BLASTX nr result

ID: Atractylodes21_contig00016426 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00016426
         (895 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516173.1| zinc finger protein, putative [Ricinus commu...    80   2e-19
ref|XP_002308505.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-19
ref|XP_003550230.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-...    79   9e-19
ref|XP_003544579.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-...    79   9e-19
ref|XP_003544578.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-...    79   9e-19

>ref|XP_002516173.1| zinc finger protein, putative [Ricinus communis]
           gi|223544659|gb|EEF46175.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 303

 Score = 80.1 bits (196), Expect(2) = 2e-19
 Identities = 34/49 (69%), Positives = 40/49 (81%)
 Frame = -3

Query: 755 LTNHDEILDKLGPDAECAICKENLLVNDNIQDMSCKHTFHHPCLNPWLD 609
           +T   EIL KLG DAECAICKENL+V+D +Q++ CKHTFH PCL PWLD
Sbjct: 207 ITLTQEILAKLGQDAECAICKENLVVDDKMQELPCKHTFHPPCLKPWLD 255



 Score = 42.0 bits (97), Expect(2) = 2e-19
 Identities = 21/41 (51%), Positives = 22/41 (53%)
 Frame = -2

Query: 525 SCPICRHELRTDDHEYXXXXXXXXXXXXXXXXXANAVRRGE 403
           SCPICRHEL+TDDH Y                 ANAVR GE
Sbjct: 259 SCPICRHELQTDDHAYESWKEREKEAEEERKGAANAVRGGE 299


>ref|XP_002308505.1| predicted protein [Populus trichocarpa] gi|222854481|gb|EEE92028.1|
           predicted protein [Populus trichocarpa]
          Length = 307

 Score = 79.0 bits (193), Expect(2) = 5e-19
 Identities = 33/49 (67%), Positives = 40/49 (81%)
 Frame = -3

Query: 755 LTNHDEILDKLGPDAECAICKENLLVNDNIQDMSCKHTFHHPCLNPWLD 609
           +T  +EIL +LG DAECAICKENL+VND +Q++ CKH FH PCL PWLD
Sbjct: 211 ITITEEILAELGKDAECAICKENLVVNDKMQELPCKHRFHPPCLKPWLD 259



 Score = 42.0 bits (97), Expect(2) = 5e-19
 Identities = 20/41 (48%), Positives = 21/41 (51%)
 Frame = -2

Query: 525 SCPICRHELRTDDHEYXXXXXXXXXXXXXXXXXANAVRRGE 403
           SCPICRHEL+TDDH Y                  NAVR GE
Sbjct: 263 SCPICRHELQTDDHAYESWKEREKEAAEERKGAENAVRGGE 303


>ref|XP_003550230.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-like isoform 1 [Glycine
           max]
          Length = 313

 Score = 78.6 bits (192), Expect(2) = 9e-19
 Identities = 32/49 (65%), Positives = 40/49 (81%)
 Frame = -3

Query: 755 LTNHDEILDKLGPDAECAICKENLLVNDNIQDMSCKHTFHHPCLNPWLD 609
           +T  +EIL  LG DAECAIC+ENL++ND +Q++ CKHTFH PCL PWLD
Sbjct: 217 ITLTEEILANLGKDAECAICRENLVLNDKMQELPCKHTFHPPCLKPWLD 265



 Score = 41.6 bits (96), Expect(2) = 9e-19
 Identities = 19/41 (46%), Positives = 21/41 (51%)
 Frame = -2

Query: 525 SCPICRHELRTDDHEYXXXXXXXXXXXXXXXXXANAVRRGE 403
           SCPICRHEL+TDDH Y                  NA+R GE
Sbjct: 269 SCPICRHELQTDDHAYESWKEREKEAEEERKGAENAIRGGE 309


>ref|XP_003544579.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-like isoform 2 [Glycine
           max]
          Length = 313

 Score = 78.6 bits (192), Expect(2) = 9e-19
 Identities = 32/49 (65%), Positives = 40/49 (81%)
 Frame = -3

Query: 755 LTNHDEILDKLGPDAECAICKENLLVNDNIQDMSCKHTFHHPCLNPWLD 609
           +T  +EIL  LG DAECAIC+ENL++ND +Q++ CKHTFH PCL PWLD
Sbjct: 217 ITLTEEILANLGKDAECAICRENLVLNDKMQELPCKHTFHPPCLKPWLD 265



 Score = 41.6 bits (96), Expect(2) = 9e-19
 Identities = 19/41 (46%), Positives = 21/41 (51%)
 Frame = -2

Query: 525 SCPICRHELRTDDHEYXXXXXXXXXXXXXXXXXANAVRRGE 403
           SCPICRHEL+TDDH Y                  NA+R GE
Sbjct: 269 SCPICRHELQTDDHAYESWKEREKEAEEERKGAENAIRGGE 309


>ref|XP_003544578.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-like isoform 1 [Glycine
           max]
          Length = 313

 Score = 78.6 bits (192), Expect(2) = 9e-19
 Identities = 32/49 (65%), Positives = 40/49 (81%)
 Frame = -3

Query: 755 LTNHDEILDKLGPDAECAICKENLLVNDNIQDMSCKHTFHHPCLNPWLD 609
           +T  +EIL  LG DAECAIC+ENL++ND +Q++ CKHTFH PCL PWLD
Sbjct: 217 ITLTEEILANLGKDAECAICRENLVLNDKMQELPCKHTFHPPCLKPWLD 265



 Score = 41.6 bits (96), Expect(2) = 9e-19
 Identities = 19/41 (46%), Positives = 21/41 (51%)
 Frame = -2

Query: 525 SCPICRHELRTDDHEYXXXXXXXXXXXXXXXXXANAVRRGE 403
           SCPICRHEL+TDDH Y                  NA+R GE
Sbjct: 269 SCPICRHELQTDDHAYESWKEREKEAEEERKGAENAIRGGE 309


Top