BLASTX nr result

ID: Atractylodes21_contig00016259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00016259
         (1616 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278228.1| PREDICTED: DNA-directed RNA polymerase I sub...   416   e-114
emb|CBI35920.3| unnamed protein product [Vitis vinifera]              410   e-112
ref|XP_004141689.1| PREDICTED: uncharacterized protein LOC101221...   360   6e-97
ref|XP_002521367.1| DNA-directed RNA polymerase I 49 kDa polypep...   352   2e-94
ref|XP_002339506.1| predicted protein [Populus trichocarpa] gi|2...   346   9e-93

>ref|XP_002278228.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA49 [Vitis
            vinifera]
          Length = 421

 Score =  416 bits (1069), Expect = e-114
 Identities = 216/393 (54%), Positives = 283/393 (72%), Gaps = 9/393 (2%)
 Frame = -3

Query: 1374 VDVKIEIVNGSSDKSLPLIGYFPSGYDPEKRRRSEE---PRVRVFKNVKRSNRLQLVVTP 1204
            V+VK+E+V+   +K  PL+GYFPSG+DP K +  E    P V+VF+N  R+NRLQLVV+P
Sbjct: 27   VNVKMEVVHEHPEKIPPLVGYFPSGFDPHKPQDHESDPPPAVKVFRNKARANRLQLVVSP 86

Query: 1203 NHSSPVNFVGTNYSGEAAAPQVCSYSLGVLDKQTQTLKIVHIEANKIFRLEPKFGDQDNA 1024
            N S  VNFVGT+YSGEAA+ QVC+Y+LGVLDK+TQTLKIV I +NKIFRLEP+ G  D +
Sbjct: 87   NDSK-VNFVGTSYSGEAASAQVCTYALGVLDKETQTLKIVPIASNKIFRLEPRVGGSDAS 145

Query: 1023 ADETSKAAENEVTVEDMEAKFN-----FSTXXXXXXXXXXXXXXXXRDPQAQEDLNNKMA 859
             DE S   + E T E+   +       + T                 DP++Q+DL+ K+ 
Sbjct: 146  VDEPSSLLKGEQTAEEKAGRMRDLTNLYGTKKSITQAKKLQALNQKDDPRSQKDLDRKLK 205

Query: 858  DAKVNKEALEVGTATTSSARNIPPHDISATRPQQAYPLEKIIFKGEWRYLLDIAELLQEG 679
            +  +NKEALE  + +  SARNIPP+D +AT PQ+AY L+KIIFKGEW YLLDI +LLQ G
Sbjct: 206  EVVINKEALE--STSAHSARNIPPYDDTATTPQEAYRLDKIIFKGEWDYLLDILDLLQAG 263

Query: 678  RDITPEAYPVFVCNRIHKIQEVKDEDAKESLACIFSYINHLIKFKDKNSMDGFSSAKHHK 499
             ++   AY  FVCNRI K++E++DE  K +LACIFSYINHL+K+KD+NSMD  SSAKHHK
Sbjct: 264  VEVESSAYSSFVCNRIQKLKELEDEGEKTTLACIFSYINHLLKYKDRNSMDA-SSAKHHK 322

Query: 498  LPNILAQKFNDMFA-NPESKRLADDKRDLLISYVLVLTLFVDNFKSEFSDIAKDLRMTTG 322
            +P IL QKF+ MFA + +S+RL ++K+DLLISYVLVLTL+ D F+++ SDIA+DLRM+  
Sbjct: 323  IPGILNQKFSSMFALDSDSRRLTEEKKDLLISYVLVLTLYADEFRTDPSDIARDLRMSAV 382

Query: 321  ALRRHFEFLGCKFIRENSIMLATLPAPLKFPEV 223
             LR HFE LGCK + +N + +ATLP PL FP +
Sbjct: 383  KLRAHFEHLGCKLVSQNKVTMATLPVPLTFPRL 415


>emb|CBI35920.3| unnamed protein product [Vitis vinifera]
          Length = 391

 Score =  410 bits (1055), Expect = e-112
 Identities = 213/389 (54%), Positives = 279/389 (71%), Gaps = 9/389 (2%)
 Frame = -3

Query: 1362 IEIVNGSSDKSLPLIGYFPSGYDPEKRRRSEE---PRVRVFKNVKRSNRLQLVVTPNHSS 1192
            +E+V+   +K  PL+GYFPSG+DP K +  E    P V+VF+N  R+NRLQLVV+PN S 
Sbjct: 1    MEVVHEHPEKIPPLVGYFPSGFDPHKPQDHESDPPPAVKVFRNKARANRLQLVVSPNDSK 60

Query: 1191 PVNFVGTNYSGEAAAPQVCSYSLGVLDKQTQTLKIVHIEANKIFRLEPKFGDQDNAADET 1012
             VNFVGT+YSGEAA+ QVC+Y+LGVLDK+TQTLKIV I +NKIFRLEP+ G  D + DE 
Sbjct: 61   -VNFVGTSYSGEAASAQVCTYALGVLDKETQTLKIVPIASNKIFRLEPRVGGSDASVDEP 119

Query: 1011 SKAAENEVTVEDMEAKFN-----FSTXXXXXXXXXXXXXXXXRDPQAQEDLNNKMADAKV 847
            S   + E T E+   +       + T                 DP++Q+DL+ K+ +  +
Sbjct: 120  SSLLKGEQTAEEKAGRMRDLTNLYGTKKSITQAKKLQALNQKDDPRSQKDLDRKLKEVVI 179

Query: 846  NKEALEVGTATTSSARNIPPHDISATRPQQAYPLEKIIFKGEWRYLLDIAELLQEGRDIT 667
            NKEALE  + +  SARNIPP+D +AT PQ+AY L+KIIFKGEW YLLDI +LLQ G ++ 
Sbjct: 180  NKEALE--STSAHSARNIPPYDDTATTPQEAYRLDKIIFKGEWDYLLDILDLLQAGVEVE 237

Query: 666  PEAYPVFVCNRIHKIQEVKDEDAKESLACIFSYINHLIKFKDKNSMDGFSSAKHHKLPNI 487
              AY  FVCNRI K++E++DE  K +LACIFSYINHL+K+KD+NSMD  SSAKHHK+P I
Sbjct: 238  SSAYSSFVCNRIQKLKELEDEGEKTTLACIFSYINHLLKYKDRNSMDA-SSAKHHKIPGI 296

Query: 486  LAQKFNDMFA-NPESKRLADDKRDLLISYVLVLTLFVDNFKSEFSDIAKDLRMTTGALRR 310
            L QKF+ MFA + +S+RL ++K+DLLISYVLVLTL+ D F+++ SDIA+DLRM+   LR 
Sbjct: 297  LNQKFSSMFALDSDSRRLTEEKKDLLISYVLVLTLYADEFRTDPSDIARDLRMSAVKLRA 356

Query: 309  HFEFLGCKFIRENSIMLATLPAPLKFPEV 223
            HFE LGCK + +N + +ATLP PL FP +
Sbjct: 357  HFEHLGCKLVSQNKVTMATLPVPLTFPRL 385


>ref|XP_004141689.1| PREDICTED: uncharacterized protein LOC101221697 [Cucumis sativus]
            gi|449480549|ref|XP_004155927.1| PREDICTED:
            uncharacterized protein LOC101224839 [Cucumis sativus]
          Length = 435

 Score =  360 bits (924), Expect = 6e-97
 Identities = 196/393 (49%), Positives = 266/393 (67%), Gaps = 9/393 (2%)
 Frame = -3

Query: 1374 VDVKIEIVNGSSDKSLPLIGYFPSGYDPEK---RRRSEEPRVRVFKNVKRSNRLQLVVTP 1204
            +D KI++++    K+ P++GYFPSG+DP K   + +S   R RV+K+  R NR+QLVV+P
Sbjct: 41   MDAKIQVLSNQPQKTPPVVGYFPSGFDPHKDADKEQSRSVRARVYKHKNRPNRMQLVVSP 100

Query: 1203 NHSSPVNFVGTNYSGEAAA-PQVCSYSLGVLDKQTQTLKIVHIEANKIFRLEPKFGDQDN 1027
              S+ V+FVGTNY GEA A  Q C+Y+LGVLDK TQ+LKIV I +N IFRL+PK    D 
Sbjct: 101  TGSN-VDFVGTNYLGEATAGKQHCTYALGVLDKATQSLKIVPIASNMIFRLDPKVRGSDV 159

Query: 1026 AADETSKAAENEVTVEDMEAKFN-----FSTXXXXXXXXXXXXXXXXRDPQAQEDLNNKM 862
              +E+   A  E++ +D   +       + T                 DP+ + DL+ +M
Sbjct: 160  TENESPSVANEELSGQDKANRMRELTALYGTKKSKKQAQKLHALKQEDDPETKSDLDGRM 219

Query: 861  ADAKVNKEALEVGTATTSSARNIPPHDISATRPQQAYPLEKIIFKGEWRYLLDIAELLQE 682
             +  VNKEALE   A    ARNIP ++ SAT PQ+AYPL+KII KGEW +L D+   LQE
Sbjct: 220  KNVVVNKEALEGTQAEV--ARNIPAYNASATTPQEAYPLDKIILKGEWSFLEDLYFRLQE 277

Query: 681  GRDITPEAYPVFVCNRIHKIQEVKDEDAKESLACIFSYINHLIKFKDKNSMDGFSSAKHH 502
              +I+   YP FV NRI+K+Q+++DE+ K+ L CIFSYI HLIK+KD++SM   SSAK H
Sbjct: 278  TAEISA-TYPSFVRNRIYKLQDIQDEEEKKKLCCIFSYITHLIKYKDQHSMGDVSSAKGH 336

Query: 501  KLPNILAQKFNDMFANPESKRLADDKRDLLISYVLVLTLFVDNFKSEFSDIAKDLRMTTG 322
            K+P++L QKF+ MF   ES+RL+ DK +LLIS+VLVL+LF D F S+ +DIAKDLR +  
Sbjct: 337  KIPSMLRQKFSSMFPTAESRRLSADKINLLISHVLVLSLFADEFSSDPADIAKDLRTSPY 396

Query: 321  ALRRHFEFLGCKFIRENSIMLATLPAPLKFPEV 223
             LR HF+ LGCKFIR+N++ LATLP PL+FPE+
Sbjct: 397  DLRLHFDNLGCKFIRKNNLSLATLPIPLQFPEL 429


>ref|XP_002521367.1| DNA-directed RNA polymerase I 49 kDa polypeptide, putative [Ricinus
            communis] gi|223539445|gb|EEF41035.1| DNA-directed RNA
            polymerase I 49 kDa polypeptide, putative [Ricinus
            communis]
          Length = 481

 Score =  352 bits (902), Expect = 2e-94
 Identities = 195/419 (46%), Positives = 268/419 (63%), Gaps = 37/419 (8%)
 Frame = -3

Query: 1374 VDVKIEIVNGSSDKSLPLIGYFPSGYDPEKRRRSE----------------EPRVRVFKN 1243
            ++VKIE++   +DK+ P++GYFPSGY P K   S                 +P V+ ++N
Sbjct: 58   LNVKIEVIYDQTDKTPPIVGYFPSGYKPSKHNESNNLHDTSNEENATSSLSQPSVKFYRN 117

Query: 1242 VKR----------------SNRLQLVVTPNHSSPVNFVGTNYSGEAAAPQVCSYSLGVLD 1111
             +R                S R++LVV+PN S+ V+FVG +Y GEA A Q+C+Y+LGVLD
Sbjct: 118  AQRTKIEKSSNERNEKWRSSERMELVVSPNGSN-VDFVGKSYKGEATAAQLCTYALGVLD 176

Query: 1110 KQTQTLKIVHIEANKIFRLEPKFGDQDNAADETSKAAENEVTVEDMEAKFN-----FSTX 946
            K+T+TLKI+ I  NKIFRLEPK    D +  E S     +++ E+M  +       + T 
Sbjct: 177  KKTKTLKIMPIAGNKIFRLEPKIQGVDASDKEPSVLENEDLSKENMAVRKKTLTDTYGTK 236

Query: 945  XXXXXXXXXXXXXXXRDPQAQEDLNNKMADAKVNKEALEVGTATTSSARNIPPHDISATR 766
                            +P++++DL+ K+ +  VNK ALE  +A    ARNIPPH+ SAT 
Sbjct: 237  KSITQGKRMEIMMQGDNPESRKDLDQKIDNVVVNKAALEDTSAHV--ARNIPPHNTSATT 294

Query: 765  PQQAYPLEKIIFKGEWRYLLDIAELLQEGRDITPEAYPVFVCNRIHKIQEVKDEDAKESL 586
            PQ+AYPL +II  GEW YL D+ E+LQ G      AYPVFV NRIHK++E++DE  +++ 
Sbjct: 295  PQEAYPLGRIILTGEWDYLEDLYEILQAGEGAAINAYPVFVRNRIHKLREIQDEVERKTY 354

Query: 585  ACIFSYINHLIKFKDKNSMDGFSSAKHHKLPNILAQKFNDMFANPESKRLADDKRDLLIS 406
            + IFSYI HL+KFKD +SMDG SSAK+HK P+IL QKF  MF  PES++L  +K DLLIS
Sbjct: 355  SRIFSYITHLLKFKDLHSMDGVSSAKNHKFPSILRQKFMGMF-TPESRKLPVEKIDLLIS 413

Query: 405  YVLVLTLFVDNFKSEFSDIAKDLRMTTGALRRHFEFLGCKFIRENSIMLATLPAPLKFP 229
            YVLVL+L+ D+F+++ +DIAKDLR++   +R HFE LGCK + EN + LATLP PLKFP
Sbjct: 414  YVLVLSLYADDFRTDPTDIAKDLRVSRVMVRTHFENLGCKIVCENKLSLATLPVPLKFP 472


>ref|XP_002339506.1| predicted protein [Populus trichocarpa] gi|222839699|gb|EEE78022.1|
            predicted protein [Populus trichocarpa]
          Length = 472

 Score =  346 bits (888), Expect = 9e-93
 Identities = 188/415 (45%), Positives = 262/415 (63%), Gaps = 32/415 (7%)
 Frame = -3

Query: 1374 VDVKIEIVNGSSDKSLPLIGYFPSGYDPEKRRRSEE-----------PRVRVFKNVKR-- 1234
            +DVK+E+VN   DK+ P++GYFPSGY+P K     +           P V++++N +R  
Sbjct: 54   LDVKLELVNNQVDKTPPVVGYFPSGYNPHKTNDINDAQEPILPLAAPPSVKLYRNAQRAK 113

Query: 1233 --------------SNRLQLVVTPNHSSPVNFVGTNYSGEAAAPQVCSYSLGVLDKQTQT 1096
                          S RL+LVV+PN S+ V FVG +Y GEA A Q+C+Y+LGVLDK TQT
Sbjct: 114  VEKSSGEKNEKGRTSERLELVVSPNGSN-VEFVGNSYKGEAMAAQLCTYALGVLDKATQT 172

Query: 1095 LKIVHIEANKIFRLEPKFGDQDNAADETSKAAENEVTVEDMEAKFN-----FSTXXXXXX 931
            LKI+ I  NKI RLEPK      A  E +     E+T E   A+       +        
Sbjct: 173  LKIMPIAGNKILRLEPKLRGSLAADKEHANFENGEITAEQRAARIRQLNVQYGPKKSIIQ 232

Query: 930  XXXXXXXXXXRDPQAQEDLNNKMADAKVNKEALEVGTATTSSARNIPPHDISATRPQQAY 751
                       DP +Q+DL  K+ +A +NK+ALE  + +  SARNIPP++ SA  PQ+AY
Sbjct: 233  DKKMQALRKGDDPLSQKDLGRKIENAPINKDALE--STSGHSARNIPPYNSSAITPQEAY 290

Query: 750  PLEKIIFKGEWRYLLDIAELLQEGRDITPEAYPVFVCNRIHKIQEVKDEDAKESLACIFS 571
            PL+ II  GEW +L DI ++LQ G ++   AYP FVCNRI K++E++DE  K+ L+CIFS
Sbjct: 291  PLDGIILTGEWDFLEDIYKILQVGGEVASNAYPTFVCNRIQKLREIQDEVEKKRLSCIFS 350

Query: 570  YINHLIKFKDKNSMDGFSSAKHHKLPNILAQKFNDMFANPESKRLADDKRDLLISYVLVL 391
            YI HL+KFKD++SMDG +SA++H+ P+I+ QKF +MF  PE++RL+ DK DLLISYVLVL
Sbjct: 351  YITHLLKFKDQHSMDGAASARNHQFPSIIRQKFFEMF-KPETRRLSVDKIDLLISYVLVL 409

Query: 390  TLFVDNFKSEFSDIAKDLRMTTGALRRHFEFLGCKFIRENSIMLATLPAPLKFPE 226
            TL+ D+F++  +D++ DLRM    ++ H+  LGCK  RE +  L TL  PL+FP+
Sbjct: 410  TLYADDFRTFPADVSNDLRMNPATVKSHYRNLGCKMEREKNKYLVTLSVPLEFPQ 464


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