BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00015933
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum ma...    60   2e-07
ref|XP_003538711.1| PREDICTED: DNA-directed RNA polymerase D sub...    59   5e-07
ref|XP_003516687.1| PREDICTED: DNA-directed RNA polymerase D sub...    59   5e-07
ref|XP_003611164.1| DNA-directed RNA polymerase subunit beta [Me...    57   1e-06
gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycope...    56   3e-06

>gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum majus]
          Length = 1112

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/74 (44%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
 Frame = -1

Query: 284 FSLLMAKDFDLS--VSGTQIKRGEFVGLSNPSSCLHEANENIYHYLIKNFRGEEVLEFLH 111
           FS L+  DF+ S   +G  IK GE V  S+ SS L ++ EN++  L+++   E+ L+ LH
Sbjct: 225 FSQLLPLDFEFSNASNGVGIKHGELVSFSDGSSWLRDSGENLFQCLLRHCP-EKTLDILH 283

Query: 110 SAQELLIEWLSMRG 69
           +AQE+L EWLS RG
Sbjct: 284 AAQEVLCEWLSRRG 297


>ref|XP_003538711.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Glycine
           max]
          Length = 1461

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
 Frame = -1

Query: 284 FSLLMAKDFDLSV--SGTQIKRGEFVGLSNPSSCLHEANENIYHYLIKNFRGEEVLEFLH 111
           FS+L+  DFD S    G  +  GE V  S  S  L +++ N++  L+++++G+  L FL+
Sbjct: 552 FSMLLPYDFDYSFPSDGVVVSDGELVSSSEASGWLRDSDYNVFQSLVEHYQGK-TLNFLY 610

Query: 110 SAQELLIEWLSMRGF 66
           +AQ++L EWLSM GF
Sbjct: 611 TAQKVLCEWLSMTGF 625


>ref|XP_003516687.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Glycine
           max]
          Length = 1622

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
 Frame = -1

Query: 284 FSLLMAKDFDLSV--SGTQIKRGEFVGLSNPSSCLHEANENIYHYLIKNFRGEEVLEFLH 111
           FS+L+  DFD S    G  +  GE V  S  S  L +++ N++  L+++++G+  L FL+
Sbjct: 545 FSMLLPYDFDYSFPSDGVVVSDGELVSSSEASGWLRDSDYNVFQSLVEHYQGK-TLNFLY 603

Query: 110 SAQELLIEWLSMRGF 66
           +AQ++L EWLSM GF
Sbjct: 604 AAQKVLCEWLSMTGF 618


>ref|XP_003611164.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
           gi|355512499|gb|AES94122.1| DNA-directed RNA polymerase
           subunit beta [Medicago truncatula]
          Length = 1687

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
 Frame = -1

Query: 284 FSLLMAKDFDLSVSGTQI--KRGEFVGLSNPSSCLHEANENIYHYLIKNFRGEEVLEFLH 111
           FS+L+   FD +     +  K GE +  S  S  L ++  N++  L+++F+G+ +L+ LH
Sbjct: 711 FSMLLPSKFDYAFPSNDVFVKDGELISCSESSGWLRDSENNVFQSLVEHFQGK-ILDVLH 769

Query: 110 SAQELLIEWLSMRGF 66
            AQ+ L EWLSM GF
Sbjct: 770 GAQKALCEWLSMTGF 784


>gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
          Length = 1138

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
 Frame = -1

Query: 284 FSLLMAKDFD--LSVSGTQIKRGEFVGLSNPSSCLHEANENIYHYLIKNFRGEEVLEFLH 111
           FSLL+  D +     +G  I  GE V  S  SS L +A++N+++ L+K+  G + L+ L+
Sbjct: 225 FSLLLPSDLEYVFPSNGVCISEGEIVTSSGGSSWLRDASDNLFYSLVKH-NGGDTLDLLY 283

Query: 110 SAQELLIEWLSMRG 69
           +AQ +L EWLSMRG
Sbjct: 284 AAQTVLCEWLSMRG 297