BLASTX nr result
ID: Atractylodes21_contig00016456
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00016456
(1030 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI17056.3| unnamed protein product [Vitis vinifera] 97 1e-36
ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic ... 97 1e-36
ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|2... 90 7e-34
ref|XP_004160105.1| PREDICTED: DNA polymerase epsilon catalytic ... 86 1e-31
ref|XP_004145799.1| PREDICTED: DNA polymerase epsilon catalytic ... 84 3e-31
>emb|CBI17056.3| unnamed protein product [Vitis vinifera]
Length = 2723
Score = 96.7 bits (239), Expect(2) = 1e-36
Identities = 44/56 (78%), Positives = 50/56 (89%)
Frame = +1
Query: 601 NQLHGPALAVIECPYVHLMKSGIRALDDFPCVSVPSNAHDS*YQALGWQIVAAKLG 768
+Q HGP +AVIECP VHL+KSGIRALDD PCV++PSNA DS YQALGWQIVAAK+G
Sbjct: 2074 HQHHGPEVAVIECPNVHLLKSGIRALDDLPCVNIPSNARDSHYQALGWQIVAAKIG 2129
Score = 84.0 bits (206), Expect(2) = 1e-36
Identities = 44/94 (46%), Positives = 55/94 (58%), Gaps = 32/94 (34%)
Frame = +3
Query: 753 SCKIGMQRCAASSRWLNERISFS--------------------------------ILWVS 836
+ KIGMQRCAA+++WLNERIS + +LW+S
Sbjct: 2125 AAKIGMQRCAAATQWLNERISLARYAHVPLGNFEPDWLIFTADLFFSRALRDQQQVLWIS 2184
Query: 837 DNGILDLGGDNEEETCYFDEVNQPILTYLGAIRK 938
DNGI DLGG NEE+TC+ DEV+QP+LTY GA RK
Sbjct: 2185 DNGIPDLGGLNEEDTCFADEVHQPVLTYPGAYRK 2218
>ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic subunit A [Vitis
vinifera]
Length = 2214
Score = 96.7 bits (239), Expect(2) = 1e-36
Identities = 44/56 (78%), Positives = 50/56 (89%)
Frame = +1
Query: 601 NQLHGPALAVIECPYVHLMKSGIRALDDFPCVSVPSNAHDS*YQALGWQIVAAKLG 768
+Q HGP +AVIECP VHL+KSGIRALDD PCV++PSNA DS YQALGWQIVAAK+G
Sbjct: 1565 HQHHGPEVAVIECPNVHLLKSGIRALDDLPCVNIPSNARDSHYQALGWQIVAAKIG 1620
Score = 84.0 bits (206), Expect(2) = 1e-36
Identities = 44/94 (46%), Positives = 55/94 (58%), Gaps = 32/94 (34%)
Frame = +3
Query: 753 SCKIGMQRCAASSRWLNERISFS--------------------------------ILWVS 836
+ KIGMQRCAA+++WLNERIS + +LW+S
Sbjct: 1616 AAKIGMQRCAAATQWLNERISLARYAHVPLGNFEPDWLIFTADLFFSRALRDQQQVLWIS 1675
Query: 837 DNGILDLGGDNEEETCYFDEVNQPILTYLGAIRK 938
DNGI DLGG NEE+TC+ DEV+QP+LTY GA RK
Sbjct: 1676 DNGIPDLGGLNEEDTCFADEVHQPVLTYPGAYRK 1709
>ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|222837682|gb|EEE76047.1|
predicted protein [Populus trichocarpa]
Length = 2221
Score = 90.1 bits (222), Expect(2) = 7e-34
Identities = 40/53 (75%), Positives = 44/53 (83%)
Frame = +1
Query: 610 HGPALAVIECPYVHLMKSGIRALDDFPCVSVPSNAHDS*YQALGWQIVAAKLG 768
HGP LAVIECP HLMKSG+ ALDDFPCVS+PSNA DS YQ LGWQ +AK+G
Sbjct: 1565 HGPTLAVIECPNAHLMKSGVPALDDFPCVSIPSNARDSQYQVLGWQQASAKIG 1617
Score = 81.3 bits (199), Expect(2) = 7e-34
Identities = 44/94 (46%), Positives = 53/94 (56%), Gaps = 32/94 (34%)
Frame = +3
Query: 753 SCKIGMQRCAASSRWLNERISFS--------------------------------ILWVS 836
S KIGMQR AASS+WLNERIS S +LW+S
Sbjct: 1613 SAKIGMQRSAASSQWLNERISLSRYAHVPLGNFELDWLIFTADVFFSRALHDQQQVLWIS 1672
Query: 837 DNGILDLGGDNEEETCYFDEVNQPILTYLGAIRK 938
D+G+ DLGG++EE TC+ DEV QP+LTY GA RK
Sbjct: 1673 DDGVPDLGGNHEESTCFADEVQQPVLTYPGAYRK 1706
>ref|XP_004160105.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like, partial
[Cucumis sativus]
Length = 2051
Score = 85.5 bits (210), Expect(2) = 1e-31
Identities = 37/53 (69%), Positives = 44/53 (83%)
Frame = +1
Query: 610 HGPALAVIECPYVHLMKSGIRALDDFPCVSVPSNAHDS*YQALGWQIVAAKLG 768
HGPALAVI+CP V +KSG+R LDDFPCV++PSNA D+ YQ LGWQ AAK+G
Sbjct: 1563 HGPALAVIQCPSVQRLKSGVRVLDDFPCVTIPSNARDNQYQVLGWQQTAAKIG 1615
Score = 78.6 bits (192), Expect(2) = 1e-31
Identities = 42/94 (44%), Positives = 52/94 (55%), Gaps = 32/94 (34%)
Frame = +3
Query: 753 SCKIGMQRCAASSRWLNERISFS--------------------------------ILWVS 836
+ KIGMQRCAASS+WLNERIS + +LW+S
Sbjct: 1611 AAKIGMQRCAASSQWLNERISLARYAHVPLGNFELDWLIFTADIFFSRALHDQQQVLWIS 1670
Query: 837 DNGILDLGGDNEEETCYFDEVNQPILTYLGAIRK 938
D+G+ D+GG N E+ C+ DEV QPILTY GA RK
Sbjct: 1671 DDGVPDIGGINIEDVCFADEVQQPILTYPGAYRK 1704
>ref|XP_004145799.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Cucumis
sativus]
Length = 2206
Score = 84.0 bits (206), Expect(2) = 3e-31
Identities = 36/53 (67%), Positives = 43/53 (81%)
Frame = +1
Query: 610 HGPALAVIECPYVHLMKSGIRALDDFPCVSVPSNAHDS*YQALGWQIVAAKLG 768
HGP LAVI+CP V +KSG+R LDDFPCV++PSNA D+ YQ LGWQ AAK+G
Sbjct: 1563 HGPTLAVIQCPSVQRLKSGVRVLDDFPCVTIPSNARDNQYQVLGWQQTAAKIG 1615
Score = 78.6 bits (192), Expect(2) = 3e-31
Identities = 42/94 (44%), Positives = 52/94 (55%), Gaps = 32/94 (34%)
Frame = +3
Query: 753 SCKIGMQRCAASSRWLNERISFS--------------------------------ILWVS 836
+ KIGMQRCAASS+WLNERIS + +LW+S
Sbjct: 1611 AAKIGMQRCAASSQWLNERISLARYAHVPLGNFELDWLIFTADIFFSRALHDQQQVLWIS 1670
Query: 837 DNGILDLGGDNEEETCYFDEVNQPILTYLGAIRK 938
D+G+ D+GG N E+ C+ DEV QPILTY GA RK
Sbjct: 1671 DDGVPDIGGINIEDVCFADEVQQPILTYPGAYRK 1704