BLASTX nr result

ID: Atractylodes21_contig00016042 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00016042
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519473.1| PREDICTED: ribosomal RNA assembly protein mi...    82   3e-31
ref|NP_001241422.1| uncharacterized protein LOC100816856 [Glycin...    82   3e-31
emb|CBI22501.3| unnamed protein product [Vitis vinifera]               81   4e-31
ref|XP_002271394.1| PREDICTED: ribosomal RNA assembly protein mi...    81   4e-31
ref|XP_003617063.1| KRR1 small subunit processome component-like...    79   3e-30

>ref|XP_003519473.1| PREDICTED: ribosomal RNA assembly protein mis3-like [Glycine max]
          Length = 389

 Score = 82.0 bits (201), Expect(2) = 3e-31
 Identities = 39/45 (86%), Positives = 43/45 (95%)
 Frame = +1

Query: 136 QALEILTGCYILVQGNSVASMGSFKGLK*VRRIVEECMWNKMHPL 270
           +ALEILTGCYILVQGN+VA+MGSFKGLK VRRIVEECM NKMHP+
Sbjct: 176 KALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEECMLNKMHPV 220



 Score = 78.2 bits (191), Expect(2) = 3e-31
 Identities = 38/45 (84%), Positives = 41/45 (91%)
 Frame = +3

Query: 3   PQAIKILNDEMQCDIIKIGGLVRNKEKFVKRRQRLVRPRSSTLKA 137
           PQAIKIL+DEMQCDIIKI G+VRNKE+FVKRRQ LV P SSTLKA
Sbjct: 133 PQAIKILDDEMQCDIIKISGMVRNKERFVKRRQHLVGPNSSTLKA 177


>ref|NP_001241422.1| uncharacterized protein LOC100816856 [Glycine max]
           gi|255639399|gb|ACU19995.1| unknown [Glycine max]
          Length = 389

 Score = 82.0 bits (201), Expect(2) = 3e-31
 Identities = 39/45 (86%), Positives = 43/45 (95%)
 Frame = +1

Query: 136 QALEILTGCYILVQGNSVASMGSFKGLK*VRRIVEECMWNKMHPL 270
           +ALEILTGCYILVQGN+VA+MGSFKGLK VRRIVEECM NKMHP+
Sbjct: 176 KALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEECMLNKMHPV 220



 Score = 78.2 bits (191), Expect(2) = 3e-31
 Identities = 38/45 (84%), Positives = 41/45 (91%)
 Frame = +3

Query: 3   PQAIKILNDEMQCDIIKIGGLVRNKEKFVKRRQRLVRPRSSTLKA 137
           PQAIKIL+DEMQCDIIKI G+VRNKE+FVKRRQ LV P SSTLKA
Sbjct: 133 PQAIKILDDEMQCDIIKISGMVRNKERFVKRRQHLVGPNSSTLKA 177


>emb|CBI22501.3| unnamed protein product [Vitis vinifera]
          Length = 424

 Score = 80.9 bits (198), Expect(2) = 4e-31
 Identities = 40/45 (88%), Positives = 41/45 (91%)
 Frame = +3

Query: 3   PQAIKILNDEMQCDIIKIGGLVRNKEKFVKRRQRLVRPRSSTLKA 137
           PQAIKILNDEMQCDIIKIG LVRNKE+FVKRRQ LV P SSTLKA
Sbjct: 164 PQAIKILNDEMQCDIIKIGSLVRNKERFVKRRQHLVGPNSSTLKA 208



 Score = 79.0 bits (193), Expect(2) = 4e-31
 Identities = 36/45 (80%), Positives = 43/45 (95%)
 Frame = +1

Query: 136 QALEILTGCYILVQGNSVASMGSFKGLK*VRRIVEECMWNKMHPL 270
           +ALEILTGCYILVQGN+VA+MGSFKGLK VRR+VE+C+ NKMHP+
Sbjct: 207 KALEILTGCYILVQGNTVAAMGSFKGLKQVRRVVEDCIQNKMHPV 251


>ref|XP_002271394.1| PREDICTED: ribosomal RNA assembly protein mis3-like [Vitis
           vinifera]
          Length = 386

 Score = 80.9 bits (198), Expect(2) = 4e-31
 Identities = 40/45 (88%), Positives = 41/45 (91%)
 Frame = +3

Query: 3   PQAIKILNDEMQCDIIKIGGLVRNKEKFVKRRQRLVRPRSSTLKA 137
           PQAIKILNDEMQCDIIKIG LVRNKE+FVKRRQ LV P SSTLKA
Sbjct: 126 PQAIKILNDEMQCDIIKIGSLVRNKERFVKRRQHLVGPNSSTLKA 170



 Score = 79.0 bits (193), Expect(2) = 4e-31
 Identities = 36/45 (80%), Positives = 43/45 (95%)
 Frame = +1

Query: 136 QALEILTGCYILVQGNSVASMGSFKGLK*VRRIVEECMWNKMHPL 270
           +ALEILTGCYILVQGN+VA+MGSFKGLK VRR+VE+C+ NKMHP+
Sbjct: 169 KALEILTGCYILVQGNTVAAMGSFKGLKQVRRVVEDCIQNKMHPV 213


>ref|XP_003617063.1| KRR1 small subunit processome component-like protein [Medicago
           truncatula] gi|355518398|gb|AET00022.1| KRR1 small
           subunit processome component-like protein [Medicago
           truncatula]
          Length = 424

 Score = 78.6 bits (192), Expect(2) = 3e-30
 Identities = 38/45 (84%), Positives = 41/45 (91%)
 Frame = +3

Query: 3   PQAIKILNDEMQCDIIKIGGLVRNKEKFVKRRQRLVRPRSSTLKA 137
           PQAIK+L+DEMQCDIIKI GLVRNKE+FVKRRQ LV P SSTLKA
Sbjct: 168 PQAIKVLDDEMQCDIIKISGLVRNKERFVKRRQHLVGPNSSTLKA 212



 Score = 78.6 bits (192), Expect(2) = 3e-30
 Identities = 37/45 (82%), Positives = 42/45 (93%)
 Frame = +1

Query: 136 QALEILTGCYILVQGNSVASMGSFKGLK*VRRIVEECMWNKMHPL 270
           +ALEILTGCYILVQGN+V+ MGS+KGLK VRRIVEECM NKMHP+
Sbjct: 211 KALEILTGCYILVQGNTVSVMGSYKGLKQVRRIVEECMLNKMHPV 255


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