BLASTX nr result

ID: Atractylodes21_contig00015372 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00015372
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004157424.1| PREDICTED: ATP-dependent Clp protease adapte...   115   3e-24
ref|XP_004137466.1| PREDICTED: ATP-dependent Clp protease adapte...   115   3e-24
ref|NP_564937.1| ATP-dependent Clp protease adaptor protein ClpS...   112   2e-23
ref|NP_001077794.1| ATP-dependent Clp protease adaptor protein C...   112   2e-23
ref|XP_002888676.1| hypothetical protein ARALYDRAFT_894639 [Arab...   112   3e-23

>ref|XP_004157424.1| PREDICTED: ATP-dependent Clp protease adapter protein ClpS-like
           [Cucumis sativus]
          Length = 158

 Score =  115 bits (289), Expect = 3e-24
 Identities = 56/88 (63%), Positives = 65/88 (73%)
 Frame = +2

Query: 41  METAIRGRVALSPNHGVFHSKPGDRYLLHKQSTNWHIFMTLASARLEKGGGVLDKPVIEK 220
           ME AI GRV LSPN     +KPGD+Y  HKQ  N    M ++ A L KGGG+L+KP IEK
Sbjct: 1   MEAAICGRVPLSPNQFFTSTKPGDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPTIEK 60

Query: 221 TTPGRESEFDLRKSRKMAPPYREMLHND 304
           TTPGRESEFD+RKSRK +PPYR +LHND
Sbjct: 61  TTPGRESEFDVRKSRKTSPPYRVLLHND 88


>ref|XP_004137466.1| PREDICTED: ATP-dependent Clp protease adapter protein ClpS-like
           [Cucumis sativus]
          Length = 158

 Score =  115 bits (289), Expect = 3e-24
 Identities = 56/88 (63%), Positives = 65/88 (73%)
 Frame = +2

Query: 41  METAIRGRVALSPNHGVFHSKPGDRYLLHKQSTNWHIFMTLASARLEKGGGVLDKPVIEK 220
           ME AI GRV LSPN     +KPGD+Y  HKQ  N    M ++ A L KGGG+L+KP IEK
Sbjct: 1   MEAAICGRVPLSPNQFFTSTKPGDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPAIEK 60

Query: 221 TTPGRESEFDLRKSRKMAPPYREMLHND 304
           TTPGRESEFD+RKSRK +PPYR +LHND
Sbjct: 61  TTPGRESEFDVRKSRKTSPPYRVLLHND 88


>ref|NP_564937.1| ATP-dependent Clp protease adaptor protein ClpS [Arabidopsis
           thaliana] gi|5734712|gb|AAD49977.1|AC008075_10 ESTs
           gb|T41781 and gb|AA586096 come from this gene
           [Arabidopsis thaliana]
           gi|12484207|gb|AAG54002.1|AF336921_1 unknown protein
           [Arabidopsis thaliana] gi|15010628|gb|AAK73973.1|
           At1g68660/F24J5_4 [Arabidopsis thaliana]
           gi|21464569|gb|AAM52239.1| At1g68660/F24J5_4
           [Arabidopsis thaliana] gi|21553930|gb|AAM63011.1|
           unknown [Arabidopsis thaliana]
           gi|332196703|gb|AEE34824.1| ATP-dependent Clp protease
           adaptor protein ClpS [Arabidopsis thaliana]
          Length = 159

 Score =  112 bits (281), Expect = 2e-23
 Identities = 61/90 (67%), Positives = 74/90 (82%), Gaps = 2/90 (2%)
 Frame = +2

Query: 41  METAIRGRVALSPNHGVFHSKPGDRYLLHK-QSTNWHIFMTLA-SARLEKGGGVLDKPVI 214
           METAI GR+AL+P+  +F+SK GD++L+ K    N  I MTL+ SA L KGGGVLDKP+I
Sbjct: 1   METAICGRLALAPS-SLFNSKSGDKHLVSKGPCVNRSILMTLSTSAALGKGGGVLDKPII 59

Query: 215 EKTTPGRESEFDLRKSRKMAPPYREMLHND 304
           EKTTPGRESEFDLRKS+K+APPYR +LHND
Sbjct: 60  EKTTPGRESEFDLRKSKKIAPPYRVILHND 89


>ref|NP_001077794.1| ATP-dependent Clp protease adaptor protein ClpS [Arabidopsis
           thaliana] gi|332196704|gb|AEE34825.1| ATP-dependent Clp
           protease adaptor protein ClpS [Arabidopsis thaliana]
          Length = 129

 Score =  112 bits (281), Expect = 2e-23
 Identities = 61/90 (67%), Positives = 74/90 (82%), Gaps = 2/90 (2%)
 Frame = +2

Query: 41  METAIRGRVALSPNHGVFHSKPGDRYLLHK-QSTNWHIFMTLA-SARLEKGGGVLDKPVI 214
           METAI GR+AL+P+  +F+SK GD++L+ K    N  I MTL+ SA L KGGGVLDKP+I
Sbjct: 1   METAICGRLALAPS-SLFNSKSGDKHLVSKGPCVNRSILMTLSTSAALGKGGGVLDKPII 59

Query: 215 EKTTPGRESEFDLRKSRKMAPPYREMLHND 304
           EKTTPGRESEFDLRKS+K+APPYR +LHND
Sbjct: 60  EKTTPGRESEFDLRKSKKIAPPYRVILHND 89


>ref|XP_002888676.1| hypothetical protein ARALYDRAFT_894639 [Arabidopsis lyrata subsp.
           lyrata] gi|297334517|gb|EFH64935.1| hypothetical protein
           ARALYDRAFT_894639 [Arabidopsis lyrata subsp. lyrata]
          Length = 159

 Score =  112 bits (280), Expect = 3e-23
 Identities = 60/90 (66%), Positives = 74/90 (82%), Gaps = 2/90 (2%)
 Frame = +2

Query: 41  METAIRGRVALSPNHGVFHSKPGDRYLLHK-QSTNWHIFMTLAS-ARLEKGGGVLDKPVI 214
           METAI GR+AL+P+  +F+SK GD++L+ K    N  + MTL++ A L KGGGVLDKP+I
Sbjct: 1   METAICGRLALAPS-SLFNSKSGDKHLVSKGPCVNRGVLMTLSTYAALGKGGGVLDKPII 59

Query: 215 EKTTPGRESEFDLRKSRKMAPPYREMLHND 304
           EKTTPGRESEFDLRKS+KMAPPYR +LHND
Sbjct: 60  EKTTPGRESEFDLRKSKKMAPPYRVILHND 89


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