BLASTX nr result

ID: Atractylodes21_contig00016117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00016117
         (909 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003591952.1| RNA pseudourine synthase [Medicago truncatul...   369   e-100
emb|CBI31488.3| unnamed protein product [Vitis vinifera]              369   e-100
ref|XP_002312025.1| predicted protein [Populus trichocarpa] gi|2...   367   3e-99
ref|XP_003556222.1| PREDICTED: RNA pseudourine synthase 5-like [...   365   1e-98
ref|XP_004143830.1| PREDICTED: RNA pseudourine synthase 5-like [...   364   2e-98

>ref|XP_003591952.1| RNA pseudourine synthase [Medicago truncatula]
           gi|358349060|ref|XP_003638558.1| RNA pseudourine
           synthase [Medicago truncatula]
           gi|355481000|gb|AES62203.1| RNA pseudourine synthase
           [Medicago truncatula] gi|355504493|gb|AES85696.1| RNA
           pseudourine synthase [Medicago truncatula]
          Length = 371

 Score =  369 bits (946), Expect = e-100
 Identities = 183/289 (63%), Positives = 219/289 (75%), Gaps = 1/289 (0%)
 Frame = -1

Query: 909 RTGTELVYHRLPWKEPYAPHLLKVLFEDDHLIALNKPSGLQVLPGGLFQQRTVLTQLQWR 730
           R G++LVYHR+PWKEP APH ++VL+EDD +IALNKPSGLQVLPGGLFQQRTVLTQLQW 
Sbjct: 74  RVGSKLVYHRIPWKEPDAPHTIEVLYEDDDIIALNKPSGLQVLPGGLFQQRTVLTQLQWE 133

Query: 729 IRNQGSVLTDRELCPVPVHRLGRGTSGIXXXXXXXXXXXXXXXXXADKTSAVASNRKINM 550
             N+ ++   ++  PVPVHRLGRGTSGI                 AD TS +      N 
Sbjct: 134 TNNKSTIEAHQKPHPVPVHRLGRGTSGILLCAKTKLARARLASYFADGTSRIEGKGHTNQ 193

Query: 549 GANNGKMSKIYRALACGIINEDEVVIEQPIGTLKYPGVAKGLYVASTSGKPALSKVRVLK 370
               GK++KIYRAL  GIIN D+V I QPIG +KYPGVAKGLYVAS SGKPALS V VL+
Sbjct: 194 EL--GKIAKIYRALVSGIINNDQVTINQPIGMVKYPGVAKGLYVASQSGKPALSVVHVLE 251

Query: 369 RDVQNNLTVVQV-EIQSGRPHQIRIHLSFIGHPLIGDPLYVPGGRPKCSAPETIVEAFAE 193
           R+V+ N T+VQV +IQSGRPHQIRIHLSFIGHPL+GDPLY  GG+PKC   + + E+FAE
Sbjct: 252 RNVKENSTLVQVVKIQSGRPHQIRIHLSFIGHPLLGDPLYAVGGQPKCLDCDFLDESFAE 311

Query: 192 DGGYHRPANPVPGDCGYHLHAYQLVLSHPMTNEVFKITAPLPPVFSSHE 46
           DGGY RP+ PVPGDCGYHLHA++L LSHP+TNE+ ++ APLP +  +HE
Sbjct: 312 DGGYTRPSKPVPGDCGYHLHAHRLFLSHPITNEIIEMIAPLPSILQTHE 360


>emb|CBI31488.3| unnamed protein product [Vitis vinifera]
          Length = 347

 Score =  369 bits (946), Expect = e-100
 Identities = 185/273 (67%), Positives = 213/273 (78%), Gaps = 1/273 (0%)
 Frame = -1

Query: 909 RTGTELVYHRLPWKEPYAPHLLKVLFEDDHLIALNKPSGLQVLPGGLFQQRTVLTQLQWR 730
           R G++LVYHRLPW+EP AP+LL++L+EDD +IALNKPSGLQVLPGGLFQQRTVLTQLQWR
Sbjct: 72  RAGSKLVYHRLPWQEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQQRTVLTQLQWR 131

Query: 729 IRNQGSVLTDRELCPVPVHRLGRGTSGIXXXXXXXXXXXXXXXXXADKTSAVASNRKINM 550
              Q S+   +E   VPVHRLGRGTSGI                 AD TS V  NR  +M
Sbjct: 132 ANKQNSLPACQESHSVPVHRLGRGTSGILLCAKTKLAKTRLAAYFADGTSVVGGNRDADM 191

Query: 549 GANN-GKMSKIYRALACGIINEDEVVIEQPIGTLKYPGVAKGLYVASTSGKPALSKVRVL 373
            +    K+SKIYRAL  GI+++DE+VIEQPIG ++YPGVAKGLYVAS SGKPALSKV +L
Sbjct: 192 KSRTMRKISKIYRALVNGILDKDEIVIEQPIGMVQYPGVAKGLYVASPSGKPALSKVSIL 251

Query: 372 KRDVQNNLTVVQVEIQSGRPHQIRIHLSFIGHPLIGDPLYVPGGRPKCSAPETIVEAFAE 193
           +RDVQ +  +VQVEIQSGRPHQIRIHLSFIGHPL+GDPLYVPGG+PKC   E   E++A 
Sbjct: 252 ERDVQGDHMIVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVPGGQPKCCDAEFTNESYAL 311

Query: 192 DGGYHRPANPVPGDCGYHLHAYQLVLSHPMTNE 94
           DGGY RP  PVPGDCGYHLHA+QLVLSHP TNE
Sbjct: 312 DGGYQRPVKPVPGDCGYHLHAHQLVLSHPTTNE 344


>ref|XP_002312025.1| predicted protein [Populus trichocarpa] gi|222851845|gb|EEE89392.1|
           predicted protein [Populus trichocarpa]
          Length = 377

 Score =  367 bits (941), Expect = 3e-99
 Identities = 188/285 (65%), Positives = 216/285 (75%), Gaps = 2/285 (0%)
 Frame = -1

Query: 909 RTGTELVYHRLPWKEPYAPHLLKVLFEDDHLIALNKPSGLQVLPGGLFQQRTVLTQLQWR 730
           R G ELVYHRLPW+EP AP+LL+VL+EDD ++ALNKP GLQVLPGGLFQQRTVL QLQWR
Sbjct: 82  RDGMELVYHRLPWREPDAPYLLQVLYEDDDMVALNKPPGLQVLPGGLFQQRTVLMQLQWR 141

Query: 729 IRNQGSVLTDRELCPVPVHRLGRGTSGIXXXXXXXXXXXXXXXXXADKTSAVASNRKINM 550
                S L  +   PVPVHRLGRGTSGI                 AD TS +  +   NM
Sbjct: 142 ASKGSSSLAIQGSHPVPVHRLGRGTSGILLCAKTKVAKTSLAAYFADGTSLIGDSSNANM 201

Query: 549 G-ANNGKMSKIYRALACGIINEDEVVIEQPIGTLKYPGVAKGLYVASTSGKPALSKVRVL 373
             +   K+SKIYRAL  GI+N+D+++I+QPIGT++YPGVAKGLYVAS SGKPALSKV VL
Sbjct: 202 EQSKRRKISKIYRALVNGILNQDKIIIKQPIGTMRYPGVAKGLYVASPSGKPALSKVEVL 261

Query: 372 KRDVQNNLTVVQVEIQSGRPHQIRIHLSFIGHPLIGDPLYVPGGRPKCSAPETIVEAFAE 193
           +RD Q N T+VQVEI+SGRPHQIRIHLSFIGHPL+GDPLY  GG+P C   E   E+FAE
Sbjct: 262 ERDSQLNQTLVQVEIESGRPHQIRIHLSFIGHPLLGDPLYDVGGQPMCFDSEHEDESFAE 321

Query: 192 DGGYHRPANPVPGDCGYHLHAYQLVLSHPMTNE-VFKITAPLPPV 61
           DGGY RPA PVPGDCGY+LHA+QLVLSHP  NE V KITAPLP +
Sbjct: 322 DGGYERPAKPVPGDCGYYLHAHQLVLSHPTKNEQVIKITAPLPSI 366


>ref|XP_003556222.1| PREDICTED: RNA pseudourine synthase 5-like [Glycine max]
          Length = 371

 Score =  365 bits (936), Expect = 1e-98
 Identities = 180/288 (62%), Positives = 214/288 (74%)
 Frame = -1

Query: 909 RTGTELVYHRLPWKEPYAPHLLKVLFEDDHLIALNKPSGLQVLPGGLFQQRTVLTQLQWR 730
           R G++L+YHRLPWKEP APH++ VL+EDD +IALNKPSGLQVLPGGL+QQRT+LTQLQW 
Sbjct: 74  RVGSKLIYHRLPWKEPDAPHMIDVLYEDDDMIALNKPSGLQVLPGGLYQQRTILTQLQWE 133

Query: 729 IRNQGSVLTDRELCPVPVHRLGRGTSGIXXXXXXXXXXXXXXXXXADKTSAVASNRKINM 550
             NQG+    + L PVPVHRLGRGTSGI                 AD TS V   R    
Sbjct: 134 ANNQGTCEMHKRLHPVPVHRLGRGTSGILLCAKTKLARARLASHFADGTSHVGGKRDTKQ 193

Query: 549 GANNGKMSKIYRALACGIINEDEVVIEQPIGTLKYPGVAKGLYVASTSGKPALSKVRVLK 370
               GK++K+YRAL  GI+  D+V I QPIG +KYPGVAKGLYVAS SGKPALS V +L+
Sbjct: 194 EL--GKIAKMYRALVSGIVENDKVTINQPIGIVKYPGVAKGLYVASESGKPALSVVDILE 251

Query: 369 RDVQNNLTVVQVEIQSGRPHQIRIHLSFIGHPLIGDPLYVPGGRPKCSAPETIVEAFAED 190
            ++Q N T+VQV+IQSGRPHQIRIHLSFIGHPL+GDPLY  GG+PKC   + + E+FAED
Sbjct: 252 TNIQENSTLVQVKIQSGRPHQIRIHLSFIGHPLLGDPLYGVGGQPKCLDCDFVDESFAED 311

Query: 189 GGYHRPANPVPGDCGYHLHAYQLVLSHPMTNEVFKITAPLPPVFSSHE 46
           GGY RP  PVPGDCGY+LHA++LVLSHP TNE+ +I APLP    + E
Sbjct: 312 GGYQRPTKPVPGDCGYYLHAHKLVLSHPTTNELIEIIAPLPSALHTAE 359


>ref|XP_004143830.1| PREDICTED: RNA pseudourine synthase 5-like [Cucumis sativus]
          Length = 371

 Score =  364 bits (934), Expect = 2e-98
 Identities = 185/296 (62%), Positives = 218/296 (73%), Gaps = 1/296 (0%)
 Frame = -1

Query: 909 RTGTELVYHRLPWKEPYAPHLLKVLFEDDHLIALNKPSGLQVLPGGLFQQRTVLTQLQWR 730
           R G++LVY RLPWKEP  P+LL++L+ED+ +IALNKPSGLQVLPGG+FQQRTVLTQLQW 
Sbjct: 77  RIGSDLVYRRLPWKEPDTPYLLEILYEDNEMIALNKPSGLQVLPGGVFQQRTVLTQLQWW 136

Query: 729 IRNQGSVLTDRELCPVPVHRLGRGTSGIXXXXXXXXXXXXXXXXXADKTSAVASNRKINM 550
              Q S     EL PVPVHRLGRGTSGI                 A+ TS+V  NR   M
Sbjct: 137 SSKQ-SFSVSEELHPVPVHRLGRGTSGILLCAKTKLARTQFAAYFAEGTSSVRRNRNSTM 195

Query: 549 G-ANNGKMSKIYRALACGIINEDEVVIEQPIGTLKYPGVAKGLYVASTSGKPALSKVRVL 373
                 K+SKIYRAL  GII++DEV ++QPIG ++YPGVA+GLYVA+ SGKPA SKV VL
Sbjct: 196 EEGTKRKISKIYRALVTGIIHDDEVSVDQPIGRMQYPGVAQGLYVATPSGKPACSKVNVL 255

Query: 372 KRDVQNNLTVVQVEIQSGRPHQIRIHLSFIGHPLIGDPLYVPGGRPKCSAPETIVEAFAE 193
           +RD Q+  T+VQVEIQSGRPHQIRIHLS IGHPL+GDPLYV GG+P C   E + ++FAE
Sbjct: 256 ERDEQSKHTLVQVEIQSGRPHQIRIHLSSIGHPLVGDPLYVAGGQPNCLHSEVVNQSFAE 315

Query: 192 DGGYHRPANPVPGDCGYHLHAYQLVLSHPMTNEVFKITAPLPPVFSSHELGE*THE 25
           DGGY RP  PVPGDCGY+LHA+QL+L HP TNEV KI APLPP+  +    E  HE
Sbjct: 316 DGGYERPTKPVPGDCGYYLHAHQLILYHPKTNEVVKIIAPLPPILRTRIEAEDVHE 371


Top