BLASTX nr result

ID: Atractylodes21_contig00017163 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00017163
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308876.1| chromatin remodeling complex subunit [Populu...   152   3e-35
emb|CBI32804.3| unnamed protein product [Vitis vinifera]              149   2e-34
ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-a...   149   2e-34
ref|XP_002871139.1| SNF2 domain-containing protein [Arabidopsis ...   149   2e-34
gb|AAM13184.1| helicase-like transcription factor-like protein [...   145   3e-33

>ref|XP_002308876.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222854852|gb|EEE92399.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 799

 Score =  152 bits (384), Expect = 3e-35
 Identities = 68/99 (68%), Positives = 87/99 (87%)
 Frame = -2

Query: 299 TYMVGFLVANIVGLQYYSGRISGREMVGLVREPLNPFDPNAIKVVNTRTIQVGHVEKKVA 120
           ++MVGF++ANIVGLQYYSG I+GRE+VGLVREPLNPFD NA+KV+NTR +QVGH+E+ VA
Sbjct: 7   SFMVGFVIANIVGLQYYSGTITGRELVGLVREPLNPFDQNALKVLNTRCLQVGHIERSVA 66

Query: 119 TVLAPLIDSNLVHVEGIVPNTPKNRVQYKLPCHIHVFTR 3
            VL+PLIDSN+++VEGIVPN+     +YK+PC +HVF R
Sbjct: 67  AVLSPLIDSNMINVEGIVPNSRSGGNKYKIPCQVHVFAR 105


>emb|CBI32804.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  149 bits (377), Expect = 2e-34
 Identities = 67/99 (67%), Positives = 85/99 (85%)
 Frame = -2

Query: 299 TYMVGFLVANIVGLQYYSGRISGREMVGLVREPLNPFDPNAIKVVNTRTIQVGHVEKKVA 120
           TY+VGF++ NIVG+QYYSG ISGRE VGLVREPLNP+D NAIKV+NT TIQVGH+++  A
Sbjct: 53  TYLVGFVIVNIVGIQYYSGTISGRERVGLVREPLNPYDRNAIKVLNTTTIQVGHIDRSAA 112

Query: 119 TVLAPLIDSNLVHVEGIVPNTPKNRVQYKLPCHIHVFTR 3
            VLAPL+D+NLV VEGIVPNTP +  +Y++PC +H+F +
Sbjct: 113 AVLAPLMDANLVTVEGIVPNTPGSGNRYRIPCQVHIFAQ 151


>ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 1-like [Vitis vinifera]
          Length = 874

 Score =  149 bits (377), Expect = 2e-34
 Identities = 67/99 (67%), Positives = 85/99 (85%)
 Frame = -2

Query: 299 TYMVGFLVANIVGLQYYSGRISGREMVGLVREPLNPFDPNAIKVVNTRTIQVGHVEKKVA 120
           TY+VGF++ NIVG+QYYSG ISGRE VGLVREPLNP+D NAIKV+NT TIQVGH+++  A
Sbjct: 40  TYLVGFVIVNIVGIQYYSGTISGRERVGLVREPLNPYDRNAIKVLNTTTIQVGHIDRSAA 99

Query: 119 TVLAPLIDSNLVHVEGIVPNTPKNRVQYKLPCHIHVFTR 3
            VLAPL+D+NLV VEGIVPNTP +  +Y++PC +H+F +
Sbjct: 100 AVLAPLMDANLVTVEGIVPNTPGSGNRYRIPCQVHIFAQ 138


>ref|XP_002871139.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316976|gb|EFH47398.1| SNF2 domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 861

 Score =  149 bits (376), Expect = 2e-34
 Identities = 68/99 (68%), Positives = 87/99 (87%)
 Frame = -2

Query: 299 TYMVGFLVANIVGLQYYSGRISGREMVGLVREPLNPFDPNAIKVVNTRTIQVGHVEKKVA 120
           +Y++GF++ANIVGL+YYSGRI+GREMVGLVREPLNP+D NAI+V+NTR+ QVGH+E+ VA
Sbjct: 36  SYLIGFVIANIVGLKYYSGRINGREMVGLVREPLNPYDNNAIRVLNTRSEQVGHIERTVA 95

Query: 119 TVLAPLIDSNLVHVEGIVPNTPKNRVQYKLPCHIHVFTR 3
            VLAPLIDS+ + VEGIVPNT  N  ++K+PC IHVF +
Sbjct: 96  AVLAPLIDSHTIIVEGIVPNTRSNSNRFKIPCQIHVFAK 134


>gb|AAM13184.1| helicase-like transcription factor-like protein [Arabidopsis
           thaliana]
          Length = 310

 Score =  145 bits (366), Expect = 3e-33
 Identities = 66/99 (66%), Positives = 86/99 (86%)
 Frame = -2

Query: 299 TYMVGFLVANIVGLQYYSGRISGREMVGLVREPLNPFDPNAIKVVNTRTIQVGHVEKKVA 120
           +Y++GF++ANIVGL+YYSGRI+GREMVGLVREPLN +D NAI+V+NTR+ QVGH+E+ VA
Sbjct: 42  SYLIGFVIANIVGLKYYSGRINGREMVGLVREPLNVYDNNAIRVLNTRSEQVGHIERTVA 101

Query: 119 TVLAPLIDSNLVHVEGIVPNTPKNRVQYKLPCHIHVFTR 3
            VLAP+IDS+ + VEGIVPNT  N  +Y++PC IHVF +
Sbjct: 102 AVLAPMIDSHTIVVEGIVPNTRSNSNRYRIPCQIHVFAK 140


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