQNGKGPSSSSGQELKTE 1008


>sp|Q9SLZ4.1|RBR1_PEA RecName: Full=Retinoblastoma-related protein 1; Short=PsRB1
            gi|6681366|dbj|BAA88690.1| retinoblastoma-related protein
            [Pisum sativum]
          Length = 1026

 Score =  156 bits (395), Expect = 2e-36
 Identities = 80/104 (76%), Positives = 88/104 (84%)
 Frame = -3

Query: 525  PKKVSAVHNVYVSPLQWTKMDALISHGSKSYYACGGESTHAYQSPSKDLTAINSRLNSRS 346
            PKKVSA HNVYVSPL+ +KMDALISH SKSYYAC GESTHAYQSPSKDLTAIN+RLN   
Sbjct: 920  PKKVSATHNVYVSPLRSSKMDALISHSSKSYYACVGESTHAYQSPSKDLTAINNRLNGNR 979

Query: 345  KVKGALNFDEVEVGLVSDSLVANSQYLQNGKGGPSSSSGQLKTE 214
            KV+G LNFD+V+VGLVSDS+VANS YLQNG    SSS   LK+E
Sbjct: 980  KVRGPLNFDDVDVGLVSDSMVANSLYLQNGSSA-SSSGAPLKSE 1022


>ref|XP_003627961.1| Retinoblastoma-related protein [Medicago truncatula]
            gi|355521983|gb|AET02437.1| Retinoblastoma-related
            protein [Medicago truncatula]
          Length = 1052

 Score =  155 bits (393), Expect = 3e-36
 Identities = 80/104 (76%), Positives = 88/104 (84%)
 Frame = -3

Query: 525  PKKVSAVHNVYVSPLQWTKMDALISHGSKSYYACGGESTHAYQSPSKDLTAINSRLNSRS 346
            PKKVSA HNVYVSPL+ +KMDALISH SKSYYAC GESTHAYQSPSKDLTAIN+RLNS  
Sbjct: 946  PKKVSAAHNVYVSPLRSSKMDALISHSSKSYYACVGESTHAYQSPSKDLTAINNRLNSNR 1005

Query: 345  KVKGALNFDEVEVGLVSDSLVANSQYLQNGKGGPSSSSGQLKTE 214
            KV+G L FD+V+VGLVSDS+VANS YLQNG    SSS   LK+E
Sbjct: 1006 KVRGPLKFDDVDVGLVSDSMVANSLYLQNGSSA-SSSGAPLKSE 1048


>sp|A9UL14.1|RBR_MEDSA RecName: Full=Retinoblastoma-related protein; Short=MsRBR
            gi|62956049|gb|AAY23367.1| retinoblastoma-related protein
            [Medicago sativa]
          Length = 1025

 Score =  155 bits (393), Expect = 3e-36
 Identities = 80/104 (76%), Positives = 88/104 (84%)
 Frame = -3

Query: 525  PKKVSAVHNVYVSPLQWTKMDALISHGSKSYYACGGESTHAYQSPSKDLTAINSRLNSRS 346
            PKKVSA HNVYVSPL+ +KMDALISH SKSYYAC GESTHAYQSPSKDLTAIN+RLNS  
Sbjct: 919  PKKVSAAHNVYVSPLRSSKMDALISHSSKSYYACVGESTHAYQSPSKDLTAINNRLNSNR 978

Query: 345  KVKGALNFDEVEVGLVSDSLVANSQYLQNGKGGPSSSSGQLKTE 214
            KV+G L FD+V+VGLVSDS+VANS YLQNG    SSS   LK+E
Sbjct: 979  KVRGPLKFDDVDVGLVSDSMVANSLYLQNGSSA-SSSGAPLKSE 1021


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