BLASTX nr result

ID: Atractylodes21_contig00017192 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00017192
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15151.3| unnamed protein product [Vitis vinifera]               81   1e-13
ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor...    81   1e-13
ref|XP_002522713.1| ATP-dependent RNA helicase, putative [Ricinu...    78   7e-13
ref|XP_003527106.1| PREDICTED: putative pre-mRNA-splicing factor...    77   1e-12
ref|XP_003527105.1| PREDICTED: putative pre-mRNA-splicing factor...    77   1e-12

>emb|CBI15151.3| unnamed protein product [Vitis vinifera]
          Length = 954

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 37/55 (67%), Positives = 48/55 (87%)
 Frame = +3

Query: 168 SDLKTWVSDRLMSLLGYSQPTLVQYLISLSKKASSPSDIFSNLKEMGVSSSNETR 332
           S+LK WVSD+LMSLLGYSQPTLVQY++ L+K+ASSP+D+   L E G+S+S+ETR
Sbjct: 5   SNLKVWVSDKLMSLLGYSQPTLVQYVVGLAKQASSPADVVGKLVEFGLSASSETR 59


>ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
           helicase DHX16-like [Vitis vinifera]
          Length = 1056

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 37/55 (67%), Positives = 48/55 (87%)
 Frame = +3

Query: 168 SDLKTWVSDRLMSLLGYSQPTLVQYLISLSKKASSPSDIFSNLKEMGVSSSNETR 332
           S+LK WVSD+LMSLLGYSQPTLVQY++ L+K+ASSP+D+   L E G+S+S+ETR
Sbjct: 5   SNLKVWVSDKLMSLLGYSQPTLVQYVVGLAKQASSPADVVGKLVEFGLSASSETR 59


>ref|XP_002522713.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223538063|gb|EEF39675.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 756

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 36/55 (65%), Positives = 47/55 (85%)
 Frame = +3

Query: 168 SDLKTWVSDRLMSLLGYSQPTLVQYLISLSKKASSPSDIFSNLKEMGVSSSNETR 332
           SDLKTWVSD+LMS+LGYSQ T+VQY+I +SK+A+SP+D+ + L E G S+S ETR
Sbjct: 4   SDLKTWVSDKLMSILGYSQSTVVQYIIGISKQANSPADVQAKLSEFGFSTSAETR 58


>ref|XP_003527106.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
           helicase DHX16 isoform 2 [Glycine max]
          Length = 1035

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 38/54 (70%), Positives = 46/54 (85%), Gaps = 2/54 (3%)
 Frame = +3

Query: 162 MGSD--LKTWVSDRLMSLLGYSQPTLVQYLISLSKKASSPSDIFSNLKEMGVSS 317
           MGSD  LKTWVSD+LMSLLGYSQPT+VQY+I LSK+A+SP+D+   L E G+SS
Sbjct: 1   MGSDDNLKTWVSDKLMSLLGYSQPTVVQYMIGLSKQATSPADLVGKLVEFGISS 54


>ref|XP_003527105.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
           helicase DHX16 isoform 1 [Glycine max]
          Length = 1044

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 38/54 (70%), Positives = 46/54 (85%), Gaps = 2/54 (3%)
 Frame = +3

Query: 162 MGSD--LKTWVSDRLMSLLGYSQPTLVQYLISLSKKASSPSDIFSNLKEMGVSS 317
           MGSD  LKTWVSD+LMSLLGYSQPT+VQY+I LSK+A+SP+D+   L E G+SS
Sbjct: 1   MGSDDNLKTWVSDKLMSLLGYSQPTVVQYMIGLSKQATSPADLVGKLVEFGISS 54


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