BLASTX nr result

ID: Atractylodes21_contig00015992 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00015992
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002880735.1| F-box family protein [Arabidopsis lyrata sub...    65   4e-09
emb|CCD74546.1| F-box family protein [Arabidopsis halleri subsp....    64   1e-08
ref|XP_002300142.1| f-box family protein [Populus trichocarpa] g...    64   2e-08
ref|NP_180173.1| F-box/FBD/LRR-repeat protein [Arabidopsis thali...    62   6e-08
gb|AAN52167.1| hypothetical protein [Arabidopsis thaliana]             62   6e-08

>ref|XP_002880735.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297326574|gb|EFH56994.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 440

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 35/76 (46%), Positives = 48/76 (63%)
 Frame = +2

Query: 2   ISALPDGLLLEILSRLPYTEDAIRTGTLSKRWKYLWTSVPTLIFRHIYADKRPLSGFYSF 181
           IS LPD LL +ILS LP T+D+++T  LSKRW++LW  VP L    +     P   + SF
Sbjct: 6   ISELPDSLLTQILSYLP-TKDSVKTSVLSKRWEFLWLRVPVL---DLKVSNFPEENYASF 61

Query: 182 VDKTLFQSRRSKLRKF 229
           +D  L  +R S++RKF
Sbjct: 62  IDNFLEFNRNSRMRKF 77


>emb|CCD74546.1| F-box family protein [Arabidopsis halleri subsp. halleri]
          Length = 530

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 35/76 (46%), Positives = 48/76 (63%)
 Frame = +2

Query: 2   ISALPDGLLLEILSRLPYTEDAIRTGTLSKRWKYLWTSVPTLIFRHIYADKRPLSGFYSF 181
           IS LPD LL +ILS LP T+D+++T  LSKRW++LW  VP L    +     P   + SF
Sbjct: 95  ISELPDSLLTQILSYLP-TKDSVKTSLLSKRWEFLWLRVPVL---DLKVSDFPDENYASF 150

Query: 182 VDKTLFQSRRSKLRKF 229
           +D  L  +R S++RKF
Sbjct: 151 IDNFLEFNRNSRMRKF 166


>ref|XP_002300142.1| f-box family protein [Populus trichocarpa]
           gi|222847400|gb|EEE84947.1| f-box family protein
           [Populus trichocarpa]
          Length = 481

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 36/76 (47%), Positives = 45/76 (59%)
 Frame = +2

Query: 2   ISALPDGLLLEILSRLPYTEDAIRTGTLSKRWKYLWTSVPTLIFRHIYADKRPLSGFYSF 181
           IS LPD ++  ILS LP  +DAI+T  LSKRW  +WT VP LIFR   +  +    F  F
Sbjct: 47  ISNLPDPIIQHILSFLP-ADDAIKTCILSKRWDSIWTLVPNLIFRRECSCSQEAENFAVF 105

Query: 182 VDKTLFQSRRSKLRKF 229
           VDK L      K++KF
Sbjct: 106 VDKALMHYCSPKVKKF 121


>ref|NP_180173.1| F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
           gi|79323090|ref|NP_001031420.1| F-box/FBD/LRR-repeat
           protein [Arabidopsis thaliana]
           gi|143016455|sp|Q8H1M0.2|FDL16_ARATH RecName:
           Full=F-box/FBD/LRR-repeat protein At2g26030
           gi|3413710|gb|AAC31233.1| hypothetical protein
           [Arabidopsis thaliana] gi|50058977|gb|AAT69233.1|
           hypothetical protein At2g26030 [Arabidopsis thaliana]
           gi|51971321|dbj|BAD44325.1| unknown protein [Arabidopsis
           thaliana] gi|330252692|gb|AEC07786.1|
           F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
           gi|330252693|gb|AEC07787.1| F-box/FBD/LRR-repeat protein
           [Arabidopsis thaliana]
          Length = 442

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 33/76 (43%), Positives = 47/76 (61%)
 Frame = +2

Query: 2   ISALPDGLLLEILSRLPYTEDAIRTGTLSKRWKYLWTSVPTLIFRHIYADKRPLSGFYSF 181
           I  LPD LL ++LS LP T D+++T  LSKRW++LW  VP L    +     P   + SF
Sbjct: 6   ICELPDSLLTQVLSYLP-TIDSVKTSVLSKRWEFLWLRVPVL---DLKVSDFPDENYASF 61

Query: 182 VDKTLFQSRRSKLRKF 229
           +D  L  +R+S++RKF
Sbjct: 62  IDNFLEFNRKSRMRKF 77


>gb|AAN52167.1| hypothetical protein [Arabidopsis thaliana]
          Length = 442

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 33/76 (43%), Positives = 47/76 (61%)
 Frame = +2

Query: 2   ISALPDGLLLEILSRLPYTEDAIRTGTLSKRWKYLWTSVPTLIFRHIYADKRPLSGFYSF 181
           I  LPD LL ++LS LP T D+++T  LSKRW++LW  VP L    +     P   + SF
Sbjct: 6   ICELPDSLLTQVLSYLP-TIDSVKTSVLSKRWEFLWLRVPVL---DLKVSDFPDENYASF 61

Query: 182 VDKTLFQSRRSKLRKF 229
           +D  L  +R+S++RKF
Sbjct: 62  IDNFLEFNRKSRMRKF 77


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