BLASTX nr result
ID: Atractylodes21_contig00017192
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes21_contig00017192 (332 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI15151.3| unnamed protein product [Vitis vinifera] 81 1e-13 ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor... 81 1e-13 ref|XP_002522713.1| ATP-dependent RNA helicase, putative [Ricinu... 78 7e-13 ref|XP_003527106.1| PREDICTED: putative pre-mRNA-splicing factor... 77 1e-12 ref|XP_003527105.1| PREDICTED: putative pre-mRNA-splicing factor... 77 1e-12 >emb|CBI15151.3| unnamed protein product [Vitis vinifera] Length = 954 Score = 80.9 bits (198), Expect = 1e-13 Identities = 37/55 (67%), Positives = 48/55 (87%) Frame = +3 Query: 168 SDLKTWVSDRLMSLLGYSQPTLVQYLISLSKKASSPSDIFSNLKEMGVSSSNETR 332 S+LK WVSD+LMSLLGYSQPTLVQY++ L+K+ASSP+D+ L E G+S+S+ETR Sbjct: 5 SNLKVWVSDKLMSLLGYSQPTLVQYVVGLAKQASSPADVVGKLVEFGLSASSETR 59 >ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16-like [Vitis vinifera] Length = 1056 Score = 80.9 bits (198), Expect = 1e-13 Identities = 37/55 (67%), Positives = 48/55 (87%) Frame = +3 Query: 168 SDLKTWVSDRLMSLLGYSQPTLVQYLISLSKKASSPSDIFSNLKEMGVSSSNETR 332 S+LK WVSD+LMSLLGYSQPTLVQY++ L+K+ASSP+D+ L E G+S+S+ETR Sbjct: 5 SNLKVWVSDKLMSLLGYSQPTLVQYVVGLAKQASSPADVVGKLVEFGLSASSETR 59 >ref|XP_002522713.1| ATP-dependent RNA helicase, putative [Ricinus communis] gi|223538063|gb|EEF39675.1| ATP-dependent RNA helicase, putative [Ricinus communis] Length = 756 Score = 78.2 bits (191), Expect = 7e-13 Identities = 36/55 (65%), Positives = 47/55 (85%) Frame = +3 Query: 168 SDLKTWVSDRLMSLLGYSQPTLVQYLISLSKKASSPSDIFSNLKEMGVSSSNETR 332 SDLKTWVSD+LMS+LGYSQ T+VQY+I +SK+A+SP+D+ + L E G S+S ETR Sbjct: 4 SDLKTWVSDKLMSILGYSQSTVVQYIIGISKQANSPADVQAKLSEFGFSTSAETR 58 >ref|XP_003527106.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 isoform 2 [Glycine max] Length = 1035 Score = 77.4 bits (189), Expect = 1e-12 Identities = 38/54 (70%), Positives = 46/54 (85%), Gaps = 2/54 (3%) Frame = +3 Query: 162 MGSD--LKTWVSDRLMSLLGYSQPTLVQYLISLSKKASSPSDIFSNLKEMGVSS 317 MGSD LKTWVSD+LMSLLGYSQPT+VQY+I LSK+A+SP+D+ L E G+SS Sbjct: 1 MGSDDNLKTWVSDKLMSLLGYSQPTVVQYMIGLSKQATSPADLVGKLVEFGISS 54 >ref|XP_003527105.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 isoform 1 [Glycine max] Length = 1044 Score = 77.4 bits (189), Expect = 1e-12 Identities = 38/54 (70%), Positives = 46/54 (85%), Gaps = 2/54 (3%) Frame = +3 Query: 162 MGSD--LKTWVSDRLMSLLGYSQPTLVQYLISLSKKASSPSDIFSNLKEMGVSS 317 MGSD LKTWVSD+LMSLLGYSQPT+VQY+I LSK+A+SP+D+ L E G+SS Sbjct: 1 MGSDDNLKTWVSDKLMSLLGYSQPTVVQYMIGLSKQATSPADLVGKLVEFGISS 54