BLASTX nr result

ID: Atractylodes21_contig00015758 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00015758
         (711 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004158269.1| PREDICTED: LOW QUALITY PROTEIN: endoribonucl...   182   8e-44
emb|CBI20740.3| unnamed protein product [Vitis vinifera]              182   8e-44
ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a...   181   2e-43
emb|CAN66439.1| hypothetical protein VITISV_035236 [Vitis vinifera]   181   2e-43
gb|AEC12444.1| ribonuclease III family protein DCL3 [Gossypium h...   167   1e-39

>ref|XP_004158269.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog
            3a-like [Cucumis sativus]
          Length = 1639

 Score =  182 bits (461), Expect = 8e-44
 Identities = 101/235 (42%), Positives = 145/235 (61%), Gaps = 8/235 (3%)
 Frame = +2

Query: 2    LVSKFVKCKVSSCLELHLTAEQVAKAKCFQELFFNGIFGKLYIHSKESGMARDFLVQTN- 178
            L+SK VK  VS   E+HL AEQ+ KAKCFQELFFNG+FG+L+I SK +G  RDFL+Q + 
Sbjct: 752  LLSKMVKASVSFGGEVHLDAEQITKAKCFQELFFNGLFGRLFIGSKTTGKKRDFLLQKDT 811

Query: 179  QALWNPSYIYXXXXXXXXXXX-----RXXXXXXXXXXXXXXXXKTNSQFRAKKQACDGRI 343
              LW  S +Y                +                K NS   A++    G I
Sbjct: 812  NPLWISSNMYLLLPVDLPDDSTHDLWKIHWRAIDSCVSVVEFLKKNSSLDAERNYGAGAI 871

Query: 344  TTLQGT--DSIMTDSDSADMVHFANKSIHKDNVKDIVVLAIHSGKIYSVIQLLEDATAES 517
            +    +  +S  T S++A ++HFAN  +   ++KD VVLAIH+G+IYS+++++ + +AES
Sbjct: 872  SDSSPSRNNSTETGSNAASVIHFANCVLDVHSLKDRVVLAIHTGRIYSIVEVVSNTSAES 931

Query: 518  PFDGYNGSNPPRFSSFANYYDKKYGIALAYPEQRLLLLKQSHKAHNLLVDFNGEG 682
            PFDG +   PP + +FA+Y++K+YGI+L++P+Q LL LKQSH  HNLLV+F  EG
Sbjct: 932  PFDGNSDKGPPDYITFADYFNKRYGISLSFPKQPLLRLKQSHNPHNLLVNFKDEG 986


>emb|CBI20740.3| unnamed protein product [Vitis vinifera]
          Length = 1688

 Score =  182 bits (461), Expect = 8e-44
 Identities = 102/233 (43%), Positives = 137/233 (58%), Gaps = 6/233 (2%)
 Frame = +2

Query: 2    LVSKFVKCKVSSCLELHLTAEQVAKAKCFQELFFNGIFGKLYIHSKESGMARDFLVQTNQ 181
            L+SKFV+  VSSC ++ L AEQV KA  F ELFFN +FG+L+I SK SG+ R+FL+ T Q
Sbjct: 767  LISKFVRTSVSSCGQVSLDAEQVMKAMRFHELFFNSLFGRLFIGSKSSGVRREFLLNTQQ 826

Query: 182  -ALWNPSYIYXXXXXXXXXXX-----RXXXXXXXXXXXXXXXXKTNSQFRAKKQACDGRI 343
             +LW+ S +Y                R                +  SQ        D   
Sbjct: 827  KSLWSSSNMYLLLPIESSNIPSDESWRINWPGINSCASVVEFLEKRSQLSTGNMNDDTGN 886

Query: 344  TTLQGTDSIMTDSDSADMVHFANKSIHKDNVKDIVVLAIHSGKIYSVIQLLEDATAESPF 523
             +   T  + T+  S   VH AN S+H +N+K++VVLAIH+G+IYS++ ++ D +AESPF
Sbjct: 887  PSPCSTGLVETECKSISTVHLANNSVHVNNLKNMVVLAIHTGRIYSILDVVIDTSAESPF 946

Query: 524  DGYNGSNPPRFSSFANYYDKKYGIALAYPEQRLLLLKQSHKAHNLLVDFNGEG 682
            DG    N   +++FA Y++ KYGI L YP Q LLLLKQSH AHNLLV+FN EG
Sbjct: 947  DGSADVNSSNYTTFAEYFNNKYGIVLMYPGQPLLLLKQSHNAHNLLVNFNDEG 999


>ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a-like [Vitis vinifera]
          Length = 1648

 Score =  181 bits (458), Expect = 2e-43
 Identities = 104/241 (43%), Positives = 141/241 (58%), Gaps = 7/241 (2%)
 Frame = +2

Query: 2    LVSKFVKCKVSSCLELHLTAEQVAKAKCFQELFFNGIFGKLYIHSKESGMARDFLVQTNQ 181
            L+SKFV+  VSSC ++ L AEQV KA  F ELFFN +FG+L+I SK SG+ R+FL+ T Q
Sbjct: 759  LISKFVRTSVSSCGQVSLDAEQVMKAMRFHELFFNSLFGRLFIGSKSSGVRREFLLNTQQ 818

Query: 182  -ALWNPSYIYXXXXXXXXXXX-----RXXXXXXXXXXXXXXXXKTNSQFRAKKQACDGRI 343
             +LW+ S +Y                R                +  SQ        D   
Sbjct: 819  KSLWSSSNMYLLLPIESSNIPSDESWRINWPGINSCASVVEFLEKRSQLSTGNMNDDTGN 878

Query: 344  TTLQGTDSIMTDSDSADMVHFANKSIHKDNVKDIVVLAIHSGKIYSVIQLLEDATAESPF 523
             +   T  + T+  S   VH AN S+H +N+K++VVLAIH+G+IYS++ ++ D +AESPF
Sbjct: 879  PSPCSTGLVETECKSISTVHLANNSVHVNNLKNMVVLAIHTGRIYSILDVVIDTSAESPF 938

Query: 524  DGYNGSNPPRFSSFANYYDKKYGIALAYPEQRLLLLKQSHKAHNLLVDFNGEGILH-GKK 700
            DG    N   +++FA Y++ KYGI L YP Q LLLLKQSH AHNLLV+FN E  L  G+K
Sbjct: 939  DGSADVNSSNYTTFAEYFNNKYGIVLMYPGQPLLLLKQSHNAHNLLVNFNDEDALQTGQK 998

Query: 701  I 703
            +
Sbjct: 999  M 999


>emb|CAN66439.1| hypothetical protein VITISV_035236 [Vitis vinifera]
          Length = 2076

 Score =  181 bits (458), Expect = 2e-43
 Identities = 101/235 (42%), Positives = 137/235 (58%), Gaps = 6/235 (2%)
 Frame = +2

Query: 2    LVSKFVKCKVSSCLELHLTAEQVAKAKCFQELFFNGIFGKLYIHSKESGMARDFLVQTNQ 181
            L+SKFV+  VSSC ++ L AEQV KA  F ELFFN +FG+L+I SK SG+ R+FL+ T Q
Sbjct: 1768 LISKFVRTSVSSCGQVSLDAEQVMKAMXFHELFFNSLFGRLFIGSKSSGVRREFLLNTQQ 1827

Query: 182  -ALWNPSYIYXXXXXXXXXXX-----RXXXXXXXXXXXXXXXXKTNSQFRAKKQACDGRI 343
             +LW+ S +Y                R                +  SQ        D   
Sbjct: 1828 KSLWSSSNMYLLLPIESSNIPSDESWRINWPGINSCASVVEFLEKRSQLSTGNMNDDTGN 1887

Query: 344  TTLQGTDSIMTDSDSADMVHFANKSIHKDNVKDIVVLAIHSGKIYSVIQLLEDATAESPF 523
             +   T  + T+  S   VH AN S+H +N+K++VVLAIH+G+IYS++ ++ D +AESPF
Sbjct: 1888 PSPCSTGLVETECKSISTVHLANNSVHVNNLKNMVVLAIHTGRIYSILDVVIDTSAESPF 1947

Query: 524  DGYNGSNPPRFSSFANYYDKKYGIALAYPEQRLLLLKQSHKAHNLLVDFNGEGIL 688
            DG    N   +++FA Y++ KYGI L YP Q LLLLKQSH AHNLLV+FN E  +
Sbjct: 1948 DGSADVNSSNYTTFAEYFNNKYGIVLMYPGQPLLLLKQSHNAHNLLVNFNDEAYI 2002


>gb|AEC12444.1| ribonuclease III family protein DCL3 [Gossypium hirsutum]
          Length = 1655

 Score =  167 bits (424), Expect = 1e-39
 Identities = 93/231 (40%), Positives = 132/231 (57%), Gaps = 3/231 (1%)
 Frame = +2

Query: 2    LVSKFVKCKVSSCLELHLTAEQVAKAKCFQELFFNGIFGKLYIHSKESGMARDFLVQTN- 178
            L+ K VK  VSSC ++ L AEQ+ KAK FQE FFNG+FGKL++ SK SG  R+FL++   
Sbjct: 764  LIGKMVKASVSSCGQVRLNAEQMMKAKRFQEFFFNGLFGKLFVGSKSSGAPREFLLRDKT 823

Query: 179  QALWNPS--YIYXXXXXXXXXXXRXXXXXXXXXXXXXXXXKTNSQFRAKKQACDGRITTL 352
             +LW+PS  Y+            R                  NS    ++    G   +L
Sbjct: 824  SSLWSPSRMYLLLPLEDNSTDELRIHWPGITACTLAAEFLNKNSLLGTEQSDDGGSNPSL 883

Query: 353  QGTDSIMTDSDSADMVHFANKSIHKDNVKDIVVLAIHSGKIYSVIQLLEDATAESPFDGY 532
              T S +TD    +++ FAN S+  +++++ VVLAIH+G+IY +I+ + D TAES F   
Sbjct: 884  NSTGSPVTDCKETNIIRFANSSVDANSLRNTVVLAIHTGRIYCIIEAVSDKTAESSFAET 943

Query: 533  NGSNPPRFSSFANYYDKKYGIALAYPEQRLLLLKQSHKAHNLLVDFNGEGI 685
              +    F++F  Y+ KKY I L +P Q L+LLKQSH  HNLLV+FN EG+
Sbjct: 944  VDTVSSEFANFYEYFYKKYNIVLKHPGQPLMLLKQSHNPHNLLVNFNDEGV 994


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