BLASTX nr result

ID: Atractylodes21_contig00017069 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00017069
         (617 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ87406.1| predicted protein [Hordeum vulgare subsp. vulgare]     63   4e-08
gb|AFW73454.1| putative mitochondrial transcription termination ...    60   2e-07
ref|NP_001169079.1| uncharacterized protein LOC100382920 [Zea ma...    60   2e-07
ref|XP_002454276.1| hypothetical protein SORBIDRAFT_04g027830 [S...    60   3e-07
dbj|BAK01406.1| predicted protein [Hordeum vulgare subsp. vulgare]     59   5e-07

>dbj|BAJ87406.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 384

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 31/74 (41%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
 Frame = +1

Query: 13  FFMEELGYTPSALATRGSLLMYSLEKRVKPRYQVFKVLKEKGAIS--NKFHSVMGLSDVN 186
           FF+ E+G  P+ +A R +LL YS+E R++PRY V K LK KG +     +++++ LSD  
Sbjct: 290 FFLSEVGLEPAYIAHRPALLSYSMEGRLRPRYYVIKFLKAKGLLDQYRDYYNIVMLSDKV 349

Query: 187 FVKRIVQRHKEAIP 228
           F++R +  HK+A P
Sbjct: 350 FMERFICPHKKAAP 363


>gb|AFW73454.1| putative mitochondrial transcription termination factor family
           protein [Zea mays]
          Length = 390

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
 Frame = +1

Query: 1   KGLNFFMEELGYTPSALATRGSLLMYSLEKRVKPRYQVFKVLKEKGAISNK--FHSVMGL 174
           +   F + E+G  P  +A R  LLMYSLE+R+ PR+ V  VLKEKG +     F +V+  
Sbjct: 295 RNAEFLLNEVGLPPQYIARRSVLLMYSLERRIVPRHLVLMVLKEKGLVEQDRCFFNVVAP 354

Query: 175 SDVNFVKRIVQRHKEAIP 228
           ++  F+++ V  ++E+IP
Sbjct: 355 TEEKFLEKFVAPYEESIP 372


>ref|NP_001169079.1| uncharacterized protein LOC100382920 [Zea mays]
           gi|223974813|gb|ACN31594.1| unknown [Zea mays]
          Length = 351

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
 Frame = +1

Query: 1   KGLNFFMEELGYTPSALATRGSLLMYSLEKRVKPRYQVFKVLKEKGAISNK--FHSVMGL 174
           +   F + E+G  P  +A R  LLMYSLE+R+ PR+ V  VLKEKG +     F +V+  
Sbjct: 256 RNAEFLLNEVGLPPQYIARRSVLLMYSLERRIVPRHLVLMVLKEKGLVEQDRCFFNVVAP 315

Query: 175 SDVNFVKRIVQRHKEAIP 228
           ++  F+++ V  ++E+IP
Sbjct: 316 TEEKFLEKFVAPYEESIP 333


>ref|XP_002454276.1| hypothetical protein SORBIDRAFT_04g027830 [Sorghum bicolor]
           gi|241934107|gb|EES07252.1| hypothetical protein
           SORBIDRAFT_04g027830 [Sorghum bicolor]
          Length = 390

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
 Frame = +1

Query: 1   KGLNFFMEELGYTPSALATRGSLLMYSLEKRVKPRYQVFKVLKEKGAISNK--FHSVMGL 174
           +   F + E+G  P  +A R  LLMYSLE+R+ PR+ V  VLKEKG +     F +V+  
Sbjct: 295 RNAEFLLNEVGLPPQYIARRSVLLMYSLERRIVPRHVVLTVLKEKGLVEQDRCFFNVVAP 354

Query: 175 SDVNFVKRIVQRHKEAIPD--HLYDS 246
           ++  F ++ V  ++E+IP     YDS
Sbjct: 355 TEEKFFEKFVAPYEESIPGLADTYDS 380


>dbj|BAK01406.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 389

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
 Frame = +1

Query: 13  FFMEELGYTPSALATRGSLLMYSLEKRVKPRYQVFKVLKEKGAISN--KFHSVMGLSDVN 186
           F + E+G  P  +A R  +L YSLE R+KPRY   K LKE G +++   F++ +  S+  
Sbjct: 295 FLVSEVGLEPGYVAHRPVMLYYSLEGRLKPRYYALKFLKENGLLNHDWNFYTAVTRSEKY 354

Query: 187 FVKRIVQRHKEAIPDHLYDSF 249
           F+K+ +  HKEA P HL + +
Sbjct: 355 FMKKCICPHKEAAP-HLAEDY 374


Top