BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00016346
         (1803 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   668   0.0  
emb|CBI18448.3| unnamed protein product [Vitis vinifera]              659   0.0  
ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [...   657   0.0  
ref|XP_003549365.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   639   0.0  
ref|NP_178012.2| RNA pseudourine synthase 3 [Arabidopsis thalian...   625   e-177

>ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Vitis
            vinifera]
          Length = 479

 Score =  668 bits (1724), Expect = 0.0
 Identities = 335/480 (69%), Positives = 386/480 (80%), Gaps = 15/480 (3%)
 Frame = +3

Query: 399  MWLNTSLRQCMPF--TVRHFSRVSPPPPDCGESVLRVSNNITHLGCRKAGYKPRQLLSLP 572
            MW N  L +C      VRH+SR++PP P     V+RVSNN+  LG  K G KPRQLLSLP
Sbjct: 1    MWKNV-LHECQGLFPVVRHYSRIAPPRPASAAPVIRVSNNVAQLGSPKEGPKPRQLLSLP 59

Query: 573  QFPSHPLPGKNVPPGS----HITAISWLKYYFADVAGSVIQSHFNKGLVKMECHNAG--- 731
             FP+HPLPGK++   S    H+TAISW+KYYF ++ GSV+QSHFNKGLV ME  N     
Sbjct: 60   PFPAHPLPGKSLVNVSGLPTHVTAISWIKYYFDEIPGSVVQSHFNKGLVHMERSNLDDSS 119

Query: 732  --KQGQTK-LVKIKHNEVMKTGSTIYVPVSVAELKISKRFDTIPSGSLCPNADEIEYLQR 902
              K+GQ K L KIK NEVM+ G+ IYVPVSVAE +ISKRFDTIPSG+L PNADEIEYLQR
Sbjct: 120  LEKEGQIKPLRKIKPNEVMEAGTRIYVPVSVAEARISKRFDTIPSGTLHPNADEIEYLQR 179

Query: 903  LVMYKDSALLVLNKPPKVPVKGNLAVHNSMDXXXXXXXCYDYDEGPKLVHRLDRESSGIL 1082
            LV YKD A+LVLNKPPKVP+KGNL VHNSMD        +DY+EGPKLVHRLDRESSG+L
Sbjct: 180  LVTYKDPAILVLNKPPKVPLKGNLPVHNSMDALAAAALTFDYEEGPKLVHRLDRESSGLL 239

Query: 1083 LMGRSKESISHLHWLFSDANKTKSSLKAWNDACEATYQRFWALVIGTPKEKEGLICAPLT 1262
            LMGR+KES++HLHWLFSD NK KS  KAW+DACEAT QR+WALVIG+PK+KEG+I APL+
Sbjct: 240  LMGRTKESVAHLHWLFSDINKAKSLSKAWDDACEATCQRYWALVIGSPKQKEGVIHAPLS 299

Query: 1263 KVLLNGGKTERVMLAYGSGLEASQEAVTEYRVLGPTISGCSWLELRPLTNHKHQMRVHCA 1442
            KVLL+ GKTERV+LA  SGLEASQEA+TEYRVLGP I+GCSW+EL P T+ KHQ+RVHCA
Sbjct: 300  KVLLDDGKTERVILANQSGLEASQEAITEYRVLGPMINGCSWIELCPRTSRKHQLRVHCA 359

Query: 1443 EALGTPIVGDYKYGWFVHSRWKQMPRADFEPTTGEPYKMRRPDGLAIQKGSVLSKVPLLH 1622
            EALGTPIVGDYKYGWFVH RWKQMPR D EPTTG+PYKMRRP+GL +QKGSVLSKVPLLH
Sbjct: 360  EALGTPIVGDYKYGWFVHRRWKQMPRVDLEPTTGKPYKMRRPEGLDVQKGSVLSKVPLLH 419

Query: 1623 LHCREVVIPNVAKRLEV---QXXXXXXXXXXXLKPDVLRFVASMPSHMKISWNLMSSYLV 1793
            LHCRE+++PN+AK L +   +           LKPD+LRFVASMP+HMKISWNLMSSYLV
Sbjct: 420  LHCRELILPNIAKFLPILDPKPKNQNQYPKLSLKPDILRFVASMPNHMKISWNLMSSYLV 479


>emb|CBI18448.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score =  659 bits (1700), Expect = 0.0
 Identities = 332/482 (68%), Positives = 386/482 (80%), Gaps = 17/482 (3%)
 Frame = +3

Query: 399  MWLNTSLRQCMPF--TVRHFSRVSPPPPDCGESVLRVSNNITHLGCRKAGYKPRQLLSLP 572
            MW N  L +C      VRH+SR++PP P     V+RVSNN+  LG  K G KPRQLLSLP
Sbjct: 1    MWKNV-LHECQGLFPVVRHYSRIAPPRPASAAPVIRVSNNVAQLGSPKEGPKPRQLLSLP 59

Query: 573  QFPSHPLPGKNVPPGS----HITAISWLKYYFADVAGSVIQSHFNKGLVKMECHNAG--- 731
             FP+HPLPGK++   S    H+TAISW+KYYF ++ GSV+QSHFNKGLV ME  N     
Sbjct: 60   PFPAHPLPGKSLVNVSGLPTHVTAISWIKYYFDEIPGSVVQSHFNKGLVHMERSNLDDSS 119

Query: 732  --KQGQTK-LVKIKHNEVMKTGSTIYVPVSVAELKISKRFDTIPSGSLCPNADEIEYLQR 902
              K+GQ K L KIK NEVM+ G+ IYVPVSVAE +ISKRFDTIPSG+L PNADEIEYLQR
Sbjct: 120  LEKEGQIKPLRKIKPNEVMEAGTRIYVPVSVAEARISKRFDTIPSGTLHPNADEIEYLQR 179

Query: 903  L--VMYKDSALLVLNKPPKVPVKGNLAVHNSMDXXXXXXXCYDYDEGPKLVHRLDRESSG 1076
            L  + ++D A+LVLNKPPKVP+KGNL VHNSMD        +DY+EGPKLVHRLDRESSG
Sbjct: 180  LWLLKFQDPAILVLNKPPKVPLKGNLPVHNSMDALAAAALTFDYEEGPKLVHRLDRESSG 239

Query: 1077 ILLMGRSKESISHLHWLFSDANKTKSSLKAWNDACEATYQRFWALVIGTPKEKEGLICAP 1256
            +LLMGR+KES++HLHWLFSD NK KS  KAW+DACEAT QR+WALVIG+PK+KEG+I AP
Sbjct: 240  LLLMGRTKESVAHLHWLFSDINKAKSLSKAWDDACEATCQRYWALVIGSPKQKEGVIHAP 299

Query: 1257 LTKVLLNGGKTERVMLAYGSGLEASQEAVTEYRVLGPTISGCSWLELRPLTNHKHQMRVH 1436
            L+KVLL+ GKTERV+LA  SGLEASQEA+TEYRVLGP I+GCSW+EL P T+ KHQ+RVH
Sbjct: 300  LSKVLLDDGKTERVILANQSGLEASQEAITEYRVLGPMINGCSWIELCPRTSRKHQLRVH 359

Query: 1437 CAEALGTPIVGDYKYGWFVHSRWKQMPRADFEPTTGEPYKMRRPDGLAIQKGSVLSKVPL 1616
            CAEALGTPIVGDYKYGWFVH RWKQMPR D EPTTG+PYKMRRP+GL +QKGSVLSKVPL
Sbjct: 360  CAEALGTPIVGDYKYGWFVHRRWKQMPRVDLEPTTGKPYKMRRPEGLDVQKGSVLSKVPL 419

Query: 1617 LHLHCREVVIPNVAKRLEV---QXXXXXXXXXXXLKPDVLRFVASMPSHMKISWNLMSSY 1787
            LHLHCRE+++PN+AK L +   +           LKPD+LRFVASMP+HMKISWNLMSSY
Sbjct: 420  LHLHCRELILPNIAKFLPILDPKPKNQNQYPKLSLKPDILRFVASMPNHMKISWNLMSSY 479

Query: 1788 LV 1793
            LV
Sbjct: 480  LV 481


>ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223533842|gb|EEF35573.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 468

 Score =  657 bits (1694), Expect = 0.0
 Identities = 325/470 (69%), Positives = 373/470 (79%), Gaps = 5/470 (1%)
 Frame = +3

Query: 399  MWLNTSLRQCMPFTVRHFSRVSPPPPDCGESVLRVSNNITHLGCRKAGYKPRQLLSLPQF 578
            MW N   R+ +    R +SR++PPPP     V+RVSNN+ HLG  K G KPRQLLSLP F
Sbjct: 1    MWKNIYCRRVVS-QGRSYSRIAPPPPAYANPVIRVSNNVAHLGSPKDGPKPRQLLSLPPF 59

Query: 579  PSHPLPGKNVPPGSHITAISWLKYYFADVAGSVIQSHFNKGLVKMECHNAGKQ----GQT 746
            P  PLPG+N    SH+TAISW+KYYF ++  S IQSHFNKGL  +EC N        GQ 
Sbjct: 60   PGLPLPGRN-SMASHVTAISWVKYYFDEILDSAIQSHFNKGLAHIECPNGSGSIEYGGQM 118

Query: 747  KLVKIKHNEVMKTGSTIYVPVSVAELKISKRFDTIPSGSLCPNADEIEYLQRLVMYKDSA 926
             L KIKHN++M+ G+ ++V VSVAE +ISKRFDTIPSG+L PNADEI+YLQRLV YKDSA
Sbjct: 119  SLRKIKHNDIMEAGARVHVAVSVAETRISKRFDTIPSGTLYPNADEIQYLQRLVKYKDSA 178

Query: 927  LLVLNKPPKVPVKGNLAVHNSMDXXXXXXXCYDYDEGPKLVHRLDRESSGILLMGRSKES 1106
            ++VLNKPP++PVKGNL +HNSMD        YDYDEGPKLV RLDRESSG+LLMGR+KES
Sbjct: 179  IIVLNKPPRLPVKGNLPLHNSMDALAAAALSYDYDEGPKLVQRLDRESSGLLLMGRTKES 238

Query: 1107 ISHLHWLFSDANKTKSSLKAWNDACEATYQRFWALVIGTPKEKEGLICAPLTKVLLNGGK 1286
            I HL WLFSD NK+ S  KAWNDAC+ATYQR+WALVIG+PKEKEGLI APL+KVLLN GK
Sbjct: 239  IDHLQWLFSDVNKSNSRCKAWNDACKATYQRYWALVIGSPKEKEGLIRAPLSKVLLNDGK 298

Query: 1287 TERVMLAYGSGLEASQEAVTEYRVLGPTISGCSWLELRPLTNHKHQMRVHCAEALGTPIV 1466
            TERV+LA  SGLEASQEA+TEYRVLGP I+GCSW+ELRPLT+ KHQ+RVHCAEALGTPIV
Sbjct: 299  TERVVLAQHSGLEASQEALTEYRVLGPRINGCSWIELRPLTSRKHQLRVHCAEALGTPIV 358

Query: 1467 GDYKYGWFVHSRWKQMPRADFEPTTGEPYKMRRPDGLAIQKGSVLSKVPLLHLHCREVVI 1646
            GDYKYGW VH RWKQMPR D EP +G+PYK+RRP GL +QKGSVLSKVPLLHLHCRE V+
Sbjct: 359  GDYKYGWCVHQRWKQMPRVDIEPFSGKPYKLRRPAGLDVQKGSVLSKVPLLHLHCREFVL 418

Query: 1647 PNVAKRLEV-QXXXXXXXXXXXLKPDVLRFVASMPSHMKISWNLMSSYLV 1793
            PN+AK L V              KPD+LRFVASMP+HMKISWNLMSSYLV
Sbjct: 419  PNIAKFLAVLNEKSENIHPALDAKPDLLRFVASMPTHMKISWNLMSSYLV 468


>ref|XP_003549365.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Glycine
            max]
          Length = 554

 Score =  639 bits (1648), Expect = 0.0
 Identities = 311/461 (67%), Positives = 369/461 (80%), Gaps = 8/461 (1%)
 Frame = +3

Query: 435  FTVRHFSRVSPPPPDCGESVLRVSNNITHLGCRKAGYKPRQLLSLPQFPSHPLPGKNVPP 614
            F  RH+SR+ PP P   E V+ VSNNI  L   K G KPRQLLSLP FP HPLP K+   
Sbjct: 94   FVARHYSRIQPPRPVSVEPVISVSNNIARLDAPKEGPKPRQLLSLPPFPGHPLPDKSSIS 153

Query: 615  GS----HITAISWLKYYFADVAGSVIQSHFNKGLVKMECHNAGKQGQTKLV---KIKHNE 773
            GS    ++TA++W+KYYF    GSVI+SHF +GLV+ME  ++  Q + ++    KI+ NE
Sbjct: 154  GSRQRDYVTAVNWIKYYFKGTWGSVIESHFREGLVQMEADDSSTQKEEQMKPMRKIRPNE 213

Query: 774  VMKTGSTIYVPVSVAELKISKRFDTIPSGSLCPNADEIEYLQRLVMYKDSALLVLNKPPK 953
            VMK G+ ++VPVS+ E +ISKR+D IPSG+L PNADEI+YLQRLV+YKDSA++VLNKPPK
Sbjct: 214  VMKRGARVHVPVSICETRISKRYDAIPSGTLYPNADEIKYLQRLVIYKDSAIIVLNKPPK 273

Query: 954  VPVKGNLAVHNSMDXXXXXXXCYDYDEGPKLVHRLDRESSGILLMGRSKESISHLHWLFS 1133
            +PVKG+L VHNSMD        YDYDEGPKLVHRLDRESSGILL+GR+K+S+SHL WLFS
Sbjct: 274  LPVKGSLPVHNSMDALAAAALSYDYDEGPKLVHRLDRESSGILLLGRTKDSVSHLQWLFS 333

Query: 1134 DANKTKSSLKAWNDACEATYQRFWALVIGTPKEKEGLICAPLTKVLLNGGKTERVMLAYG 1313
            + N  KSS K WN+ACEATYQR+WALVIGTPKEKEG+I APL+KVLLN GKTER++LA+ 
Sbjct: 334  NINNAKSSCKDWNEACEATYQRYWALVIGTPKEKEGIIHAPLSKVLLNDGKTERIILAHH 393

Query: 1314 SGLEASQEAVTEYRVLGPTISGCSWLELRPLTNHKHQMRVHCAEALGTPIVGDYKYGWFV 1493
            S +E  QEAVTEYRVLGP I+GCSW+ELRPLT  KHQ+RVHCAEALGTPIVGDYKYGWFV
Sbjct: 394  SSVEPRQEAVTEYRVLGPQINGCSWVELRPLTYRKHQLRVHCAEALGTPIVGDYKYGWFV 453

Query: 1494 HSRWKQMPRADFEPTTGEPYKMRRPDGLAIQKGSVLSKVPLLHLHCREVVIPNVAKRLEV 1673
            HSRWKQMPR D EPTTG+PYK+RRP+GL +QKGSVLSKVPLLHLHCRE+V+PN+ K + V
Sbjct: 454  HSRWKQMPRVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIVKFMHV 513

Query: 1674 -QXXXXXXXXXXXLKPDVLRFVASMPSHMKISWNLMSSYLV 1793
                          +PDVLRFVA+MPSHM+ISWNLMSSYLV
Sbjct: 514  LNNSSEELRTSLREQPDVLRFVATMPSHMRISWNLMSSYLV 554


>ref|NP_178012.2| RNA pseudourine synthase 3 [Arabidopsis thaliana]
            gi|75110951|sp|Q5XET6.1|PUS3_ARATH RecName: Full=RNA
            pseudourine synthase 3, mitochondrial; AltName: Full=RNA
            pseudouridylate synthase 3; AltName: Full=RNA-uridine
            isomerase 3; Flags: Precursor gi|53850479|gb|AAU95416.1|
            At1g78910 [Arabidopsis thaliana]
            gi|56790228|gb|AAW30031.1| At1g78910 [Arabidopsis
            thaliana] gi|332198052|gb|AEE36173.1| RNA pseudourine
            synthase 3 [Arabidopsis thaliana]
          Length = 478

 Score =  625 bits (1613), Expect = e-177
 Identities = 309/482 (64%), Positives = 372/482 (77%), Gaps = 17/482 (3%)
 Frame = +3

Query: 399  MW-LNTSLRQC-MPFTVRHFSRVSPPPPDCGESVLRVSNNITHLGCRKAGYKPRQLLSLP 572
            MW   T  RQ  +   +R +SRV+PPP     SV+RV+NN+ HLG  K G  PRQL+SLP
Sbjct: 1    MWKAKTCFRQIYLTVLIRRYSRVAPPP----SSVIRVTNNVAHLGPPKQGPLPRQLISLP 56

Query: 573  QFPSHPLPGKNV-------PPGSHITAISWLKYYFADVAGSVIQSHFNKGLVKME----- 716
             FP HPLPGKN          G H+TAISW+KYYF ++    IQ+HF KGLV+ME     
Sbjct: 57   PFPGHPLPGKNAGADGDDGDSGGHVTAISWVKYYFEEIYDKAIQTHFTKGLVQMEFRGRR 116

Query: 717  -CHNAGKQGQTKLVKIKHNEVMKTGSTIYVPVSVAELKISKRFDTIPSGSLCPNADEIEY 893
                  + G   + KIKHNEVM+ G  I++PVS+AE++ISKR+DTIPSG+L PNADEI Y
Sbjct: 117  DASREKEDGAIPMRKIKHNEVMQIGDKIWLPVSIAEMRISKRYDTIPSGTLYPNADEIAY 176

Query: 894  LQRLVMYKDSALLVLNKPPKVPVKGNLAVHNSMDXXXXXXXCYDYDEGPKLVHRLDRESS 1073
            LQRLV +KDSA++VLNKPPK+PVKGN+ +HNSMD        +  DEGP+LVHRLDRE+S
Sbjct: 177  LQRLVRFKDSAIIVLNKPPKLPVKGNVPIHNSMDALAAAALSFGNDEGPRLVHRLDRETS 236

Query: 1074 GILLMGRSKESISHLHWLFSDANKTKSSLKAWNDACEATYQRFWALVIGTPKEKEGLICA 1253
            G+L+MGR+KESI +LH +FSD     SS KAWN ACEA YQ++WALVIG+PKEKEGLI A
Sbjct: 237  GLLVMGRTKESIDYLHSVFSDYKGRNSSCKAWNKACEAMYQQYWALVIGSPKEKEGLISA 296

Query: 1254 PLTKVLLNGGKTERVMLAYGSGLEASQEAVTEYRVLGPTISGCSWLELRPLTNHKHQMRV 1433
            PL+KVLL+ GKT+RV+LA GSG EASQ+A+TEY+VLGP I+GCSW+ELRP+T+ KHQ+RV
Sbjct: 297  PLSKVLLDDGKTDRVVLAQGSGFEASQDAITEYKVLGPKINGCSWVELRPITSRKHQLRV 356

Query: 1434 HCAEALGTPIVGDYKYGWFVHSRWKQMPRADFEPTTGEPYKMRRPDGLAIQKGSVLSKVP 1613
            HCAEALGTPIVGDYKYGWFVH RWKQMP+ D EPTTG+PYK+RRP+GL +QKGSVLSKVP
Sbjct: 357  HCAEALGTPIVGDYKYGWFVHKRWKQMPQVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVP 416

Query: 1614 LLHLHCREVVIPNVAKRLEVQXXXXXXXXXXXL--KPDVLRFVASMPSHMKISWNLMSSY 1787
            LLHLHCRE+V+PN+AK L V            +  KPD+LRFVASMPSHMKISWNLMSSY
Sbjct: 417  LLHLHCREMVLPNIAKFLHVMNQQETEPLHTGIIDKPDLLRFVASMPSHMKISWNLMSSY 476

Query: 1788 LV 1793
            LV
Sbjct: 477  LV 478